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=== Down-sampling of the Habibi and Stadler ESC data === * From visual inspection, Alice noticed that many ESC vs SCNT/IPS DMRs have coverage only in Habibi/Stadler data. * Downsample Habibi data to 30% and Stadler data to 70%. * ESC vs SCNT # DMRs %of previous total DMR called M1 10720 48% M2 5049 33% M3 4904 32% * ESC vs IPS # DMRs %of previous total DMR called M1 11542 52% M2 7622 38% M3 8632 43% * From this, we decided that since currently MOABs does not consider replicates information, we need to do individual ESCs comparisons A) AL.Indx11 vs SCNT/IPS B) TO.mESC vs SCNT/IPS C) ST.mESC vs SCNT/IPS
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