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====Comments==== *There are several issue with this batch of data: First, based on the SeqMonk coverage plot, DNA amplification is extremely sparse, and the cross-talk among different reactors is stronger. The latter could be also due to the read mapping. *Second, there isn't clear evidence of big DNA molecules separated into individual reactors. *Third, the clonal rate is much higher, which is probably also due to the poor amplification. *Overall, there is something wrong with this experiment, either due to slow/incomplete mixing, or low KOH concentration. *The next experiment needs to be design carefully to distinguish these two.
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