Editing
Ns126:Calendar/NOTES/2015-6-26
(section)
Jump to navigation
Jump to search
Warning:
You are not logged in. Your IP address will be publicly visible if you make any edits. If you
log in
or
create an account
, your edits will be attributed to your username, along with other benefits.
Anti-spam check. Do
not
fill this in!
===Methylation Haplotype based on PBMC dataset=== <gallery widths=400px heights=400px> File:GSE35069.wb.pmbc.cd4.8.19.jpg| Figure 5. PCA Analysis to GSE35069: Genome-wide DNA methylation profile for PBMC, CD4+, CD8+ and other cell types in human blood. File:GSE42861.PC12.Status.Gender.jpg| Figure 6. PCA Analysis to GSE42861: Differential DNA methylation in the PBMC from 354 Rheumatoid arthritis and 337 normal.It is very interesting that disease status is not the largest difference among the dataset while gender is the most obvious soucre of the variance or difference. </gallery> <gallery widths=400px heights=300px> File:GSE35069.HDRC.Distribution.Density.jpg| Figure 7. The distribution of the correlations of high density of CpG region in methylation 450K beadchips in Havard Age Project of PBMC Dataset. Normal Samples File:GSE42861.HDRC.Distribution.Density.jpg| Figure 8. The distribution of the correlations of high density of CpG region in methylation 450K beadchips in RA PBMC dataset. Normal Samples </gallery> *Shared High HDRC regions by CD4+ T cells, CD8+ T cells, CD56+ NK cells, CD19+ B cells, CD14+ monocytes, neutrophils, and eosinophils cells were attached in [[File:GSE35069.Share.High.HDRC.0.6.bed.txt]]. Binomial test showed there is no any region was over-preferred, indicating these regions were conservative in different elements of the whole blood cells. In this analysis, P=0.34, in another way, the probability for each region in each sample was 0.34. *Shared High HDRC regions by rheumatoid arthritis and normal were attached *[[File:GSE42861.Share.High.HDRC.0.6.bed.txt]]
Summary:
Please note that all contributions to ZhangLabWiki may be edited, altered, or removed by other contributors. If you do not want your writing to be edited mercilessly, then do not submit it here.
You are also promising us that you wrote this yourself, or copied it from a public domain or similar free resource (see
ZhangLabWiki:Copyrights
for details).
Do not submit copyrighted work without permission!
Cancel
Editing help
(opens in new window)
Navigation menu
Personal tools
Not logged in
Talk
Contributions
Create account
Log in
Namespaces
Page
Discussion
English
Views
Read
Edit
View history
More
Search
Navigation
Main Page
Current events
Recent changes
Random page
Investigators
Matt Cai
Song Chen
Eric Chu
Dinh Diep
Elizabeth Duong
Shicheng Guo
Alan Fung
Daniel Jacobsen
Blue Lake
Huy Lam
Alice Li
Andrew Richards
Brandon Sos
Chris Wei
Yan Wu
Kun Zhang
Tools
What links here
Related changes
Special pages
Page information