Editing
Matt:LabNotes/2015-11-15
(section)
Jump to navigation
Jump to search
Warning:
You are not logged in. Your IP address will be publicly visible if you make any edits. If you
log in
or
create an account
, your edits will be attributed to your username, along with other benefits.
Anti-spam check. Do
not
fill this in!
==Number of Rolonies per Nuclei== *Results are in C:\Users\Matt\Documents\RolonyImages\11-11-2015\20151029_BA8_DARTFISHsuppv2_20XDecoding\Aligned\BA8_suppv2_2015-10-29\Excels **Update wiki later with graphs *Note: 20X Decoding (with 0.75 NA) is not good enough **In 9 positions equaling 2.677mm^2 ***Decoded 6,908 rolonies (and this includes double counting rolonies of overlapping regions) ***225 genes ***178 genes > 3 counts **In [[Matt:LabNotes/2015-9-2 | 4 positions of 63X decoding]] equaling 0.1354mm^2 ***Decoded 1,641 rolonies using 3D Decoding (~10% more than 2D Decoding) ***That would be >30,000 rolonies in 2.677mm^2 *Maybe try a 40X 1.3NA objective? **Especially for mouse embryo project ***292um FOV should be enough to fit each embryo section ***1.3NA should be high enough resolution for 3D Decoding
Summary:
Please note that all contributions to ZhangLabWiki may be edited, altered, or removed by other contributors. If you do not want your writing to be edited mercilessly, then do not submit it here.
You are also promising us that you wrote this yourself, or copied it from a public domain or similar free resource (see
ZhangLabWiki:Copyrights
for details).
Do not submit copyrighted work without permission!
Cancel
Editing help
(opens in new window)
Navigation menu
Personal tools
Not logged in
Talk
Contributions
Create account
Log in
Namespaces
Page
Discussion
English
Views
Read
Edit
View history
More
Search
Navigation
Main Page
Current events
Recent changes
Random page
Investigators
Matt Cai
Song Chen
Eric Chu
Dinh Diep
Elizabeth Duong
Shicheng Guo
Alan Fung
Daniel Jacobsen
Blue Lake
Huy Lam
Alice Li
Andrew Richards
Brandon Sos
Chris Wei
Yan Wu
Kun Zhang
Tools
What links here
Related changes
Special pages
Page information