Jie:LabNotes/CpgSeq/2009-8-4

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SNP_ASM analysis in different tissue types[edit]

SNP_ASM analysis in three cell types derived from one denor[edit]

The input file from expresso.chem.ucsd.edu/kunpaired/SNPOLD/SNP_ASM_PGP1L, SNP_ASM_PGP1F, SNP_ASM_PGP1iPS. 
The code is SNP_ASM_PGP1
The output file is SNP_ASM_PGP1_3_cell

SNP_ASM analysis in 4 fibroblast cell lines[edit]

The input file is PGP1F, IMR90, BJ, hFib2.
SNP_ASM_fibroblast
output file SNP_ASM_4_fibroblast