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==2010== {| {{table}} | align="center" style="background:#f0f0f0;"|'''Run''' | align="center" style="background:#f0f0f0;"|'''Tracking''' | align="center" style="background:#f0f0f0;"|'''1st Cycle Report''' | align="center" style="background:#f0f0f0;"|'''Summary''' | align="center" style="background:#f0f0f0;"|'''% Good Clusters''' | align="center" style="background:#f0f0f0;"|'''Yield (kbases)''' |- |- | 100101_HL031||[[Media:100101_HL031_Tracking.pdf|Tracking]]||[[Media:100101_HL031_FBase.pdf|FBase]]||[[Media:100101_HL031_Summary.pdf|Summary]]||?||Failed, overloaded, focusing laser |- |- | 100105_HL032||[[Media:100105_HL032_Tracking.pdf|Tracking]]||[[Media:100105_HL032_FBase.pdf|FBase]]||[[Media:100105_HL032_Summary.pdf|Summary]]||61.24||2,940,492 |- |- | 100113_HL033||[[Media:100113_HL033_Tracking.pdf|Tracking]]||[[Media:100113_HL033_FBase.pdf|FBase]]||[[Media:100113_HL033_Summary.pdf|Summary]]||?||? |- |- | 100117_HL034||[[Media:100117_HL034_Tracking.pdf|Tracking]]||[[Media:100117_HL034_FBase.pdf|FBase]]||[[Media:100117_HL034_Summary.pdf|Summary]]||72.28||6,896,056 |- |- | 100123_HL035||[[Media:100123_HL035_Tracking.pdf|Tracking]]||[[Media:100123_HL035_FBase.pdf|FBase]]||[[Media:100123_HL035_Summary.pdf|Summary]]||74,49||9,045,278 |- |- | 100127_HL036||[[Media:100127_HL036_Tracking.pdf|Tracking]]||[[Media:100127_HL036_FBase.pdf|FBase]]||[[Media:100127_HL036_Summary.pdf|Summary]]||69.07||7,518,218 |- |- | 100221_HL037||[[Media:100201_HL037_Tracking.pdf|Tracking]]||[[Media:100201_HL037_FBase.pdf|FBase]]||[[Media:100201_HL037_Summary.pdf|Summary]]||51.39||5,993,304 |- | 100207_HL038||[[Media:100207_HL038_Tracking.pdf|Tracking]]||[[Media:100207_HL038_FBase.pdf|FBase]]||[[Media:100207_HL038_Summary.pdf|Summary]]||82.62||11,587,982 |- | 100212_HL039||[[Media:100212_HL039_Tracking.pdf|Tracking]]||[[Media:100212_HL039_FBase.pdf|FBase]]||[[Media:100212_HL039_Summary.pdf|Summary]]||53.7||5,163,203 |- |- | 100219_HL040||[[Media:100219_HL040_Tracking.pdf|Tracking]]||[[Media:100219_HL040_FBase.pdf|FBase]]||[[Media:100219_HL040_Summary.pdf|Summary]]||59.35||6,091,535 |- |- | 100226_HL041||[[Media:100226_HL041_Tracking.pdf|Tracking]]||[[Media:100226_HL041_FBase.pdf|FBase]]||[[Media:100226_HL041_Summary.pdf|Summary]]||71.02||11,153,313 |- |- | 100303_HL042||[[Media:100303_HL042_Tracking.pdf|Tracking]]||[[Media:100303_HL042_FBase.pdf|FBase]]||[[Media:100303_HL042_Summary.pdf|Summary]]||68.17||7,113,883 |- |- | 100305_HL043||[[Media:100305_HL043_Tracking.pdf|Tracking]]||[[Media:100305_HL043_FBase.pdf|FBase]]||[[Media:100305_HL043_Summary.pdf|Summary]]||61.8||8,949,130 |- |- | 100309_HL044||[[Media:100309_HL044_Tracking.pdf|Tracking]]||[[Media:100309_HL044_FBase.pdf|FBase]]||[[Media:100309_HL044_Summary.pdf|Summary]]||73.91||6,019,006 |- |- | 100312_HL045||[[Media:100312_HL045_Tracking.pdf|Tracking]]||[[Media:100312_HL045_FBase.pdf|FBase]]||[[Media:100312_HL045_Summary.pdf|Summary]]||81.68||14,577,361 |- |- | 100318_HL046_2||[[Media:100318_HL046_2_Tracking.pdf|Tracking]]||[[Media:100318_HL046_2_FBase.pdf|FBase]]||[[Media:100318_HL046_2_Summary.pdf|Summary]]||13||Failed(focusing??) |- |- | 100318_HL046_3||[[Media:100318_HL046_Tracking.pdf|Tracking]]||[[Media:100318_HL046_FBase.pdf|FBase]]||[[Media:100318_HL046_Summary.pdf|Summary]]||36.4||3,481,844(overloaded) |- |- | 100326_HL047||[[Media:100326_HL047_Tracking.pdf|Tracking]]||[[Media:100326_HL047_FBase.pdf|FBase]]||[[Media:100326_HL047_Summary.pdf|Summary]]||80.56||15,102,359 |- |- | 100329_HL048||[[Media:100329_HL048_Tracking.pdf|Tracking]]||[[Media:100329_HL048_FBase.pdf|FBase]]||[[Media:100329_HL048_Summary.pdf|Summary]]||76.02||6,467,724(38bp,wrong flowcell orientation) |- |- | 100329_HL048_repeat||[[Media:100329_HL048_Tracking.pdf|Tracking]]||[[Media:100329_HL048_repeat_FBase.pdf|FBase]]||[[Media:100329_HL048_repeat_Summary.pdf|Summary]]||80.94||16,728,503 |- |- | 100329_DD001||[[Media:100329_DD001.pdf|Tracking]]||[[Media:100329_DD001_FBase.pdf|FBase]]||[[Media:100329_DD001_Summary.pdf|Summary]]||?||Ran 4 complete cycles, ended because of low quality and intensity |- |- | 100329_DD001_repeat||[[Media:100329_DD001.pdf|Tracking]]||[[Media:100329_DD001_FBase_repeat.pdf|FBase]]||[[Media:100329_DD001_Summary.pdf|Summary]]||87.04||5,765,966(flowcell underloaded) |- |- | 100411_HL049_2||[[Media:100411_HL049_2.pdf|Tracking]]||[[Media:100411_HL049_2_FBase_repeat.pdf|FBase]]||[[Media:100411_HL049_2_Summary.pdf|Summary]]||71.04||8,624,535(defective primer lawn) |- |- | 100415_HL050||[[Media:100415_HL050.pdf|Tracking]]||[[Media:100415_HL050_FBase_repeat.pdf|FBase]]||[[Media:100415_HL050_Summary.pdf|Summary]]||83.14||13,132,725 |- |- | 100420_HL051||[[Media:100420_HL051.pdf|Tracking]]||[[Media:100420_HL051_FBase_repeat.pdf|FBase]]||[[Media:100420_HL051_Summary.pdf|Summary]]||89.86||2,839,513 |- |- | 100424_DD002||[[Media:100424_DD002.pdf|Tracking]]||[[Media:100424_DD002_FBase.pdf|FBase]]||[[Media:100424_DD002_Summary.pdf|Summary]]|| || Ran 24 cycles, Scott said software restarts at 25th and 50th cycles, and was a connection problem regarding problem with re-accessing the recipe file (primary Run folder was stored in network drive instead of D drive. Intensities were low (below 2000 for all lanes), probably due to using primers not from Illumina. |- | 100425_DD002_reprimed||[[Media:100425_DD002_reprimed.pdf|Tracking]]||[[Media:100425_DD002_FBase_reprimed.pdf|FBase]]||[[Media:100425_DD002_Summary.pdf|Summary]]|| || Reprimed with standard Illumina primers. |- |- | 100429_HL052||[[Media:100429_HL052.pdf|Tracking]]||[[Media:100429_HL052_FBase.pdf|FBase]]||[[Media:100429_HL052_Summary.pdf|Summary]]||85.95||1,175,185 |- |- | 100503_HL053||[[Media:100503_HL053.pdf|Tracking]]||[[Media:100503_HL053_FBase.pdf|FBase]]||[[Media:100503_HL053_Summary.pdf|Summary]]||80.52||31,007,707 |- |- | 100514_HL054||[[Media:100514_HL054.pdf|Tracking]]||[[Media:100514_HL054_FBase.pdf|FBase]]||[[Media:100514_HL054_Summary.pdf|Summary]]||89.93||32,835,688 |- |- | 100523_HL055||[[Media:100523_HL055.pdf|Tracking]]||[[Media:100523_HL055_FBase.pdf|FBase]]||[[Media:100523_HL05_Summary.pdf|Summary]]||83.12||15775525(2nd reads failed, low intensity) |- |- | 100601_HL056||[[Media:100601_HL056.pdf|Tracking]]||[[Media:100601_HL056_FBase.pdf|FBase]]||[[Media:100601_HL056_Summary.pdf|Summary]]||84.17||17,156,595 |- |- | 100605_HL057||[[Media:100605_HL057.pdf|Tracking]]||[[Media:100605_HL057_FBase.pdf|FBase]]||[[Media:100605_HL057_Summary.pdf|Summary]]||88.53||6,862,886 |- |- | 100612_HL058||[[Media:100612_HL058.pdf|Tracking]]||[[Media:100612_HL058_FBase.pdf|FBase]]||[[Media:100612_HL058_Summary.pdf|N/A]]||N/A||Overloading and Low Cluster Density |- |- | 100615_HL058_2||[[Media:100615_HL058_2.pdf|Tracking]]||[[Media:100615_HL058_2_FBase.pdf|FBase]]||[[Media:100615_HL058_2_Summary.pdf|Summary]]||62.83||5,242,825 |- |- | 100623_HL059||[[Media:100623_HL059.pdf|Tracking]]||[[Media:100623_HL059_FBase.pdf|FBase]]||[[Media:100623_HL059_Summary.pdf|N/A]]||?||Failed (Low Cluster Density) |- |- | 100627_HL060||[[Media:100627_HL060.pdf|Tracking]]||[[Media:100627_HL060_FBase.pdf|FBase]]||[[Media:100627_HL060_Summary.pdf|Summary]]||?||? |- |- | 100630_HL061||[[Media:100630_HL061.pdf|Tracking]]||[[Media:100630_HL061_FBase.pdf|FBase]]||[[Media:100630_HL061_Summary.pdf|Summary]]||?||Stopped due to low number of clusters |- |- | 100701_HL061_2||[[Media:100701_HL061_2.pdf|Tracking]]||[[Media:100701_HL061_2_FBase.pdf|FBase]]||[[Media:100701_HL061_2_Summary.pdf|Summary]]||?||Defected flowcell |- |- | 100703_HL061_3||[[Media:100703_HL061_3.pdf|Tracking]]||[[Media:100703_HL061_3_FBase.pdf|FBase]]||[[Media:100703_HL061_3_Summary.pdf|Summary]]||89.5||11,854,572 |- |- | 100707_HL062||[[Media:100707_HL062.pdf|Tracking]]||[[Media:100707_HL062_FBase.pdf|FBase]]||[[Media:100707_HL062_Summary.pdf|Summary]]||91.52||5,171,211 |- |- | 100713_HL063||[[Media:100713_HL063.pdf|Tracking]]||[[Media:100713_HL063_FBase.pdf|FBase]]||[[Media:100713_HL063_Summary.pdf|Summary]]||91.19||12,767,919 |- |- | 100717_HL064||[[Media:100717_HL064.pdf|Tracking]]||[[Media:100717_HL064_FBase.pdf|FBase]]||[[Media:100717_HL064_Summary.pdf|Summary]]||87.4||11,306,633 |- |- | 100721_HL065||[[Media:100721_HL065.pdf|Tracking]]||[[Media:100721_HL065_FBase.pdf|FBase]]||[[Media:100721_HL065_Summary.pdf|Summary]]||87.48||12,959,289 |- |- | 100726_HL066||[[Media:100726_HL066.pdf|Tracking]]||[[Media:100726_HL066_FBase.pdf|FBase]]||[[Media:100726_HL066_Summary.pdf|Summary]]||61.5||9,875,407 (Low yield due to bad focusing, mainly on lane 5) |- |- | 100802_HL067||[[Media:100802_HL067.pdf|Tracking]]||[[Media:100802_HL067_FBase.pdf|FBase]]||[[Media:100802_HL067_Summary.pdf|Summary]]||64.16||5,816,951 (Overloaded lane 1 & 2 due to underestimation of library concentration) |- |- | 100807_HL068||[[Media:100807_HL068.pdf|Tracking]]||[[Media:100807_HL068_FBase.pdf|FBase]]||[[Media:100807_HL068_Summary.pdf|Summary]]||87.07||10,732,349 |- |- | 100814_HL069||[[Media:100814_HL069.pdf|Tracking]]||[[Media:100814_HL069_FBase.pdf|FBase]]||[[Media:100814_HL069_Summary.pdf|Summary]]||77.39||8,878,272 |- |- | 100817_HL070||[[Media:100817_HL070.pdf|Tracking]]||[[Media:100817_HL070_FBase.pdf|FBase]]||[[Media:100817_HL070_Summary.pdf|Summary]]||90.53||10,797,519 |- |- | 100825_HL071||[[Media:100825_HL071.pdf|Tracking]]||[[Media:100825_HL071_FBase.pdf|FBase]]||[[Media:100825_HL071_Summary.pdf|Summary]]||83.15||11,955,485 |- |- | 100913_HL072||[[Media:100913_HL072.pdf|Tracking]]||[[Media:100913_HL072_FBase.pdf|FBase]]||[[Media:100913_HL072_Summary.pdf|Summary]]||86.49||4,533,300 (No Clusters on lane 7 & 8) |- |- | 100917_HL073||[[Media:100917_HL073.pdf|Tracking]]||[[Media:100917_HL073_FBase.pdf|FBase]]||[[Media:100917_HL073_Summary.pdf|Summary]]||86.46||6,258,409 |- |- | 100921_HL074||[[Media:100921_HL074.pdf|Tracking]]||[[Media:100921_HL074_FBase.pdf|FBase]]||[[Media:100921_HL074_Summary.pdf|Summary]]||81.22||10,415,353 |- |- | 100925_HL075||[[Media:100925_HL075.pdf|Tracking]]||[[Media:100925_HL075_FBase.pdf|FBase]]||[[Media:100925_HL075_Summary.pdf|Summary]]||80.98||29,364,373 |- |- | 101006_HL076||[[Media:101006_HL076.pdf|Tracking]]||[[Media:HL076 first base.pdf|FBase]]||[[Media:101006_HL076_Summary.pdf|Summary]]||87.84||8,005,306 |- |- | 100810_DD003||[[Media:100810_DD003_corrected.pdf|Tracking]]||[[Media:DD003 first base.pdf|FBase]]||[[Media:101008_DD003_Summary.pdf|Summary]]||89.08||12821744 |- |- | 100812_AL009||[[Media:100812_AL009_corrected.pdf|Tracking]]||[[Media:AL009 first base.pdf|FBase]]||[[Media:101012_AL009_Summary.pdf|Summary]]||86.91||15,843,582 |- |- | 101016_HL077||[[Media:101016_HL077.pdf|Tracking]]||[[Media:101016_HL077_FBase.pdf|FBase]]||[[Media:101016_HL077_Summary.pdf|Summary]]||86.02||16,771,454 |- |- | 101021_HL078||[[Media:101021_HL078.pdf|Tracking]]||[[Media:101021_HL078_FBase.pdf|FBase]]||[[Media:101021_HL078_Summary.pdf|Summary]]||?||? |- |- | 101026_HL079||[[Media:101026_HL079.pdf|Tracking]]||[[Media:101026_HL079_FBase.pdf|FBase]]||[[Media:101026_HL079_Summary.pdf|Summary]]||61.61||12,414,871 |- |- | 101030_HL080||[[Media:101030_HL080.pdf|Tracking]]||[[Media:101030_HL080_FBase.pdf|FBase]]||[[Media:101030_HL080_Summary.pdf|Summary]]||78.26||13,909,754 |- |- | 101108_HL081||[[Media:101108_HL081.pdf|Tracking]]||[[Media:101108_HL081_FBase.pdf|FBase]]||[[Media:101108_HL081_Summary.pdf|Summary]]||86.06||43,250,579 |- |- | 101117_HL082||[[Media:101117_HL082.pdf|Tracking]]||[[Media:101117_HL082_FBase.pdf|FBase]]||[[Media:101117_HL082_Summary.pdf|Summary]]||81.99||19,504,189 |- |- | 101123_HL083||[[Media:101123_HL083.pdf|Tracking]]||[[Media:101123_HL083_FBase.pdf|FBase]]||[[Media:101123_HL083_Summary.pdf|Summary]]||87.92||45,478,237 |- |- | 101203_HL084||[[Media:101203_HL084.pdf|Tracking]]||[[Media:101203_HL084_FBase.pdf|FBase]]||[[Media:101203_HL084_Summary.pdf|Summary]]||87.07||21,585,694 |- |- | 101209_HL085||[[Media:101209_HL085.pdf|Tracking]]||[[Media:101209_HL085_FBase.pdf|FBase]]||[[Media:101209_HL085_Summary.pdf|Summary]]||86.69||45,305,249 |- | |}
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