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{{ AGLabEntry|2009-8-18|2009-8-22 }} =TO DO= * Email Sanjay Nigam - kidney methylation studies * End-to-End Mapping with Trimming; test this approach. * Hemophilia - Read over CEGS proposal =Exome Resequencing= ==IPS and Cancer== * Check new DF699 and Foreskin Fibroblast Data ===AL001 Set=== * Very few reads present; not able to draw anything from this. ===AL002 Set=== * New set, contains Foreskin-DF699 pair and CraigVenter-IPS pair * Need to run analysis; do we need to trim? ** Check this. * Currently running on genome-miner:/media/TmpStore2 (TmpStore1 is low on space, need to delete some of the old not-working analysis) ==PGP Data== * Analyze merged PGP4, 6, and 10 data - need to postprocess * Phylogenetic Tree clustering of PGP and Shendure samples =Probe Design= * Baylor Probe Set is currently running on genome-tech. * Jay Lee Probeset ** dbSNP Probes are done ** Need to run separate job on cDNA targets ** Make sure conversion script still works...check if we can add the same values?
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