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==additional public datasets== *Previous studies will be used in my analysis to cross check my results: *GSE30206: Methylation profiling by high throughput sequencing "DNA-binding factors shape the mouse methylome at distal regulatory regions" *GSE57179: Whole-genome single-base resolution methyl-C sequencing "Abnormalities in human pluripotent cells due to reprogramming mechanisms" *GSE41923: Whole-genome bisulfite sequencing of two distinct interconvertible DNA methylomes of mouse embryonic stem cells **GSM1027571 DNA_Methylation_serum_LIF_E14 [http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1027571 link] **GSM1027572 DNA_Methylation_E14_adapted_2i [http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1027572 link] **GSM1127953 DNA_Methylation_E14_serum_LIF_replica [http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1127953 link] **GSM1127954 DNA_Methylation_E14_adapted_2i_replica [http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1127954 link] *Related dataset not used in my analysis: **GSE53060: Illumina HumanMethylation450 BeadChip array "Abnormalities in human pluripotent cells due to reprogramming mechanisms" **GSE61461: Illumina HumanMethylation450 BeadChip array "Comparable frequencies of coding mutations and loss of imprinting in human pluripotent cells derived by nuclear transfer and defined factors" **GSE53094: RNA-seq "Abnormalities in human pluripotent cells due to reprogramming mechanisms" **GSE61656: RNA-seq "Comparable frequencies of coding mutations and loss of imprinting in human pluripotent cells derived by nuclear transfer and defined factors"
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