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==2013== ==Jan-Jun== {| {{table}} | align="center" style="background:#f0f0f0;"|'''Date''' | align="center" style="background:#f0f0f0;"|'''Run''' | align="center" style="background:#f0f0f0;"|'''Lane''' | align="center" style="background:#f0f0f0;"|'''Tube Label''' | align="center" style="background:#f0f0f0;"|'''Seq facility''' | align="center" style="background:#f0f0f0;"|'''Read length''' | align="center" style="background:#f0f0f0;"|'''# filtered reads (bps)''' |- | 130402_HL149||HL149||S1||JG-Mix||Zhang Lab||36+7||N/A |- | 130402_HL149||HL149||S2||JG-Mix||Zhang Lab||36+7||N/A |- | 130402_HL149||HL149||S3||JG-Mix||Zhang Lab||36+7||N/A |- | 130402_HL149||HL149||S4||JG-Mix||Zhang Lab||36+7||N/A |- | 130402_HL149||HL149||S5||JG-Mix||Zhang Lab||36+7||N/A |- | 130402_HL149||HL149||S6||JG-Mix||Zhang Lab||36+7||N/A |- | 130402_HL149||HL149||S7||JG-Mix||Zhang Lab||36+7||N/A |- | 130402_HL149||HL149||S8||JG-Mix||Zhang Lab||36+7||N/A |- | MiseqApr02||MiseqApr02||S1||JG-ecoli-37,38-Mar18||Palsson Lab||100+7+100||N/A |- | MiseqApr02||MiseqApr02||S1||JG-seabac-39,40-Mar18||Palsson Lab||100+7+100||N/A |- | HiSeqMar27||HiSeqMar27||S1||BS-IVT-R4-Feb25||Biogem||50+7||N/A |- | HiSeqMar27||HiSeqMar27||S2||BS-IVT-R52R6test-Mar21||Biogem||50+7||N/A |- | HiSeqMar27||HiSeqMar27||S3||BS-IVT-R52R6test-Mar21||Biogem||50+7||N/A |- | HiSeqMar27||HiSeqMar27||S4||BS-IVT-R6_redo-Mar26||Biogem||50+7||N/A |- | MiSeqMar22||MiSeqMar22||S1||NP-BSPP-H1_TAB_47_48-Mar10||Palsson Lab||150+7+150||N/A |- | MiSeqMar22||MiSeqMar22||S1||PhiX Control||Palsson Lab||150+7+150||N/A |- | 130321_HL148||HL148||S1||JG-Mix||Zhang Lab||36+7||N/A |- | 130321_HL148||HL148||S2||JG-Mix||Zhang Lab||36+7||N/A |- | 130321_HL148||HL148||S3||JG-Mix||Zhang Lab||36+7||N/A |- | 130321_HL148||HL148||S4||JG-Mix||Zhang Lab||36+7||N/A |- | 130321_HL148||HL148||S5||JG-Mix||Zhang Lab||36+7||N/A |- | 130321_HL148||HL148||S6||JG-Mix||Zhang Lab||36+7||N/A |- | 130321_HL148||HL148||S7||JG-Mix||Zhang Lab||36+7||N/A |- | 130321_HL148||HL148||S8||JG-Mix||Zhang Lab||36+7||N/A |- | 130316_HL147||HL147||S1||JG-Down-41,46-Mar11||Zhang Lab||36+7||N/A |- | 130316_HL147||HL147||S2||JG-Down-42,43-Mar11||Zhang Lab||36+7||N/A |- | 130316_HL147||HL147||S3||JG-NeuN--41,42-Mar13||Zhang Lab||36+7||N/A |- | 130316_HL147||HL147||S4||JG-Down-47,48-Mar11||Zhang Lab||36+7||N/A |- | 130316_HL147||HL147||S5||JG-Alz-41,42-Mar11||Zhang Lab||36+7||N/A |- | 130316_HL147||HL147||S6||JG-Alz-43,44-Mar11||Zhang Lab||36+7||N/A |- | 130316_HL147||HL147||S7||JG-Alz-45,46-Mar11||Zhang Lab||36+7||N/A |- | 130316_HL147||HL147||S8||JG-Alz-47,48-Mar11||Zhang Lab||36+7||N/A |- | 130306_HL146||HL146||S1||JG/BS Mix||Zhang Lab||36+7||1,259,418,000 |- | 130306_HL146||HL146||S2||JG/BS Mix||Zhang Lab||36+7||1,336,904,000 |- | 130306_HL146||HL146||S3||JG/BS Mix||Zhang Lab||36+7||1,366,457,000 |- | 130306_HL146||HL146||S4||BS-R6rarecell-61_72-Mar5||Zhang Lab||36+7||1,338,509,000 |- | 130306_HL146||HL146||S5||BS-R6rarecell-61_72-Mar5||Zhang Lab||36+7||1,327,433,000 |- | 130306_HL146||HL146||S6||BS-R6rarecell-61_72-Mar5||Zhang Lab||36+7||1,281,809,000 |- | 130306_HL146||HL146||S7||BS-R6rarecell-61_72-Mar5||Zhang Lab||36+7||1,214,865,000 |- | 130306_HL146||HL146||S8||BS-R6rarecell-61_72-Mar5||Zhang Lab||36+7||1,113,161,000 |- | 130227_HL145||HL145||S1||JG-Mix||Zhang Lab||36+7+36||1,196,605,000 |- | 130227_HL145||HL145||S2||JG-Mix||Zhang Lab||36+7+36||1,080,700,000 |- | 130227_HL145||HL145||S3||JG-Mix||Zhang Lab||36+7+36||1,224,235,000 |- | 130227_HL145||HL145||S4||NP-SkinMB-N2_Ind17_88-Feb07||Zhang Lab||36+7+36||1,218,834,000 |- | 130227_HL145||HL145||S5||JG-Mix||Zhang Lab||36+7+36||369,672,000 |- | 130227_HL145||HL145||S6||JG-Mix||Zhang Lab||36+7+36||1,028,602,000 |- | 130227_HL145||HL145||S7||CW/JG-Mix||Zhang Lab||36+7+36||1,544,049,000 |- | 130227_HL145||HL145||S8||JG-Mix||Zhang Lab||36+7+36||891,453,000 |- | 130306_HL146||HL146||S1||JG/BS Mix||Zhang Lab||36+7||N/A |- | 130306_HL146||HL146||S2||JG/BS Mix||Zhang Lab||36+7||N/A |- | 130306_HL146||HL146||S3||JG/BS Mix||Zhang Lab||36+7||N/A |- | 130306_HL146||HL146||S4||BS-R6rarecell-61_72-Mar5||Zhang Lab||36+7||N/A |- | 130306_HL146||HL146||S5||BS-R6rarecell-61_72-Mar5||Zhang Lab||36+7||N/A |- | 130306_HL146||HL146||S6||BS-R6rarecell-61_72-Mar5||Zhang Lab||36+7||N/A |- | 130306_HL146||HL146||S7||BS-R6rarecell-61_72-Mar5||Zhang Lab||36+7||N/A |- | 130306_HL146||HL146||S8||BS-R6rarecell-61_72-Mar5||Zhang Lab||36+7||N/A |- | 130227_HL145||HL145||S1||JG-Mix||Zhang Lab||36+7+36||N/A |- | 130227_HL145||HL145||S2||JG-Mix||Zhang Lab||36+7+36||N/A |- | 130227_HL145||HL145||S3||JG-Mix||Zhang Lab||36+7+36||N/A |- | 130227_HL145||HL145||S4||NP-SkinMB-N2_Ind17_88-Feb07||Zhang Lab||36+7+36||N/A |- | 130227_HL145||HL145||S5||JG-Mix||Zhang Lab||36+7+36||N/A |- | 130227_HL145||HL145||S6||JG-Mix||Zhang Lab||36+7+36||N/A |- | 130227_HL145||HL145||S7||CW/JG-Mix||Zhang Lab||36+7+36||N/A |- | 130227_HL145||HL145||S8||JG-Mix||Zhang Lab||36+7+36||N/A |- | 130227_HiSeqFeb27||HiSeqFeb27||S1||BS-IVT-R4_49_52,56_58-Feb25||Biogem||51+7||N/A |- | 130227_HiSeqFeb27||HiSeqFeb27||S2||BS-IVT-R5_49_53,56_60-Feb25||Biogem||51+7||N/A |- | 130219||HL144||S1||NP/RL-Mix||Zhang Lab||50+7+50||N/A |- | 130219||HL144||S2||RL-capRNA-mixed-Feb15||Zhang Lab||50+7+50||N/A |- | 130219||HL144||S3||JG-Seabac-Mix-Feb6||Zhang Lab||50+7+50||N/A |- | 130219||HL144||S4||JG-EC-Mix-Feb11||Zhang Lab||50+7+50||N/A |- | 130219||HL144||S5||JG-Mix||Zhang Lab||50+7+50||N/A |- | 130219||HL144||S6||BS-IVT-R4_49_52,55-58-Jan23||Zhang Lab||50+7+50||Failed to cluster |- | 130219||HL144||S7||BS-IVT-R4_49_52,55-58-Jan23||Zhang Lab||50+7+50||Failed to cluster |- | 130219||HL144||S8||BS-IVT-R4_49_52,55-58-Jan23||Zhang Lab||50+7+50||Failed to cluster |- | 130207||HL143||S1||BS-IVT-R4_49_52,55_58-Jan23||Zhang Lab||50+7||Failed to cluster |- | 130207||HL143||S2||BS-IVT-R4_49_52,55_58-Jan23||Zhang Lab||50+7||Failed to cluster |- | 130207||HL143||S3||BS-IVT-R4_49_52,55_58-Jan23||Zhang Lab||50+7||Failed to cluster |- | 130207||HL143||S4||BS-IVT-R4_49_52,55_58-Jan23||Zhang Lab||50+7||Failed to cluster |- | 130207||HL143||S5||BS-IVT-R4_49_52,55_58-Jan23||Zhang Lab||50+7||Failed to cluster |- | 130207||HL143||S6||BS/JG Mix||Zhang Lab||50+7||N/A |- | 130207||HL143||S7||JG Mix||Zhang Lab||50+7||N/A |- | 130207||HL143||S8||JG Mix||Zhang Lab||50+7||N/A |- | 130205||MiseqFeb05||S1||JG-EC,Seabac-44,45-Jan24||Palson Lab||300||N/A |- | 130205||MiseqFeb05||S1||JG-Seabac-35-Jan31||Palson Lab||300||N/A |- | 130205||MiseqFeb05||S1||JG-Seabac-39-Jan31||Palson Lab||300||N/A |- | 130205||MiseqFeb05||S1||JG-Seabac-40-Jan31||Palson Lab||300||N/A |- | 130205||MiseqFeb05||S1||JG-Seabac-41-Jan31||Palson Lab||300||N/A |- | 130205||MiseqFeb05||S1||JG-Seabac-42-Jan31||Palson Lab||300||N/A |- | 130128||HL142||S1||BS-IVT-R4_49_52,55_58-Jan23||Zhang Lab||36+7||N/A |- | 130128||HL142||S2||BS-IVT-R4_49_52,55_58-Jan23||Zhang Lab||36+7||N/A |- | 130128||HL142||S3||BS-IVT-R4_49_52,55_58-Jan23||Zhang Lab||36+7||N/A |- | 130128||HL142||S4||BS-IVT-R4_49_52,55_58-Jan23||Zhang Lab||36+7||N/A |- | 130128||HL142||S5||JG-Mix||Zhang Lab||36+7||N/A |- | 130128||HL142||S6||JG-LymphNeuN-43,45-Jan22||Zhang Lab||36+7||N/A |- | 130128||HL142||S7||JG-Mix||Zhang Lab||36+7||N/A |- | 130128||HL142||S8||JG-Lymph-35,36-Jan22||Zhang Lab||36+7||N/A |- | 130119||HL141||S1||RL-UniRef-totoRNA-Jan16||Zhang Lab||50+8||N/A |- | 130119||HL141||S2||JG-Mix||Zhang Lab||50+8||N/A |- | 130119||HL141||S3||JG/BL-Mix||Zhang Lab||50+8||N/A |- | 130119||HL141||S4||NP/JG-Mix||Zhang Lab||50+8||N/A |- | 130119||HL141||S5||JG/RL-Mix||Zhang Lab||50+8||N/A |- | 130119||HL141||S6||JG-EC/lymph-Mix-Jan10/Jan15||Zhang Lab||50+8||N/A |- | 130119||HL141||S7||JG-Neun/EC-Mix-Jan11/Jan10||Zhang Lab||50+8||N/A |- | 130119||HL141||S8||JG-Neun/Alzcor-Mix-Dec9||Zhang Lab||50+8||N/A |} ==2012== ===Jul-Dec=== {| {{table}} | align="center" style="background:#f0f0f0;"|'''Date''' | align="center" style="background:#f0f0f0;"|'''Run''' | align="center" style="background:#f0f0f0;"|'''Lane''' | align="center" style="background:#f0f0f0;"|'''Tube Label''' | align="center" style="background:#f0f0f0;"|'''Seq facility''' | align="center" style="background:#f0f0f0;"|'''Read length''' | align="center" style="background:#f0f0f0;"|'''# filtered reads (bps)''' |- | 121222||HL140||S1||BS/AL-Mix||Zhang Lab||80+7+80||N/A |- | 121222||HL140||S2||RL-totoRNA-DSN-Dec20||Zhang Lab||80+7+80||N/A |- | 121222||HL140||S3||RL-KE-totoRNA_Chrx-Dec6||Zhang Lab||80+7+80||N/A |- | 121222||HL140||S4||RL-KE-totoRNA_Chrx-Dec6||Zhang Lab||80+7+80||N/A |- | 121222||HL140||S5||RL-KE-totoRNA_Chrx-Dec6||Zhang Lab||80+7+80||N/A |- | 121222||HL140||S6||RL-KE-totoRNA_Chrx-Dec6||Zhang Lab||80+7+80||N/A |- | 121222||HL140||S7||RL-KE-totoRNA_Chrx-Dec6||Zhang Lab||80+7+80||N/A |- | 121218||HL139||S8||RL-KE-totoRNA_Chrx-Dec6||Zhang Lab||80+7+80||N/A |- | 121218||HL139||S1||HL-Dip-shTDG_1_3-Dec17||Zhang Lab||36+7||N/A |- | 121218||HL139||S2||HL-Dip-shTDG_1_3-Dec17||Zhang Lab||36+7||N/A |- | 121218||HL139||S3||HL-Dip-shTDG_4_6-Dec17||Zhang Lab||36+7||N/A |- | 121218||HL139||S4||HL-Dip-shTDG_4_6-Dec17||Zhang Lab||36+7||N/A |- | 121218||HL139||S5||HL-Dip-shCont_7_9-Dec17||Zhang Lab||36+7||N/A |- | 121218||HL139||S6||HL-Dip-shCont_7_9-Dec17||Zhang Lab||36+7||N/A |- | 121218||HL139||S7||HL-Dip-shCont_10_12-Dec17/BS-Mix||Zhang Lab||36+7||N/A |- | 121218||HL139||S8||HL-Dip-shCont_10_12-Dec17/BS-Mix||Zhang Lab||36+7||N/A |- |- | 121214||HL138||S1||RL-KE-totoRNA_Chrx-Dec6||Zhang Lab||80+7||N/A |- | 121214||HL138||S2||RL-KE-totoRNA_Chrx-Dec6||Zhang Lab||80+7||N/A |- | 121214||HL138||S3||RL-KE-totoRNA_Chrx-Dec6||Zhang Lab||80+7||N/A |- | 121214||HL138||S4||RL-KE-totoRNA_Chrx-Dec6||Zhang Lab||80+7||N/A |- | 121214||HL138||S5||RL-KE-totoRNA_Chrx-Dec6||Zhang Lab||80+7||N/A |- | 121214||HL138||S6||RL-KE-totoRNA_Chrx-Dec6||Zhang Lab||80+7||N/A |- | 121214||HL138||S7||BS-Acc-NXTA_55_64-Nov19||Zhang Lab||80+7||N/A |- | 121214||HL138||S8||BS-Acc-NXTA_55_64-Nov19||Zhang Lab||80+7||N/A |- | 121210||HL137_2||S1||BS-Acc-NXTA_55_64-Nov19||Zhang Lab||36+7||1,210,858,000 |- | 121210||HL137_2||S2||BS-Acc-Mix||Zhang Lab||36+7||1,321,790,000 |- | 121210||HL137_2||S3||BS-Acc-NXTA_55_64-Nov19||Zhang Lab||36+7||1,243,330,000 |- | 121210||HL137_2||S4||BS-Acc-NXTA_55_64-Nov19||Zhang Lab||36+7||1,260,609,000 |- | 121210||HL137_2||S5||AR-Ly-Mix-Nov21||Zhang Lab||36+7||494,864,000 |- | 121210||HL137_2||S6||AR-Mix-Nov21||Zhang Lab||36+7||954,098,000 |- | 121210||HL137_2||S7||AR-Ctl+,Alzctx+-36,37-Nov21||Zhang Lab||36+7||756,925,000 |- | 121210||HL137_2||S8||AR-Alzctx+-38,39-Nov21||Zhang Lab||36+7||617,812,000 |- | 121130||HL137||S1||AR-Ly-Mix-Nov21||Zhang Lab||36+7||N/A |- | 121130||HL137||S2||AR-Mix-Nov21||Zhang Lab||36+7||N/A |- | 121130||HL137||S3||AR-Ctl+,Alzctx+-36,37-Nov21||Zhang Lab||36+7||N/A |- | 121130||HL137||S4||AR-Alzctx+-38,39-Nov21||Zhang Lab||36+7||N/A |- | 121130||HL137||S5||BS-Acc-NXTA_55_64-Nov19||Zhang Lab||36+7||N/A |- | 121130||HL137||S6||BS-Acc-NXTA_55_64-Nov19||Zhang Lab||36+7||N/A |- | 121130||HL137||S7||BS-Acc-NXTA_55_64-Nov19||Zhang Lab||36+7||N/A |- | 121130||HL137||S8||BS-Acc-NXTA_55_64-Nov19||Zhang Lab||36+7||N/A |- | 121120||HL136||S1||AR-Mix-Oct||Zhang Lab||60+7||2,010,000 |- | 121120||HL136||S2||AR-Mix-Oct/Nov||Zhang Lab||60+7||24,761,000 |- | 121120||HL136||S3||AR/JG-Mix-Oct/Nov||Zhang Lab||60+7||1,467,327,000 |- | 121120||HL136||S4||AR-Mix-Nov||Zhang Lab||60+7||1,444,656,000 |- | 121120||HL136||S5||BS-ACC-Mix-Nov19||Zhang Lab||60+7||1,331,982,000 |- | 121120||HL136||S6||AR-CtlAlzctx+-36,39-Nov16||Zhang Lab||60+7||989,739,000 |- | 121120||HL136||S7||RL-totoRNA-3S-Nov16||Zhang Lab||60+7||1,001,072,000 |- | 121120||HL136||S8||VB-UCSD-Lib1,2-Nov15||Zhang Lab||60+7||1,349,662,000 |- | 121108||HL135||S1||RL-ChrX_RNA-KE-Nov6||Zhang Lab||80+7||3,185,510,000 |- | 121108||HL135||S2||RL-ChrX_RNA-KE-Nov6||Zhang Lab||80+7||3,283,159,000 |- | 121108||HL135||S3||RL-ChrX_RNA-KE-Nov6||Zhang Lab||80+7||3,278,597,000 |- | 121108||HL135||S4||RL-ChrX_RNA-KE-Nov6||Zhang Lab||80+7||3,340,275,000 |- | 121108||HL135||S5||AR-Mix-Oct||Zhang Lab||80+7||3,185,703,000 |- | 121108||HL135||S6||AR/JG-Mix-Oct||Zhang Lab||80+7||3,348,992,000 |- | 121108||HL135||S7||AR-Mix-Oct||Zhang Lab||80+7||27,392,000 |- | 121108||HL135||S8||AR-Mix-Oct||Zhang Lab||80+7||3,140,283,000 |- | 121101||HL134||S1||JG,AR-Mix1-Oct||Zhang Lab||36+7||1,155,689,000 |- | 121101||HL134||S2||JG,AR-Mix2-Oct||Zhang Lab||36+7||1,437,112,000 |- | 121101||HL134||S3||JG,AR-Mix3-Oct||Zhang Lab||36+7||466,401,000 |- | 121101||HL134||S4||AL-Exome-NYSCF-Oct31||Zhang Lab||36+7||1,775,177,000 |- | 121101||HL134||S5||AL-Exome-NYSCF-Oct31||Zhang Lab||36+7||1,731,195,000 |- | 121101||HL134||S6||AL-Exome-NYSCF-Oct31||Zhang Lab||36+7||1,773,812,000 |- | 121101||HL134||S7||AL-ChrX-Mix-Aug14||Zhang Lab||36+7||1,525,950,000 |- | 121101||HL134||S8||VB-UCSD-Lib1,2,3-Oct26||Zhang Lab||36+7||1,036,127,000 |- | 121026||HL133||S1||AL-PKU-Mix-Oct26||Zhang Lab||100+7||3,782,267,000 |- | 121026||HL133||S2||AL-PKU-Mix-Oct26||Zhang Lab||100+7||3,887,747,000 |- | 121026||HL133||S3||AL-PKU-Mix-Oct26||Zhang Lab||100+7||3,861,218,000 |- | 121026||HL133||S4||AL-PKU-Mix-Oct26||Zhang Lab||100+7||3,847,635,000 |- | 121026||HL133||S5||AL-PKU-Mix-Oct26||Zhang Lab||100+7||3,874,079,000 |- | 121026||HL133||S6||AL-PKU-Mix-Oct26||Zhang Lab||100+7||3,857,280,000 |- | 121026||HL133||S7||AL-PKU-Mix-Oct26||Zhang Lab||100+7||3,790,502,000 |- | 121026||HL133||S8||AL-PKU-Mix-Oct26||Zhang Lab||100+7||3,682,876,000 |- | 121018||HL132||S1||AR-N/A-29_30-Oct10||Zhang Lab||36+7||855,088,000 |- | 121018||HL132||S2||AR-N/A-31_32-Oct10||Zhang Lab||36+7||1,132,232,000 |- | 121018||HL132||S3||AR-N/A-33_34-Oct10||Zhang Lab||36+7||1,278,326,000 |- | 121018||HL132||S4||AR-N/A-Mix-Oct12||Zhang Lab||36+7||940,280,000 |- | 121018||HL132||S5||AR-N/A-35_36-Oct10||Zhang Lab||36+7||1,347,801,000 |- | 121018||HL132||S6||AR-N/A-37_38-Oct10||Zhang Lab||36+7||1,353,646,000 |- | 121018||HL132||S7||AR-N/A-27_31-Oct1||Zhang Lab||36+7||429,507,000 |- | 121018||HL132||S8||AR-N/A-35_36-Oct1||Zhang Lab||36+7||530,097,000 |- | 121004||HL131||S1||JG Mix||Zhang Lab||36+7||1,649,537,000 |- | 121004||HL131||S2||JG/BS Mix||Zhang Lab||36+7||404,426,000 |- | 121004||HL131||S3||JG Mix||Zhang Lab||36+7||176,438,000 |- | 121004||HL131||S4||JG/BS Mix||Zhang Lab||36+7||847,259,000 |- | 121004||HL131||S5||BS-NA-IVT_NEX-Sep23||Zhang Lab||36+7||944,779,000 |- | 121004||HL131||S6||BS-NA-IVT_NEX-Sep23||Zhang Lab||36+7||952,942,000 |- | 121004||HL131||S7||NP_WGBS_N37_Aug26||Zhang Lab||36+7||1,383,699,000 |- | 121004||HL131||S8||NP_WGBS_N37_Aug26||Zhang Lab||36+7||1,385,360,000 |- | 120917||HL130||S1||JG-Mix1||Zhang Lab||36+7||1,252,740,000 |- | 120917||HL130||S2||JG-Mix1||Zhang Lab||36+7||1,300,355,000 |- | 120917||HL130||S3||JG-Mix2||Zhang Lab||36+7||209,528,000 |- | 120917||HL130||S4||JG-Mix2||Zhang Lab||36+7||226,393,000 |- | 120917||HL130||S5||BS-Mixed-Sep17||Zhang Lab||36+7||913,121,000 |- | 120917||HL130||S6||BS-Mixed-Sep17||Zhang Lab||36+7||910,849,000 |- | 120917||HL130||S7||BS-Mixed-Sep17||Zhang Lab||36+7||891,111,000 |- | 120917||HL130||S8||BB-UCSD-EC_WT_3_TSS-Sep14/BS-Mixed-Sep17||Zhang Lab||36+7||0 |- | 120906||DD004||S1||JG-Mixed-Sep4||Zhang Lab||50+7||57,789,000 |- | 120906||DD004||S2||JG-Mixed-Sep4||Zhang Lab||50+7||72,658,000 |- | 120906||DD004||S3||JG-Mixed-HiSeqRerun||Zhang Lab||50+7||521,368,000 |- | 120906||DD004||S4||JG-Mixed-HL129||Zhang Lab||50+7||981,769,000 |- | 120906||DD004||S5||HL-ASE-Mixed1,3-Aug18||Zhang Lab||50+7||2,903,459,000 |- | 120906||DD004||S6||HL-ASE-Mixed2,3-Aug18||Zhang Lab||50+7||2,839,492,000 |- | 120906||DD004||S7||BS-Mixed-Ind49-62-Aug27||Zhang Lab||50+7||1,003,834,000 |- | 120906||DD004||S8||BS-Mixed-Ind49-62-Aug27||Zhang Lab||50+7||0 |- | 120828||HiSeqAug28||S1||AL-exome-Aug21||Biogem||110+7+110||26,105,524,000 |- | 120828||HiSeqAug28||S2||AL-exome-Aug21||Biogem||110+7+110||26,193,028,000 |- | 120828||HiSeqAug28||S3||AL-exome-Aug21||Biogem||110+7+110||26,142,910,000 |- | 120828||HiSeqAug28||S4||NP-WGBS_N37_Aug26/JG-pool1||Biogem||110+7+110||5,582,640,000 |- | 120828||HiSeqAug28||S5||NP-WGBS_N37-Aug26/JG-pool2||Biogem||110+7+110||1,876,229,000 |- | 120828||HiSeqAug28||S6||NP-WGBS_N37-Aug26||Biogem||110+7+110||25,369,075,000 |- | 120828||HiSeqAug28||S7||NP-BSPP-GL_AL_Ind9_29-Aug23||Biogem||110+7+110||21,754,697,000 |- | 120828||HiSeqAug28||S8||NP-BSPP-GL_AL_Ind9_29-Aug23||Biogem||110+7+110||22,097,555,000 |- | 120818||HL129||S1||HL-ASE-Gimelbrant_Pool_1-Aug18||Zhang Lab||50+7||2,114,017,000 |- | 120818||HL129||S2||HL-ASE-Gimelbrant_Pool_2-Aug18||Zhang Lab||50+7||2,250,067,000 |- | 120818||HL129||S3||HL-ASE-Gimelbrant_Pool_3-Aug18||Zhang Lab||50+7||2,217,115,000 |- | 120818||HL129||S4||HL-ASE-Mixed1,3-Aug18||Zhang Lab||50+7||2,232,737,000 |- | 120818||HL129||S5||HL-ASE-Mixed2,3-Aug18||Zhang Lab||50+7||2,215,046,000 |- | 120818||HL129||S6||JG-Mix||Zhang Lab||50+7||840,966,000 |- | 120818||HL129||S7||VB-UCSD-Lib1,2_Ind6,7-Aug16||Zhang Lab||50+7||1,471,139,000 |- | 120818||HL129||S8||VB-UCSD-Lib3,4_Ind8,5-Aug16||Zhang Lab||50+7||0 |- | 120807||HL128||S1||BB-UCSD-Mix1/Noi||Zhang Lab||50+8+7+8+50||1,564,042,000 |- | 120807||HL128||S2||BB-UCSD-Mix1||Zhang Lab||50+8+7+8+50||1,721,152,000 |- | 120807||HL128||S3||BB-UCSD-Mix1||Zhang Lab||50+8+7+8+50||1,765,020,000 |- | 120807||HL128||S4||BB-UCSD-Mix1||Zhang Lab||50+8+7+8+50||1,740,650,000 |- | 120807||HL128||S5||BB-UCSD-Mix2||Zhang Lab||50+8+7+8+50||125,369,000 |- | 120807||HL128||S6||BB-UCSD-Mix3||Zhang Lab||50+8+7+8+50||1,629,056,000 |- | 120807||HL128||S7||BB-UCSD-Mix4||Zhang Lab||50+8+7+8+50||1,394,441,000 |- | 120807||HL128||S8||BB-UCSD-Mix5||Zhang Lab||50+8+7+8+50||1,080,112,000 |- | 120727||HL127||S1||BB-UCSD-Mix1||Zhang Lab||50+7+50||1,498,099,000 |- | 120727||HL127||S2||BB-UCSD-Mix2||Zhang Lab||50+7+50||1,489,709,000 |- | 120727||HL127||S3||BB-UCSD-Mix3||Zhang Lab||50+7+50||1,493,397,000 |- | 120727||HL127||S4||BB-UCSD-Mix4||Zhang Lab||50+7+50||1,689,174,000 |- | 120727||HL127||S5||AL-Exome-34HHF_Ind1-Jul26||Zhang Lab||50+7+50||1,983,263,000 |- | 120727||HL127||S6||AL-Exome-34HHF_Ind1-Jul26||Zhang Lab||50+7+50||2,018,412,000 |- | 120727||HL127||S7||AL-Exome-34HHF_Ind1-Jul26||Zhang Lab||50+7+50||1,992,166,000 |- | 120727||HL127||S8||JG-Mix||Zhang Lab||50+7+50||1,142,903,000 |- |- | 120716||HL126||S1||HL-Dip-YZ_shCONT_Ind1_6-Jul13||Zhang Lab||36+7||1,229,663,000 |- | 120716||HL126||S2||HL-Dip-YZ_shCONT_Ind1_6-Jul13||Zhang Lab||36+7||1,260,412,000 |- | 120716||HL126||S3||HL-Dip-YZ_shCONT_Ind1_6-Jul13||Zhang Lab||36+7||1,279,465,000 |- | 120716||HL126||S4||HL-Dip-YZ_shCONT_Ind1_6-Jul13||Zhang Lab||36+7||1,257,613,000 |- | 120716||HL126||S5||HL-Dip-YZ_shTDG_Ind7_12-Jul13||Zhang Lab||36+7||1,149,970,000 |- | 120716||HL126||S6||HL-Dip-YZ_shTDG_Ind7_12-Jul13||Zhang Lab||36+7||1,164,412,000 |- | 120716||HL126||S7||HL-Dip-YZ_shTDG_Ind7_12-Jul13||Zhang Lab||36+7||1,161,995,000 |- | 120716||HL126||S8||HL-Dip-YZ_shTDG_Ind7_12-Jul13||Zhang Lab||36+7||1,114,380,000 |- | 120711||HiSeqJul11||S1||RL-iPS-F3p0-July10||Biogem||110+7+110||22,057,958,000 |- | 120711||HiSeqJul11||S2||RL-iPS-F3p0-July10||Biogem||110+7+110||21,862,127,000 |- | 120711||HiSeqJul11||S3||RL-iPS-F3p0-July10||Biogem||110+7+110||22,284,163,000 |- | 120711||HiSeqJul11||S4||RL-iPS-F2p0-July10||Biogem||110+7+110||14,750,894,000 |- | 120711||HiSeqJul11||S5||RL-iPS-F2p0-July10||Biogem||110+7+110||14,720,062,000 |- | 120711||HiSeqJul11||S6||RL-YZ-Tn5mCseq-July10||Biogem||110+7+110||16,762,330,000 |- | 120711||HiSeqJul11||S7||RL-YZ-Tn5mCseq-July10||Biogem||110+7+110||16,687,368,000 |- | 120711||HiSeqJul11||S8||RL-YZ-Tn5mCseq-July10||Biogem||110+7+110||16,708,511,000 |- | 120712||HL125||S1||HC-MDA-UCI_Pool1_N2_49_54-Jun27||Zhang Lab||60+7||1,554,477,000 |- | 120712||HL125||S2||HC-MDA-UCI_Pool2_N2_55_60-Jun27||Zhang Lab||60+7||1,679,482,000 |- | 120712||HL125||S3||HC-No_MDA-UCI_Pool3_NX_49_56,69-Jun27||Zhang Lab||60+7||1,708,966,000 |- | 120712||HL125||S4||HC-No_MDA-UCI_Pool3_NX_49_56,69-Jun27||Zhang Lab||60+7||1,687,443,000 |- | 120712||HL125||S5||BS-CstmTspn-IVT_acces_N2_49_54-Jun29||Zhang Lab||60+7||1,884,012,000 |- | 120712||HL125||S6||HL-ASE-Gimelbrant_Pool_Ind1_13-Jun26||Zhang Lab||60+7||2,199,939,000 |- | 120712||HL125||S7||HL-ASE-Gimelbrant_Pool_Ind1_13-Jun26||Zhang Lab||60+7||2,120,016,000 |- | 120712||HL125||S8||HL-ASE-Gimelbrant_Pool_Ind1_13-Jun26||Zhang Lab||60+7||2,032,687,000 |- | 120702||HL124||S1||RL-BAC-redo6-May17||Zhang Lab||101+7+101||2,554,690,000 |- | 120702||HL124||S2||RL-BAC-redo6-May17||Zhang Lab||101+7+101||2,708,245,000 |- | 120702||HL124||S3||RL-BAC-redo6-May17||Zhang Lab||101+7+101||2,746,275,000 |- | 120702||HL124||S4||RL-BAC-redo6-May17||Zhang Lab||101+7+101||2,725,656,000 |- | 120702||HL124||S5||RL-BAC-redo6-May17||Zhang Lab||101+7+101||2,752,391,000 |- | 120702||HL124||S6||JG-Mix ||Zhang Lab||101+7+101||2,248,182,000 |- | 120702||HL124||S7||JG_RL-Mix||Zhang Lab||101+7+101||2,116,474,000 |- | 120702||HL124||S8||RL-D3.P0_24-May15||Zhang Lab||101+7+101||2,786,376,000 |} ===Jan-Jun=== {| {{table}} | align="center" style="background:#f0f0f0;"|'''Date''' | align="center" style="background:#f0f0f0;"|'''Run''' | align="center" style="background:#f0f0f0;"|'''Lane''' | align="center" style="background:#f0f0f0;"|'''Tube Label''' | align="center" style="background:#f0f0f0;"|'''Seq facility''' | align="center" style="background:#f0f0f0;"|'''Read length''' | align="center" style="background:#f0f0f0;"|'''# filtered reads (bps)''' |- | 120606||HL123||S1||DD-RNAda-BE160_B1_Scere-May29||Zhang Lab||60+7||N/A |- | 120606||HL123||S2||DD-RNAda-BE160_B2_Scere-May29||Zhang Lab||60+7||N/A |- | 120606||HL123||S3||CW-HSM-Meta_NX_49,69-Apr17-Pool3/RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120606||HL123||S4||RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120606||HL123||S5||RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120606||HL123||S6||RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120606||HL123||S7||RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120606||HL123||S8||RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120608||HiseqJun8||S1||RL-PGP1-Bac-pool-Feb8||Biogem||110+7+110||N/A |- | 120608||HiseqJun8||S2||RL-D3.P0_24-May15||Biogem||110+7+110||N/A |- | 120608||HiseqJun8||S3||RL-D3.P0_24-May15||Biogem||110+7+110||N/A |- | 120608||HiseqJun8||S4||RL-N/A-D/F_p5-Jun6||Biogem||110+7+110||N/A |- | 120608||HiseqJun8||S5||RL-N/A-D/F_p5-Jun6||Biogem||110+7+110||N/A |- | 120608||HiseqJun8||S6||RL-N/A-D/F_p5-Jun6||Biogem||110+7+110||N/A |- | 120608||HiseqJun8||S7||RL-N/A-D/F_p5-Jun6||Biogem||110+7+110||N/A |- | 120608||HiseqJun8||S8|| NP-BSPP-SR_HV_Ind61.62.65_80-May31||Biogem||110+7+110||N/A |- | 120605||HL122||S1||DD-RNAda-BE160_B1_Scere-May29||Zhang Lab||60+7||N/A |- | 120605||HL122||S2||DD-RNAda-BE160_B2_Scere-May29||Zhang Lab||60+7||N/A |- | 120605||HL122||S3||CW-HSM-Meta_NX_49,69-Apr17-Pool3/RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120605||HL122||S4||RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120605||HL122||S5||RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120605||HL122||S6||RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120605||HL122||S7||RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120605||HL122||S8||RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120601||HL121||S1||DD-RNAda-BE160_B1_Scere-May29||Zhang Lab||60+7||N/A |- | 120601||HL121||S2||DD-RNAda-BE160_B2_Scere-May29||Zhang Lab||60+7||N/A |- | 120601||HL121||S3||CW-HSM-Meta_NX_49,69-Apr17-Pool3/RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120601||HL121||S4||RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120601||HL121||S5||RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120601||HL121||S6||RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120601||HL121||S7||RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120601||HL121||S8||RL-PGP1-Bac-pool-Feb8||Zhang Lab||60+7||N/A |- | 120613||HL120||S1||BB-UCSD-KAZ_Metagenomic_Nx3-May29||Zhang Lab||36+7+36||N/A |- | 120613||HL120||S2||BB-UCSD-OT59_Nx12-May29||Zhang Lab||36+7+36||N/A |- | 120613||HL120||S3||Mix3-See Below||Zhang Lab||36+7+36||N/A |- | 120613||HL120||S4||Mix4-See Below||Zhang Lab||36+7+36||N/A |- | 120613||HL120||S5||Mix5-See Below||Zhang Lab||36+7+36||N/A |- | 120613||HL120||S6||Mix6-See Below||Zhang Lab||36+7+36||N/A |- | 120613||HL120||S7||Mix7-See Below||Zhang Lab||36+7+36||N/A |- | 120613||HL120||S8||Mix8-See Below||Zhang Lab||36+7+36||N/A |- | 120529||HiseqMay29||S1||AL-Exome-Xu+P1FiPS+Hues9-May24||Biogem||110+7+110||N/A |- | 120529||HiseqMay29||S2||AL-Exome-Xu+P1FiPS+Hues9-May24||Biogem||110+7+110||N/A |- | 120529||HiseqMay29||S3||AL-Mexome-XuSCNT-May24||Biogem||110+7+110||N/A |- | 120529||HiseqMay29||S4||NP-BSPP-SR_Ind1_60-May21||Biogem||110+7+110||N/A |- | 120529||HiseqMay29||S5||NP-BSPP-SR_Ind1_60-May21||Biogem||110+7+110||N/A |- | 120529||HiseqMay29||S6||NP-BSPP-SR_Ind1_60-May21||Biogem||110+7+110||N/A |- | 120529||HiseqMay29||S7||NP-BSPP-SR_Ind1_60-May21||Biogem||110+7+110||N/A |- | 120529||HiseqMay29||S8||NP-BSPP-SR_Ind1_60-May21||Biogem||110+7+110||N/A |- | 120518||HL119||S1||DD-RNAdq-S.cere_BE160-May16||Zhang Lab||80+7||1,308,233,000 |- | 120518||HL119||S2||DD-RNAdq-S.cere_BE160-May16||Zhang Lab||80+7||1,711,209,000 |- | 120518||HL119||S3||HC-UCI_Syn-MDA_N2_49_60-May15-Pool1||Zhang Lab||80+7||1,552,229,000 |- | 120518||HL119||S4||HC-UCI_Syn-No_MDA_Nx49_53,55_59-May15-Pool2||Zhang Lab||80+7||1,192,129,000 |- | 120518||HL119||S5||RL-KH4-Tn5mC-May15||Zhang Lab||80+7||1,421,365,000 |- | 120518||HL119||S6||RL-KH4-Tn5mC-May15||Zhang Lab||80+7||1,418,299,000 |- | 120518||HL119||S7||RL-KH4-Tn5mC-May15||Zhang Lab||80+7||1,403,280,000 |- | 120518||HL119||S8||RL-KH4-Tn5mC-May15||Zhang Lab||80+7||1,268,708,000 |- | N/A||HiseqMay3||S1||RL-N/A-B_P30_24-Apr24||Biogem||101+7+101||N/A |- | N/A||HiseqMay3||S2||RL-N/A-dFB_Colony_D_P15-May2||Biogem||101+7+101||N/A |- | N/A||HiseqMay3||S3||RL-N/A-dFB_Colony_D_P15-May2||Biogem||101+7+101||N/A |- | N/A||HiseqMay3||S4||RL-N/A-dFB_Colony_D_P15-May2||Biogem||101+7+101||N/A |- | N/A||HiseqMay3||S5||RL-N/A-dFB_Colony_F_P15-May2||Biogem||101+7+101||N/A |- | N/A||HiseqMay3||S6||RL-N/A-dFB_Colony_F_P15-May2||Biogem||101+7+101||N/A |- | N/A||HiseqMay3||S7||RL-N/A-dFB_Colony_F_P15-May2||Biogem||101+7+101||N/A |- | N/A||HiseqMay3||S8||HC-MsMetaGen_SetA_13_16-Dec15||Biogem||101+7+101||N/A |- | 120426||HL118||S1||PhiX Control||Zhang Lab||101+7+101||N/A |- | 120426||HL118||S2||RL-N/A-Wei1-Apr10||Zhang Lab||101+7+101||N/A |- | 120426||HL118||S3||HC/JG-N2Mix||Zhang Lab||101+7+101||N/A |- | 120426||HL118||S4||HC/JG-NxMix||Zhang Lab||101+7+101||N/A |- | 120426||HL118||S5||NP-BSPP-LC_PGP1FiRC1-Apr24||Zhang Lab||101+7+101||N/A |- | 120426||HL118||S6||DD-RNAdq-S.cere/HuBrain-Apr24||Zhang Lab||101+7+101||N/A |- | 120426||HL118||S7||BB-Kaz2_Nx11-Apr23||Zhang Lab||101+7+101||N/A |- | 120426||HL118||S8||BB-Mix-Apr23||Zhang Lab||101+7+101||N/A |- | N/A||HiseqApr26||S1||RL-N/A-Fib_24-Apr24||Biogem||101+7+101||N/A |- | N/A||HiseqApr26||S2||RL-N/A-B2_Remix_23-Apr24||Biogem||101+7+101||N/A |- | N/A||HiseqApr26||S3||RL-N/A-B2_Remix_23-Apr24||Biogem||101+7+101||N/A |- | N/A||HiseqApr26||S4||RL-23-N/A-B3_Remix_23-Apr24||Biogem||101+7+101||N/A |- | N/A||HiseqApr26||S5||RL-23-N/A-B3_Remix_23-Apr24||Biogem||101+7+101||N/A |- | N/A||HiseqApr26||S6||RL-N/A-Wei1-Apr10||Biogem||101+7+101||N/A |- | N/A||HiseqApr26||S7||RL-N/A-B_P30_24-Apr24||Biogem||101+7+101||N/A |- | N/A||HiseqApr26||S8||RL-N/A-B_P30_24-Apr24||Biogem||101+7+101||N/A |- | 120412||HL117||S1||BB-UCSD-Clos_Fruc_RNA_IND8-Feb7/BB-UCSD-Clos_Fruc_NO3_RNA_IND9-Feb7||Zhang Lab||||N/A |- | 120412||HL117||S2||BB-UCSD-Clos_H2_RNA_IND10-Feb7/BB-UCSD-Clos_H2_NO3_RNA_IND11-Feb7||Zhang Lab||||N/A |- | 120412||HL117||S3||BB-UCSD-Clos_XS_RNA_NX12-Feb7/BB-UCSD-G_met_agg_Reseq_Nx11-Feb7/BB-UCSD-Rel_1_Reseq_Nx5-Feb7||Zhang Lab||||N/A |- | 120412||HL117||S4||BB-UCSD-Clavu11_Reseq_Nx4-Feb7/BB-UCSD-Clavu10_Reseq_Nx3-Feb7||Zhang Lab||||N/A |- | 120412||HL117||S5||BB-UCSD-3+_geo_rpos_Chipseq_IND5-Feb7/BB-UCSD-3-_geo_rposChipseq_IND6-Feb7/BB-UCSD-mRNA_NL2_C4_RNA_IND2-Feb7||Zhang Lab||||N/A |- | 120412||HL117||S6||BB-UCSD-Clavu4_Reseq_Nx2-Feb7/BB-UCSD-NL2C4_Reseq_Nx1-Feb7||Zhang Lab||||N/A |- | 120412||HL117||S7||Jeff/Sam Library Mix||Zhang Lab||||N/A |- | 120412||HL117||S8||PhiX||Zhang Lab||||N/A |- | 120313||HL116||S1||NP-BSPP-PGP1FiPS_Mar7||Zhang Lab||||N/A |- | 120313||HL116||S2||NP-BSPP-PGP1FiPS_Mar7||Zhang Lab||||N/A |- | 120313||HL116||S3||NP-BSPP-PGP1FiPS_Mar7||Zhang Lab||||N/A |- | 120313||HL116||S4||JG_Mix||Zhang Lab||||N/A |- | 120313||HL116||S5||HC_Mix||Zhang Lab||||N/A |- | 120313||HL116||S6||HC_Mix||Zhang Lab||||N/A |- | 120313||HL116||S7||BB-UCSD-O4M8-Mar12||Zhang Lab||||N/A |- | 120313||HL116||S8||BB-UCSD-OTS7-Mar12||Zhang Lab||||N/A |- | 120313||HiseqMar13||S1||RL-B2_23-Mar8||Biogem||100+7+100||18,638,800,000 |- | 120313||HiseqMar13||S2||RL-B2_23-Mar8||Biogem||100+7+100||18,952,527,000 |- | 120313||HiseqMar13||S3||AL-Exome-HFF+ips_XuLab-Mar7/AL-Mexome-MouseNT_XuLab-Mar7||Biogem||100+7+100||22,825,163,000 |- | 120313||HiseqMar13||S4||AL-Exome-HFF+ips_XuLab-Mar7/AL-Mexome-MouseNT_XuLab-Mar7||Biogem||100+7+100||23,022,878,000 |- | 120313||HiseqMar13||S5||RL-B3_24-Mar8||Biogem||100+7+100||14,806,116,000 |- | 120313||HiseqMar13||S6||RL-B3_24-Mar8||Biogem||100+7+100||14,270,689,000 |- | 120313||HiseqMar13||S7||RL-Fib_13-Mar8||Biogem||100+7+100||21,330,858,000 |- | 120313||HiseqMar13||S8||RL-Fib_13-Mar8||Biogem||100+7+100||21,625,442,000 |- | 120217||HL115||S1||BB-UCSD-Clos_Fruc_RNA_IND8-Feb7/BB-UCSD-Clos_Fruc_NO3_RNA_IND9-Feb7||Zhang Lab||100+7+100||N/A |- | 120217||HL115||S2||BB-UCSD-Clos_H2_RNA_IND10-Feb7/BB-UCSD-Clos_H2_NO3_RNA_IND11-Feb7||Zhang Lab||100+7+100||N/A |- | 120217||HL115||S3||BB-UCSD-Clos_XS_RNA_NX12-Feb7/BB-UCSD-G_met_agg_Reseq_Nx11-Feb7/BB-UCSD-Rel_1_Reseq_Nx5-Feb7||Zhang Lab||100+7+100||N/A |- | 120217||HL115||S4||BB-UCSD-Clavu11_Reseq_Nx4-Feb7/BB-UCSD-Clavu10_Reseq_Nx3-Feb7||Zhang Lab||100+7+100||N/A |- | 120217||HL115||S5||BB-UCSD-3+_geo_rpos_Chipseq_IND5-Feb7/BB-UCSD-3-_geo_rposChipseq_IND6-Feb7/BB-UCSD-mRNA_NL2_C4_RNA_IND2-Feb7||Zhang Lab||100+7+100||N/A |- | 120217||HL115||S6||BB-UCSD-Clavu4_Reseq_Nx2-Feb7/BB-UCSD-NL2C4_Reseq_Nx1-Feb7||Zhang Lab||100+7+100||N/A |- | 120217||HL115||S7||Jeff's Library Mix||Zhang Lab||100+7+100||N/A |- | 120217||HL115||S8||PhiX||Zhang Lab||100+7+100||N/A |- | 120210||HL114||S1||AL-Exome-mouseB6-Oct7||Zhang Lab||100+7||2,732,843 |- | 120210||HL114||S2||RL-Fib100c_29s_ExoCap-Jan31||Zhang Lab||100+7||3,340,343 |- | 120210||HL114||S3||RL-Fib100c_29s_ExoCap-Jan31||Zhang Lab||100+7||3,348,938 |- | 120210||HL114||S4||AL-Exome-mouseB6-Oct7||Zhang Lab||100+7||3,011,255 |- | 120210||HL114||S5||HC-UCI-no_MDA-NX63_67-Jan19/HC-UCI-no_MDA-NX68-Jan19/JG_e_coli_jan24/JG_e_coli_jan27/HC-NX_SAGs-NX49-54-Jan26||Zhang Lab||100+7||1,946,563 |- | 120210||HL114||S6||HC-NX_SAGs-NX55-60-Jan26/HC-NX_SAGs-NX61-66-Jan26/HC-NX_SAGs-NX66-72-Jan26||Zhang Lab||100+7||3,198,473 |- | 120210||HL114||S7||RL-EF_ExoCap-Jan31||Zhang Lab||100+7||3,177,037 |- | 120210||HL114||S8||Stanford-LiLab_sample-Feb08||Zhang Lab||100+7||3,517,336 |- | 120209||HighSeqFeb09||S1||RL-PGP1-Bac-pool-Feb8||Biogem||101+7+101||N/A |- | 120209||HighSeqFeb09||S2||RL-PGP1-Bac-pool-Feb8||Biogem||101+7+101||N/A |- | 120209||HighSeqFeb09||S3||RL-PGP1-Bac-pool-Feb8||Biogem||101+7+101||N/A |- | 120209||HighSeqFeb09||S4||AL-Exome-NYSCF_N29-20-Jan10||Biogem||101+7+101||N/A |- | 120209||HighSeqFeb09||S5||AL-Mexome-XuLab-Jan10/AL-Exome-NYSCF_N29-20-Jan10||Biogem||101+7+101||N/A |- | 120209||HighSeqFeb09||S6||HL-WGBS-GM12878-N2_9-Feb7-A||Biogem||101+7+101||N/A |- | 120209||HighSeqFeb09||S7||HL-WGBS-GM12878-N2_9-Feb7-C1||Biogem||101+7+101||N/A |- | 120209||HighSeqFeb09||S8||HL-WGBS-GM12878-N2_9-Feb7-C1||Biogem||101+7+101||N/A |- | 120123||HL113||S1||AL-Exome-mouseB6-Oct7||Zhang Lab||110+7||3,065,619 |- | 120123||HL113||S2||AL-Exome-mouseB6-Oct7||Zhang Lab||110+7||3,327,956 |- | 120123||HL113||S3||AL-Exome-mouseB6-Oct7||Zhang Lab||110+7||3,270,428 |- | 120123||HL113||S4||AL-Exome-mouseB6-Oct7||Zhang Lab||110+7||3,273,502 |- | 120123||HL113||S5||RL-BAC-73_96-Dec22||Zhang Lab||110+7||2,943,709 |- | 120123||HL113||S6||Sam +Jeff||Zhang Lab||110+7||2,369,087 |- | 120123||HL113||S7|| Baylor-RC_1_Seqlib-Dec13||Zhang Lab||110+7||1,646,842 |- | 120123||HL113||S8||NP-BSPP-LC_54C-Oct6||Zhang Lab||110+7||1,416,517 |} ==2011== ===Jul-Dec=== {| {{table}} | align="center" style="background:#f0f0f0;"|'''Date''' | align="center" style="background:#f0f0f0;"|'''Run''' | align="center" style="background:#f0f0f0;"|'''Lane''' | align="center" style="background:#f0f0f0;"|'''Tube Label''' | align="center" style="background:#f0f0f0;"|'''Seq facility''' | align="center" style="background:#f0f0f0;"|'''Read length''' | align="center" style="background:#f0f0f0;"|'''# filtered reads (bps)''' |- | 111222||HL112||S1||AL-Exome-mouseB6-Oct7||Zhang Lab||110+7||Run Failed |- | 111222||HL112||S2||AL-Exome-mouseB6-Oct7||Zhang Lab||110+7||Run Failed |- | 111222||HL112||S3||AL-Exome-mouseB6-Oct7||Zhang Lab||110+7||Run Failed |- | 111222||HL112||S4||AL-Exome-mouseB6-Oct7||Zhang Lab||110+7||Run Failed |- | 111222||HL112||S5||RL-BAC-73_96-Dec22||Zhang Lab||110+7||Run Failed |- | 111222||HL112||S6||Stanford-JL-Dec1||Zhang Lab||110+7||Run Failed |- | 111222||HL112||S7||Baylor-RC_1_Seqlib-Dec13||Zhang Lab||110+7||Run Failed |- | 111222||HL112||S8||NP-BSPP-LC_54C-Oct6||Zhang Lab||110+7||Run Failed |- | 111207||HighSeqDec07||S1||YZ-Chipseq-1_24-Dec5-HL||Biogem||N/A||N/A |- | 111207||HighSeqDec07||S2||YZ-Chipseq-1_24-Dec5-HL||Biogem||N/A||N/A |- | 111207||HighSeqDec07||S3||YZ-Chipseq-1_24-Dec5-HL||Biogem||N/A||N/A |- | 111207||HighSeqDec07||S4||UCLA-Blood_Schizo_SeqLib2-Oct3||Biogem||N/A||N/A |- | 111207||HighSeqDec07||S5||NP-BSPP-Hapmap-Nov15||Biogem||N/A||N/A |- | 111207||HighSeqDec07||S6||NP-BSPP-Hapmap-Nov15||Biogem||N/A||N/A |- | 111207||HighSeqDec07||S7||NP-BSPP-Hapmap-Nov15||Biogem||N/A||N/A |- | 111207||HighSeqDec07||S8||PhiX||Biogem||N/A||N/A |- | N/A||HL110||S1||NP-BSPP-Hapmap-Nov15||Zhang Lab||N/A||N/A |- | N/A||HL110||S2||AL-Exome-mouseB6-Oct7||Zhang Lab||N/A||N/A |- | N/A||HL110||S3||AL-Exome-mouseB6-Oct7 (90%)/HC-Marine-no_MDA-NX67&68-Nov4(10%)||Zhang Lab||N/A||N/A |- | N/A||HL110||S4||AL-Exome-mouseB6 (90%) /HC-Marine_16S_N2_69&71 (10%)||Zhang Lab||N/A||N/A |- | N/A||HL110||S5||NP-BSPP-Hapmap-Nov15||Zhang Lab||N/A||N/A |- | N/A||HL110||S6||YZ_UNC-5caC-DIP-Oct27||Zhang Lab||N/A||N/A |- | N/A||HL110||S7||YZ_UNC-5fC-DIP-Oct27||Zhang Lab||N/A||N/A |- | N/A||HL110||S8||YZ_UNC-5fC-DIP-Oct27||Zhang Lab||N/A||N/A |- | 111112||HL109||S1||RL-RNA-88_96-Oct28||Zhang Lab||N/A||N/A |- | 111112||HL109||S2||RL-RNA-88_96-Oct28||Zhang Lab||N/A||N/A |- | 111112||HL109||S3||RL-RNA-88_96-Oct28||Zhang Lab||N/A||N/A |- | 111112||HL109||S4||UCLA-Blood_Schizo_SeqLib2-Oct3||Zhang Lab||N/A||N/A |- | 111112||HL109||S5||UCLA-Blood_Schizo_SeqLib2-Oct3||Zhang Lab||N/A||N/A |- | 111112||HL109||S6||UCLA-Blood_Schizo_SeqLib2-Oct3||Zhang Lab||N/A||N/A |- | 111112||HL109||S7||UCLA-Blood_Schizo_SeqLib2-Oct3||Zhang Lab||N/A||N/A |- | 111112||HL109||S8||UCLA-Blood_Schizo_SeqLib2-Oct3||Zhang Lab||N/A||N/A |- | 111109||HL108||S1||YZ_UNC-5caC-DIP-Oct27||Zhang Lab||40+7||N/A |- | 111109||HL108||S2||YZ_UNC-5caC-DIP-Oct27||Zhang Lab||40+7||N/A |- | 111109||HL108||S3||YZ_UNC-INPUT-Oct27||Zhang Lab||40+7||N/A |- | 111109||HL108||S4||YZ_UNC-IgG-DIP-Oct27||Zhang Lab||40+7||N/A |- | 111109||HL108||S5||YZ_UNC-5fC-DIP-Oct27||Zhang Lab||40+7||N/A |- | 111109||HL108||S6||RL-RNA-88_96-Oct28||Zhang Lab||40+7||N/A |- | 111109||HL108||S7||RL-Hap-73_80-Nov8||Zhang Lab||40+7||N/A |- | 111109||HL108||S8||RL-Hap-73_80-Nov8||Zhang Lab||40+7||N/A |- | 111030||HL107||S1||RL-RNA-88_96-Oct28||Zhang Lab||100+7+100||N/A |- | 111030||HL107||S2||RL-RNA-88_96-Oct28||Zhang Lab||100+7+100||N/A |- | 111030||HL107||S3||RL-RNA-88_96-Oct28||Zhang Lab||100+7+100||N/A |- | 111030||HL107||S4||UCLA-Blood_Schizo_SeqLib2-Oct3||Zhang Lab||100+7+100||N/A |- | 111030||HL107||S5||UCLA-Blood_Schizo_SeqLib2-Oct3||Zhang Lab||100+7+100||N/A |- | 111030||HL107||S6||UCLA-Blood_Schizo_SeqLib2-Oct3||Zhang Lab||100+7+100||N/A |- | 111030||HL107||S7||UCLA-Blood_Schizo_SeqLib2-Oct3||Zhang Lab||100+7+100||N/A |- | 111030||HL107||S8||UCLA-Blood_Schizo_SeqLib2-Oct3||Zhang Lab||100+7+100||N/A |- | 111019||HL106||S1||NP-BSPP-Norm_Conc-Sep18||Zhang Lab||110+7+110||N/A |- | 111019||HL106||S2||NP-BSPP-Norm_Conc-Sep18||Zhang Lab||110+7+110||N/A |- | 111019||HL106||S3||NP-BSPP-Norm_Conc-Sep18||Zhang Lab||110+7+110||N/A |- | 111019||HL106||S4||HC-Ecoli-MDA_Nx1_8-Oct9/RL-RNA-88_96-Oct18||Zhang Lab||110+7+110||N/A |- | 111019||HL106||S5||NP-BSPP-Norm_Conc-Sep18||Zhang Lab||110+7+110||N/A |- | 111019||HL106||S6||NP-BSPP-Norm_Conc-Sep18||Zhang Lab||110+7+110||N/A |- | 111019||HL106||S7||NP-BSPP-Norm_Conc-Sep18||Zhang Lab||110+7+110||N/A |- | 111019||HL106||S8||NP-BSPP-Norm_Conc-Sep18||Zhang Lab||110+7+110||N/A |- | 111013||HL105||S1||AL-Exome-HFF+iPS-Oct7||Zhang Lab||100+7||3,770,309,000 |- | 111013||HL105||S2||AL-Exome-HFF+iPS-Oct7||Zhang Lab||100+7||3,810,129,000 |- | 111013||HL105||S3||AL-Exome-HFF+iPS-Oct7||Zhang Lab||100+7||3,848,633,000 |- | 111013||HL105||S4||AL-Exome-HFF+iPS-Oct7||Zhang Lab||100+7||3,793,174,000 |- | 111013||HL105||S5||AL-Exome-HFF+iPS-Oct7||Zhang Lab||100+7||3,665,699,000 |- | 111013||HL105||S6||AL-Exome-HFF+iPS-Oct7/JG-Microbiome-9>12-Oct11_1X||Zhang Lab||100+7||3,684,441,000 |- | 111013||HL105||S7||NP-BSPP-LC_54C-Oct6||Zhang Lab||100+7||2,845,333,000 |- | 111013||HL105||S8||NP-BSPP-LC_52C-Oct6||Zhang Lab||100+7||2,694,544,000 |- | 111004||HL104||S1||RL-RNA-Indx7_15-Sep2||Frazer Lab||100+7+100||23,010,743,000 |- | 111004||HL104||S2||RL-RNA-Indx7_15-Sep2||Frazer Lab||100+7+100||22,709,742,000 |- | 111004||HL104||S3||RL-RNA-Indx7_15-Sep2||Frazer Lab||100+7+100||21,423,147,000 |- | 111004||HL104||S4||NP-BSPP-Ind1_45-Sep18||Frazer Lab||100+7+100||21,524,694,000 |- | 111004||HL104||S5||NP-BSPP-Ind1_45-Sep18||Frazer Lab||100+7+100||22,260,363,000 |- | 111004||HL104||S6||NP-BSPP-Ind1_45-Sep18||Frazer Lab||100+7+100||21,767,215,000 |- | 111004||HL104||S7||NP-BSPP-Ind1_45-Sep18||Frazer Lab||100+7+100||22,601,042,000 |- | 111004||HL104||S8||UCLA-Blood_Schizo_SeqLib2-Oct3||Frazer Lab||100+7+100||22,537,567,000 |- | 110923||HL103||S1||Mix_1||Zhang Lab||80+7||2,353,084,000 |- | 110923||HL103||S2||Mix_2||Zhang Lab||80+7||2,798,058,000 |- | 110923||HL103||S3||Mix_3||Zhang Lab||80+7||2,587,534,000 |- | 110923||HL103||S4||Mix_4||Zhang Lab||80+7||1,886,856,000 |- | 110923||HL103||S5||Mix_5||Zhang Lab||80+7||0 |- | 110923||HL103||S6||AL-Exome-Hues9-Sep20||Zhang Lab||80+7||1,341,156,000 |- | 110923||HL103||S7||AL-Exome-Hues9-Sep20||Zhang Lab||80+7||1,168,985,000 |- | 110923||HL103||S8||AL-Exome-Hues9-Sep20||Zhang Lab||80+7||2,408,391,000 |- | 110907||HL102||S1||LS-5FC_Dipseq-Input_Ctrl-Sep2||Zhang Lab||36||1,200,789,000 |- | 110907||HL102||S2||LS-5FC_Dipseq-Input_Ctrl-Sep2||Zhang Lab||36||1,224,362,000 |- | 110907||HL102||S3||LS-5FC_Dipseq-Input_KD-Sep2||Zhang Lab||36||1,271,789,000 |- | 110907||HL102||S4||LS-5FC_Dipseq-Input_KD-Sep2||Zhang Lab||36||1,075,646,000 |- | 110907||HL102||S5||LS-5FC_Dipseq-IP_Ctrl-Sep2||Zhang Lab||36||1,022,725,000 |- | 110907||HL102||S6||LS-5FC_Dipseq-IP_Ctrl-Sep2||Zhang Lab||36||1,231,843,000 |- | 110907||HL102||S7||LS-5FC_Dipseq-IP_KD-Sep2||Zhang Lab||36||1,242,139,000 |- | 110907||HL102||S8||LS-5FC_Dipseq-IP_KD-Sep2||Zhang Lab||36||1,179,527,000 |- | 110902||HL101||S1||RL-hap-1_12-Sep2||Zhang Lab||60+7||1,719,847,000 |- | 110902||HL101||S2||RL-hap-1_12-Sep2||Zhang Lab||60+7||1,812,994,000 |- | 110902||HL101||S3||RL-hap-13_23-Sep2||Zhang Lab||60+7||1,849,651,000 |- | 110902||HL101||S4||RL-hap-13_23-Sep2||Zhang Lab||60+7||1,572,285,000 |- | 110902||HL101||S5||MC-hap-1_11-Sep2||Zhang Lab||60+7||1,660,109,000 |- | 110902||HL101||S6||MC-hap-1_11-Sep2||Zhang Lab||60+7||1,726,858,000 |- | 110902||HL101||S7||RL-RNA-Indx7_15-Sep2||Zhang Lab||60+7||1,977,301,000 |- | 110902||HL101||S8||RL-RNA-Indx7_15-Sep2||Zhang Lab||60+7||1,840,050,000 |- | 110811||HL100||S1||NP-3SMUips-Ind21_23-Aug4||Zhang Lab||80+7||1,204,850,000 |- | 110811||HL100||S2||NP-3SMUips-Ind21_23-Aug4||Zhang Lab||80+7||1,328,767,000 |- | 110811||HL100||S3||NP-3SMUips-Ind21_23-Aug4||Zhang Lab||80+7||1,343,603,000 |- | 110811||HL100||S4||Al-Exome-D+E+F-Jun10||Zhang Lab||80+7||1,119,655,000 |- | 110811||HL100||S5||JG-Microbiome-Ecoli3_Ind11-Aug10||Zhang Lab||80+7||905,846,000 |- | 110811||HL100||S6||JG-Microbiome-Ecoli4_Ind12-Aug10||Zhang Lab||80+7||388,600,000 |- | 110811||HL100||S7||AG-WGBS-Imprint150-Aug11||Zhang Lab||80+7||1,204,722,000 |- | 110811||HL100||S8||HC-SAG-Ecoli_M_N_IND1_4-Aug11||Zhang Lab||80+7||1,101,521,000 |- | 110726||HL099||S1||RL-RNAseq-1_6-Jul12||Zhang Lab||80+6||1,873,470,000 |- | 110726||HL099||S2||RL-RNAseq-1_6-Jul12||Zhang Lab||80+6||1,951,951,000 |- | 110726||HL099||S3||RL-RNAseq-Ind1_4Mix-Jul25||Zhang Lab||80+6||1,856,962,000 |- | 110726||HL099||S4||RL-RNAseq-Ind1_4Mix-Jul25||Zhang Lab||80+6||1,840,794,000 |- | 110726||HL099||S5||RL-RNAseq-Ind1_4Mix-Jul25||Zhang Lab||80+6||1,716,761,000 |- | 110726||HL099||S6||RL-RNAseq-Ind1_4Mix-Jul25||Zhang Lab||80+6||1,832,192,000 |- | 110726||HL099||S7||UCSD-MH-EColi1_2-Jul26||Zhang Lab||80+6||1,594,973,000 |- | 110726||HL099||S8||UCSD-MH-EColi3_4-Jul26||Zhang Lab||80+6||1,841,498,000 |- | 110714||HL098||S1||Al-Exome-D+E+F-Jun10/RL-RNAseq-1_6-Jul12||Zhang Lab||80+7+80||1,961,699,000 |- | 110714||HL098||S2||AL-Exome-CVI+CVB-Jun29||Zhang Lab||80+7+80||3,306,998,000 |- | 110714||HL098||S3||AL-Exome-CVI+CVB-Jun29||Zhang Lab||80+7+80||3,280,518,000 |- | 110714||HL098||S4||AL-Exome-CVI+CVB-Jun29||Zhang Lab||80+7+80||3,290,176,000 |- | 110714||HL098||S5||AL-Exome-CVI+CVB-Jun29||Zhang Lab||80+7+80||3,252,141,000 |- | 110714||HL098||S6||AL-Exome-CVI+CVB-Jun29||Zhang Lab||80+7+80||3,252,868,000 |- | 110714||HL098||S7||AL-Exome-CVI+CVB-Jun29||Zhang Lab||80+7+80||3,259,014,000 |- | 110714||HL098||S8||AL-Exome-CVI+CVB-Jun29||Zhang Lab||80+7+80||3,147,221,000 |} ===Jan-Jun=== {| {{table}} | align="center" style="background:#f0f0f0;"|'''Date''' | align="center" style="background:#f0f0f0;"|'''Run''' | align="center" style="background:#f0f0f0;"|'''Lane''' | align="center" style="background:#f0f0f0;"|'''Tube Label''' | align="center" style="background:#f0f0f0;"|'''Seq facility''' | align="center" style="background:#f0f0f0;"|'''Read length''' | align="center" style="background:#f0f0f0;"|'''# filtered reads (bps)''' |- | 110626||HL097||S1||AL-Exome-12plex-Jun19||Zhang Lab||80+7||2,990,440,000 |- | 110626||HL097||S2||AL-Exome-12plex-Jun19||Zhang Lab||80+7||3,109,455,000 |- | 110626||HL097||S3||AL-Exome-12plex-Jun19||Zhang Lab||80+7||3,069,859,000 |- | 110626||HL097||S4||AL-Exome-12plex-Jun19||Zhang Lab||80+7||3,054,658,000 |- | 110626||HL097||S5||AL-Exome-12plex-Jun19||Zhang Lab||80+7||3,055,581,000 |- | 110626||HL097||S6||AL-Exome-12plex-Jun19||Zhang Lab||80+7||3,022,079,000 |- | 110626||HL097||S7||AL-Exome-12plex-Jun19||Zhang Lab||80+7||2,973,142,000 |- | 110626||HL097||S8||AL-Exome-12plex-Jun19||Zhang Lab||80+7||2,858,595,000 |- | 110619||HL096||S1||AL-Exome-12plex-Jun19||Zhang Lab||80+7+80||3,096,873,000 |- | 110619||HL096||S2||AL-Exome-12plex-Jun19||Zhang Lab||80+7+80||3,142,447,000 |- | 110619||HL096||S3||AL-Exome-12plex-Jun19||Zhang Lab||80+7+80||3,152,777,000 |- | 110619||HL096||S4||AL-Exome-12plex-Jun19||Zhang Lab||80+7+80||3,146,637,000 |- | 110619||HL096||S5||AL-Exome-12plex-Jun19||Zhang Lab||80+7+80||3,130,481,000 |- | 110619||HL096||S6||AL-Exome-12plex-Jun19||Zhang Lab||80+7+80||3,113,755,000 |- | 110619||HL096||S7||AL-Exome-12plex-Jun19||Zhang Lab||80+7+80||3,140,271,000 |- | 110619||HL096||S8||AL-Exome-12plex-Jun19||Zhang Lab||80+7+80||3,063,317,000 |- | 110608||HL095||S1||AL-Exome-e7_B#2-Jun1||Zhang Lab||80+7||2,948,051,000 |- | 110608||HL095||S2||AL-Exome-e7_B#2-Jun1||Zhang Lab||80+7||3,072,660,000 |- | 110608||HL095||S3||UCSD-MH-EColi1_4-May4||Zhang Lab||80+7||2,863,441,000 |- | 110608||HL095||S4||RL-Hap_RNAseq-1_13-Jun6||Zhang Lab||80+7||1,552,728,000 |- | 110608||HL095||S5||AL-Exome-e7_A#4-Jun1||Zhang Lab||80+7||3,083,656,000 |- | 110608||HL095||S6||AL-Exome-e7_A#4-Jun1||Zhang Lab||80+7||3,123,515,000 |- | 110608||HL095||S7||AL-Exome-e7_5#9-Jun1||Zhang Lab||80+7||3,016,211,000 |- | 110608||HL095||S8||AL-Exome-e7_5#9-Jun1||Zhang Lab||80+7||2,951,944,000 |- | 110514||HL094||S1||NP-Lib_free_Ind1_24-May3||Zhang Lab||110+7+110||4,581,981,000 |- | 110514||HL094||S2||NP-Lib_free_Ind1_24-May3||Zhang Lab||110+7+110||4,742,654,000 |- | 110514||HL094||S3||NP-Lib_free_Ind1_24-May3||Zhang Lab||110+7+110||4,721,226,000 |- | 110514||HL094||S4||NP-Lib_free_Ind1_24-May3 + HC-MDA-Mouse_2h_C5-Mar2||Zhang Lab||110+7+110||4,538,689,000 |- | 110514||HL094||S5||NP-Lib_free_Ind1_24-May3||Zhang Lab||110+7+110||4,818,462,000 |- | 110514||HL094||S6||NP-Lib_free_Ind1_24-May3||Zhang Lab||110+7+110||4,789,628,000 |- | 110514||HL094||S7||NP-Lib_free_Ind1_24-May3||Zhang Lab||110+7+110||4,730,124,000 |- | 110514||HL094||S8||NP-Lib_free_Ind1_24-May3||Zhang Lab||110+7+110||4,668,899,000 |- | 110417||HL093||S1||AL-SCG-4_Plex-Feb14||Zhang Lab||80+6||1,885,472,000 |- | 110417||HL093||S2||AL-SCG-4_Plex-Feb14||Zhang Lab||80+6||1,944,884,000 |- | 110417||HL093||S3||AL-SCG-4_Plex-Feb14||Zhang Lab||80+6||1,926,253,000 |- | 110417||HL093||S4||AL-SCG-4_Plex-Feb14||Zhang Lab||80+6||1,886,033,000 |- | 110417||HL093||S5||AL-Genome-PGP1F-Jul30||Zhang Lab||80+6||2,231,073,000 |- | 110417||HL093||S6||AL-Genome-PGP1ips-Jul30||Zhang Lab||80+6||2,269,443,000 |- | 110417||HL093||S7||AL-Exome-HGPS(2)-Apr10||Zhang Lab||80+6||2,863,990,000 |- | 110417||HL093||S8||AL-Exome-HGPS(2)-Apr10||Zhang Lab||80+6||2,743,128,000 |- | 110408||HL092||S1||Al-Exome-HFF1013-Mar18||Zhang Lab||100+6||2,522,988,000 |- | 110408||HL092||S2||Al-Exome-e75#4-Mar18||Zhang Lab||100+6||2,567,812,000 |- | 110408||HL092||S3||AL-SCG-4_Plex-Feb14||Zhang Lab||100+6||197,385,000 |- | 110408||HL092||S4||AL-SCG-4_Plex-Feb14||Zhang Lab||100+6||208,528,000 |- | 110408||HL092||S5||AL-Genome-PGP1F-Jul30||Zhang Lab||100+6||798,720,000 |- | 110408||HL092||S6||UCSD-MH-1_10-Mar28+JG-Microbiome-Ecoli_test-Mar22||Zhang Lab||100+6||2,548,739,000 |- | 110408||HL092||S7||UCSD-MH-11_21-Mar28+JG-Microbiome-Ecoli_test-Mar22||Zhang Lab||100+6||2,359,216,000 |- | 110408||HL092||S8||AL-Genome-PGP1ips-Jul30||Zhang Lab||100+6||850,078,000 |- | 110323||HL091||S1||NP-220K-Belmonte_Ind8-12-March10||Zhang Lab||100+6||2,756,670,000 |- | 110323||HL091||S2||NP-220K-Belmonte_Ind8-12-March10||Zhang Lab||100+6||2,858,982,000 |- | 110323||HL091||S3||Al-Exome-e7B#1-Mar18||Zhang Lab||100+6||3,856,415,000 |- | 110323||HL091||S4||Al-Exome-e7B#1-Mar18||Zhang Lab||100+6||3,829,631,000 |- | 110323||HL091||S5||Al-Exome-e7A#1-Mar18||Zhang Lab||100+6||3,659,345,000 |- | 110323||HL091||S6||Al-Exome-e7A#1-Mar18||Zhang Lab||100+6||3,652,533,000 |- | 110323||HL091||S7||Al-Exome-HFF1013-Mar18||Zhang Lab||100+6||3,768,226,000 |- | 110323||HL091||S8||Al-Exome-e75#4-Mar18||Zhang Lab||100+6||3,227,472,000 |- | 110318||HL090||S1||AL-Exome-cAWS#1-Mar18||Zhang Lab||80|| |- | 110318||HL090||S2||AL-Exome-cAWS#1-Mar18||Zhang Lab||80|| |- | 110318||HL090||S3||AL-Exome-HGPS-Mar18||Zhang Lab||80|| |- | 110318||HL090||S4||AL-Exome-HGPS-Mar18||Zhang Lab||80|| |- | 110318||HL090||S5||AL-Exome-cHGPS#1-Mar18||Zhang Lab||80|| |- | 110318||HL090||S6||AL-Exome-cHGPS#1-Mar18||Zhang Lab||80|| |- | 110318||HL090||S7||Al-Exome-AWS-Mar18||Zhang Lab||80|| |- | 110318||HL090||S8||Al-Exome-AWS-Mar18||Zhang Lab||80|| |- | 110307||HL089||S1||NP-220K-PGP_Exp1-3_Ind1-7-Feb14||Zhang Lab||80+6+80|| |- | 110307||HL089||S2||NP-220K-PGP_Exp1-3_Ind1-7-Feb14||Zhang Lab||80+6+80|| |- | 110307||HL089||S3||NP-220K-Parkinson_Ind1-18-Feb15||Zhang Lab||80+6+80|| |- | 110307||HL089||S4||NP-220K-Parkinson_Ind1-18-Feb15||Zhang Lab||80+6+80|| |- | 110307||HL089||S5||NP-220K-Parkinson_Ind1-18-Feb15||Zhang Lab||80+6+80|| |- | 110307||HL089||S6||NP-220K-Parkinson_Ind1-18-Feb15||Zhang Lab||80+6+80|| |- | 110307||HL089||S7||NP-220K-Parkinson_Ind1-18-Feb15||Zhang Lab||80+6+80|| |- | 110307||HL089||S8||NP-220K-Parkinson_Ind1-18-Feb15||Zhang Lab||80+6+80|| |- | 110303||HL088||S1||AL-MsExome-2eiPS2P5-Feb4||Zhang Lab||80+6||2,735,432,000 |- | 110303||HL088||S2||AL-MsExome-2eiPS2P5-Feb4||Zhang Lab||80+6||2,802,442,000 |- | 110303||HL088||S3||AL-MsExome-Ie12P20-Feb4||Zhang Lab||80+6||2,676,336,000 |- | 110303||HL088||S4||AL-MsExome-Ie12P20-Feb4||Zhang Lab||80+6||2,683,055,000 |- | 110303||HL088||S5||AL-MsExome-B6MEF-Feb4||Zhang Lab||80+6||2,612,353,000 |- | 110303||HL088||S6||AL-MsExome-B6MEF-Feb4||Zhang Lab||80+6||2,650,632,000 |- | 110303||HL088||S7||AL-Exome-HuSc-Mar2||Zhang Lab||80+6||2,688,100,000 |- | 110303||HL088||S8||NP-220K-African_UPenn1_3-Feb16||Zhang Lab||80+6||2,856,129,000 |- | 110119||HL087||S1||AL-exome-2HFF_P6-Jan16||Zhang Lab||80+7+80||3,152,150,000 |- | 110119||HL087||S2||AL-exome-2HFF_7_10_3M-Jan16||Zhang Lab||80+7+80||3,216,929,000 |- | 110119||HL087||S3||AL-exome-2HFF_8d_10-Jan16||Zhang Lab||80+7+80||3,230,879,000 |- | 110119||HL087||S4||HC-MDA-Ecoli-SAGs(NX1-NX8)-Jan17||Zhang Lab||80+7+80||2,531,830,000 |- | 110119||HL087||S5||MouseMetaGen.SetA.Ind13to16-Dec15||Zhang Lab||80+7+80||2,831,831,000 |- | 110119||HL087||S6||MouseMetaGen.SetA.Ind13to16-Dec15||Zhang Lab||80+7+80||2,788,825,000 |- | 110119||HL087||S7||MouseMetaGen.SetA.Ind13to16-Dec15||Zhang Lab||80+7+80||2,804,556,000 |- | 110119||HL087||S8||MouseMetaGen.SetA.Ind13to16-Dec15||Zhang Lab||80+7+80||2,755,653,000 |- | 110112||HL086||S1||NP-PGP.Ind13to21-Dec14||Zhang Lab||100+6||2,946,977,000 |- | 110112||HL086||S2||NP-PGP.Ind13to21-Dec14||Zhang Lab||100+6||3,142,124,000 |- | 110112||HL086||S3||NP-PGP.Ind13to21-Dec14||Zhang Lab||100+6||3,043,874,000 |- | 110112||HL086||S4||NP-PGP.Ind13to21-Dec14||Zhang Lab||100+6||3,134,949,000 |- | 110112||HL086||S5||NP-PGP.Ind13to21-Dec14||Zhang Lab||100+6||3,031,047,000 |- | 110112||HL086||S6||NP-TumorJHU.Ind1to48-Dec18||Zhang Lab||100+6||3,476,486,000 |- | 110112||HL086||S7||NP-AfricanUPenn.Ind1to48-Jan3||Zhang Lab||100+6||3,599,069,000 |- | 110112||HL086||S8||NP-AfricanUPenn.Ind1to48-Jan3||Zhang Lab||100+6||3,505,520,000 |} ==2010== ===Jul-Dec=== {| {{table}} | align="center" style="background:#f0f0f0;"|'''Date''' | align="center" style="background:#f0f0f0;"|'''Run''' | align="center" style="background:#f0f0f0;"|'''Lane''' | align="center" style="background:#f0f0f0;"|'''Tube Label''' | align="center" style="background:#f0f0f0;"|'''Seq facility''' | align="center" style="background:#f0f0f0;"|'''Read length''' | align="center" style="background:#f0f0f0;"|'''# filtered reads (bps)''' |- | 101209||HL085||S1||AL-Exome-aMSC_p7-Dec7||Zhang Lab||80+7+80||2,801,366,000 |- | 101209||HL085||S2||AL-Exome-MSC_iPS4_p14-Dec7||Zhang Lab||80+7+80||2,963,206,000 |- | 101209||HL085||S3||AL-Exome-MSC_iPS8_p14-Dec7||Zhang Lab||80+7+80||3,149,351,000 |- | 101209||HL085||S4||AL-Exome-KiPS3F7_p29-Dec7||Zhang Lab||80+7+80||2,935,861,000 |- | 101209||HL085||S5||NP-Mm-IMR90-Nov23||Zhang Lab||80+7+80||2,590,543,000 |- | 101209||HL085||S6||NP-Mm-IMR90-Nov23||Zhang Lab||80+7+80||2,572,362,000 |- | 101209||HL085||S7||NP-Mm-IMR90-Nov23||Zhang Lab||80+7+80||2,587,222,000 |- | 101209||HL085||S8||KZ-Lancelet_3_Lib-Sep10||Zhang Lab||80+7+80||2,103,198,000 |- | 101203||HL084||S1||AL-Exome-Olf_MSC-Nov30_Nextera||Zhang Lab||80||2,832,310,000 |- | 101203||HL084||S2||AL-Exome-Olf_MSC-Nov30_Nextera||Zhang Lab||80||2,848,472,000 |- | 101203||HL084||S3||AL-Exome-Olf_CD34+-Nov30_Nextera||Zhang Lab||80||2,484,395,000 |- | 101203||HL084||S4||AL-Exome-Olf_CD34+-Nov30_Nextera||Zhang Lab||80||2,506,430,000 |- | 101203||HL084||S5||AL-Exome-KiPS-Nov30_Nextera||Zhang Lab||80||2,774,503,000 |- | 101203||HL084||S6||AL-Exome-KiPS-Nov30_Nextera||Zhang Lab||80||2,827,796,000 |- | 101203||HL084||S7||AL-Exome-KiPS_CD34+-Nov30_Nextera||Zhang Lab||80||2,686,185,000 |- | 101203||HL084||S8||AL-Exome-KiPS_CD34+-Nov30_Nextera||Zhang Lab||80||2,625,599,000 |- | 101123||HL083||S1||AL-Exome-FiPS_4F5_P15-Nov22||Zhang Lab||80+7+80||2,866,535,000 |- | 101123||HL083||S2||AL-Exome-FiPS_4F5_P44-Nov22||Zhang Lab||80+7+80||2,786,330,000 |- | 101123||HL083||S3||AL-Exome-Plvthm_Rb4_D_P10-Nov12||Zhang Lab||80+7+80||2,663,488,000 |- | 101123||HL083||S4||HC-MDA-Ecoli-SAGs(Ind1to8)-Nov15||Zhang Lab||80+7+80||2,809,612,000 |- | 101123||HL083||S5||AL-Exome-HFF_P5-Nov22||Zhang Lab||80+7+80||3,075,773,000 |- | 101123||HL083||S6||AL-Exome-38H1C_6_P10-Nov22||Zhang Lab||80+7+80||2,680,754,000 |- | 101123||HL083||S7||NP-SAG-MouseGutSetb-Nov4||Zhang Lab||80+7+80||3,067,120,000 |- | 101123||HL083||S8||UCSD-BB-TM_Solexa1-Oct28||Zhang Lab||80+7+80||1,836,366,000 |- | 101117||HL082||S1||AL-Exome-FiPS_4F2_P9-Nov12||Zhang Lab||80||2,320,956,000 |- | 101117||HL082||S2||AL-Exome-FiPS_4F2_P9-Nov12||Zhang Lab||80||2,404,301,000 |- | 101117||HL082||S3||AL-Exome-FiPS_4F2_P40-Nov12||Zhang Lab||80||2,422,202,000 |- | 101117||HL082||S4||AL-Exome-FiPS_4F2_P40-Nov12||Zhang Lab||80||2,425,803,000 |- | 101117||HL082||S5||AL-Exome-Plvthm_Rb4_5_P10-Nov12||Zhang Lab||80||2,451,276,000 |- | 101117||HL082||S6||AL-Exome-Plvthm_Rb4_5_P10-Nov12||Zhang Lab||80||2,459,732,000 |- | 101117||HL082||S7||AL-Exome-IMR90_P4-Nov12||Zhang Lab||80||2,549,279,000 |- | 101117||HL082||S8||AL-Exome-IMR90_P4-Nov12||Zhang Lab||80||2,470,636,000 |- | 101108||HL081||S1||KZ-Lancelet_3_Lib-Sep10||Zhang Lab||80+7+80||2,345,534,000 |- | 101108||HL081||S2||KZ-Lancelet_3_Lib-Sep10||Zhang Lab||80+7+80||2,413,314,000 |- | 101108||HL081||S3||KZ-Lancelet_3_Lib-Sep10||Zhang Lab||80+7+80||2,407,128,000 |- | 101108||HL081||S4||KZ-Lancelet_3_Lib-Sep10||Zhang Lab||80+7+80||2,413,251,000 |- | 101108||HL081||S5||KZ-Lancelet_3_Lib-Sep10||Zhang Lab||80+7+80||2,409,447,000 |- | 101108||HL081||S6||NP-SAG-MouseGutSetA.Ind1-12-Oct28||Zhang Lab||80+7+80||3,044,539,000 |- | 101108||HL081||S7||NP-SAG-MouseGutSetA.Ind1-12-Oct28||Zhang Lab||80+7+80||3,008,164,000 |- | 101108||HL081||S8||NP-SAG-MouseGutSetA.Ind1-12-Oct28||Zhang Lab||80+7+80||2,928,597,000 |- | 101030||HL080||S1||DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23||Zhang Lab||80+7+80||1,295,516,000 |- | 101030||HL080||S2||NP-SAG-MouseGutSetA.Ind1-12-Oct28||Zhang Lab||80+7+80||1,677,814,000 |- | 101030||HL080||S3||UCSD-BB-TM_Solexa1-Oct28||Zhang Lab||80+7+80||1,168,578,000 |- | 101030||HL080||S4||KZ-Lancelet_6_Lib-Se10||Zhang Lab||80+7+80||143,044,000 |- | 101030||HL080||S5||KZ-Lancelet_6_Lib-Se10||Zhang Lab||80+7+80||142,647,000 |- | 101030||HL080||S6||KZ-Lancelet_6_Lib-Se10||Zhang Lab||80+7+80||152,233,000 |- | 101030||HL080||S7||KZ-Lancelet_6_Lib-Se10||Zhang Lab||80+7+80||148,587,000 |- | 101030||HL080||S8||KZ-Lancelet_3_Lib-Sep10||Zhang Lab||80+7+80||1,934,932,000 |- | 101026||HL079||S1||AL-Exome-MMTA-Jun29-Belmonte1||Zhang Lab||80+7||1,377,624,000 |- | 101026||HL079||S2||AL-Exome-MMTA-Jun29-Belmonte1||Zhang Lab||80+7||1,217,203,000 |- | 101026||HL079||S3||JG-PGP1-Chr-Lib-Oct22||Zhang Lab||80+7||474,667,000 |- | 101026||HL079||S4||DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23||Zhang Lab||80+7||1,428,659,000 |- | 101026||HL079||S5||DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23||Zhang Lab||80+7||1,191,736,000 |- | 101026||HL079||S6||DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23||Zhang Lab||80+7||1,956,053,000 |- | 101026||HL079||S7||DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX||Zhang Lab||80+7||1,978,414,000 |- | 101026||HL079||S8||DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX||Zhang Lab||80+7||1,924,357,000 |- | 101021||HL078||S1||AL-Exome-hNSC-Aug14-Belmonte ||Zhang Lab||80+7|| |- | 101021||HL078||S2||AL-Exome-hNSC-Aug14-Belmonte ||Zhang Lab||80+7|| |- | 101021||HL078||S3||AL-Exome-NiPS2F-Aug14-Belmonte ||Zhang Lab||80+7|| |- | 101021||HL078||S4||AL-Exome-NiPS2F-Aug14-Belmonte ||Zhang Lab||80+7|| |- | 101021||HL078||S5||DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23||Zhang Lab||80+7|| |- | 101021||HL078||S6||DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23||Zhang Lab||80+7|| |- | 101021||HL078||S7||DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX||Zhang Lab||80+7|| |- | 101021||HL078||S8||DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX||Zhang Lab||80+7|| |- | 101016||HL077||S1||AL-Exome-AST-Oct4||Zhang Lab||80+7||1,913,314,000 |- | 101016||HL077||S2||AL-Exome-AST-Oct4||Zhang Lab||80+7||1,977,248,000 |- | 101016||HL077||S3||AL-Exome-ASTiPS4F_4-Oct4||Zhang Lab||80+7||2,205,330,000 |- | 101016||HL077||S4||AL-Exome-ASTiPS4F_4-Oct4||Zhang Lab||80+7||2,146,837,000 |- | 101016||HL077||S5||AL-Exome-ASTiPS4F_5-Oct4||Zhang Lab||80+7||2,449,641,000 |- | 101016||HL077||S6||AL-Exome-ASTiPS4F_5-Oct4||Zhang Lab||80+7||2,504,974,000 |- | 101016||HL077||S7||AL-Exome-HUViPS4F1-Aug14-Belmonte||Zhang Lab||80+7||1,664,126,000 |- | 101016||HL077||S8||DD-DMR220K-BJiPS_Rebalanced-Sep23||Zhang Lab||80+7||1,909,981,000 |- | 101012||AL009||S1||AG-Exome-OAT_F-Oct12||Zhang Lab||80||2,119,404,000 |- | 101012||AL009||S2||AG-Exome-OAT_12-Oct12||Zhang Lab||80||2,093,540,000 |- | 101012||AL009||S3||AG-Exome-OAT_12.4-Oct12||Zhang Lab||80||1,901,899,000 |- | 101012||AL009||S4||AG-Exome-OAT_12.4.2-Oct12||Zhang Lab||80||1,948,886,000 |- | 101012||AL009||S5||AG-Exome-B4-Oct12||Zhang Lab||80||1,846,700,000 |- | 101012||AL009||S6||AG-Exome-1034I-Oct12||Zhang Lab||80||1,964,239,000 |- | 101012||AL009||S7||AG-Exome-1000F-Oct12||Zhang Lab||80||1,940,870,000 |- | 101012||AL009||S8||AG-Exome-1000I-Oct12||Zhang Lab||80||2,028,039,000 |- | 101008||DD003||S1||AG-Exome-OAT_F-Oct12||Zhang Lab||80||1,219,289,000 |- | 101008||DD003||S2||AG-Exome-OAT_12-Oct12||Zhang Lab||80||1,620,779,000 |- | 101008||DD003||S3||AG-Exome-OAT_12.4-Oct12||Zhang Lab||80||1,526,898,000 |- | 101008||DD003||S4||AG-Exome-OAT_12.4.2-Oct12||Zhang Lab||80||1,713,981,000 |- | 101008||DD003||S5||AG-Exome-B4-Oct12||Zhang Lab||80||1,546,025,000 |- | 101008||DD003||S6||AG-Exome-1034I-Oct12||Zhang Lab||80||1,546,654,000 |- | 101008||DD003||S7||AG-Exome-1000F-Oct12||Zhang Lab||80||1,634,594,000 |- | 101008||DD003||S8||AG-Exome-1000I-Oct12||Zhang Lab||80||2,013,521,000 |- | 101006||HL075||S1||HMS-C2U-12Plex-Sep29||Zhang Lab||36+6||849,634,000 |- | 101006||HL075||S2||HMS-C2U-12Plex-Sep29||Zhang Lab||36+6||877,326,000 |- | 101006||HL075||S3||HMS-C2U-12Plex-Sep29||Zhang Lab||36+6||881,302,000 |- | 101006||HL075||S4||HMS-C2U-12Plex-Sep29||Zhang Lab||36+6||866,372,000 |- | 101006||HL075||S5||HMS-C2U-12Plex-Sep29||Zhang Lab||36+6||845,377,000 |- | 101006||HL075||S6||HMS-C2U-12Plex-Sep29||Zhang Lab||36+6||825,983,000 |- | 101006||HL075||S7||HMS-C2U-12Plex-Sep29||Zhang Lab||36+6||865,950,000 |- | 101006||HL076||S8||HMS-C2U-12Plex-Sep29||Zhang Lab||36+6||849,742,000 |- | 100925||HL075||S1||KZ-Lancelet_3_Lib-Sep10||Zhang Lab||80+80+7||1,391,455,000 |- | 100925||HL075||S2||KZ-Lancelet_3_Lib-Sep10||Zhang Lab||80+80+7||1,483,815,000 |- | 100925||HL075||S3||KZ-Lancelet_3_Lib-Sep10||Zhang Lab||80+80+7||1,433,906,000 |- | 100925||HL075||S4||KZ-Lancelet_3_Lib-Sep10||Zhang Lab||80+80+7||1,163,263,000 |- | 100925||HL075||S5||KZ-Lancelet_6_Lib-Se10||Zhang Lab||80+80+7||1,951,079,000 |- | 100925||HL075||S6||KZ-Lancelet_6_Lib-Se10||Zhang Lab||80+80+7||2,373,404,000 |- | 100925||HL075||S7||DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX||Zhang Lab||80+80+7||2,057,108,000 |- | 100925||HL075||S8||DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23||Zhang Lab||80+80+7||2,212,734,000 |- | 100921||HL074||S1||AL-Exome-iPS16-1-Sep17||Zhang Lab||80||1,472,681,000 |- | 100921||HL074||S2||Al-Exome-iPS16-4-Sep17||Zhang Lab||80||1,495,036,000 |- | 100921||HL074||S3||AL-Exome-PGP1.2_iPS#2_P38-Sep17||Zhang Lab||80||1,867,962,000 |- | 100921||HL074||S4||AL-Exome-dH1_cf16-Sep17||Zhang Lab||80||1,456,431,000 |- | 100921||HL074||S5||AL-Exome-NiPS2F-Aug14-Belmonte ||Zhang Lab||80||1,062,524,000 |- | 100921||HL074||S6||AL-Exome-HUViPS4F3-Aug14-Belmonte||Zhang Lab||80||1,174,766,000 |- | 100921||HL074||S7||AL-Exome-HUViPS4F1-Aug14-Belmonte||Zhang Lab||80||609,446,000 |- | 100921||HL074||S8||AL-Exome-Huvec-Aug14-Belmonte||Zhang Lab||80||1,276,503,000 |- | 100917||HL073||S1||AL-Exome-iPS16-1-Sep17||Zhang Lab||80||742,023,000 |- | 100917||HL073||S2||AL-Exome-iPS16-1-Sep17||Zhang Lab||80||789,931,000 |- | 100917||HL073||S3||Al-Exome-iPS16-4-Sep17||Zhang Lab||80||850,349,000 |- | 100917||HL073||S4||Al-Exome-iPS16-4-Sep17||Zhang Lab||80||855,557,000 |- | 100917||HL073||S5||AL-Exome-PGP1.2_iPS#2_P38-Sep17||Zhang Lab||80||831,524,000 |- | 100917||HL073||S6||AL-Exome-PGP1.2_iPS#2_P38-Sep17||Zhang Lab||80||726,195,000 |- | 100917||HL073||S7||AL-Exome-dH1_cf16-Sep17||Zhang Lab||80||707,288,000 |- | 100917||HL073||S8||AL-Exome-dH1_cf16-Sep17||Zhang Lab||80||755,538,000 |- | 100813||HL072||S1||KZ-GM20431 HSCHR LIB-Sep10||Zhang Lab||60+7||651,630,000 |- | 100813||HL072||S2||KZ-GM20431 HSCHR LIB-Sep10||Zhang Lab||60+7||694,169,000 |- | 100813||HL072||S3||KZ-Lancelet_3_Lib-Sep10||Zhang Lab||60+7||658,430,000 |- | 100813||HL072||S4||KZ-Lancelet_3_Lib-Sep10||Zhang Lab||60+7||646,324,000 |- | 100813||HL072||S5||KZ-Lancelet_6_Lib-Se10||Zhang Lab||60+7||700,011,000 |- | 100813||HL072||S6||KZ-Lancelet_6_Lib-Se10||Zhang Lab||60+7||709,104,000 |- | 100813||HL072||S7||KZ-Lancelet_8_Lib-Sep10||Zhang Lab||60+7||0 |- | 100813||HL072||S8||KZ-Lancelet_8_Lib-Sep10||Zhang Lab||60+7||0 |- | 100824||HL071||S1||HMS-GC-Exome-Exome_pair_3_C-Aug13||Zhang Lab||60+7||1,239,473,000 |- | 100824||HL071||S2||AL-Exome-HUViPS4F3-Aug14-Belmonte||Zhang Lab||60+7||1,479,578,000 |- | 100824||HL071||S3||AL-Exome-Huvec-Aug14-Belmonte||Zhang Lab||60+7||1,420,862,000 |- | 100824||HL071||S4||AL-Exome-FiPS4F7-Aug14-Belmonte ||Zhang Lab||60+7||1,272,738,000 |- | 100824||HL071||S5||HL-ASE-gDNA-Aug16||Zhang Lab||60+7||1,358,927,000 |- | 100824||HL071||S6||HL-ASE-gDNA-Aug16||Zhang Lab||60+7||1,063,216,000 |- | 100824||HL071||S7||HL-ASE-cDNA-Aug16||Zhang Lab||60+7||1,449,370,000 |- | 100824||HL071||S8||HL-ASE-cDNA-Aug16||Zhang Lab||60+7||1,422,238,000 |- | 100818||HL070||S1||AL-Exome-NiPS2F-Aug14-Belmonte ||Zhang Lab||80||1,725,932,000 |- | 100818||HL070||S2||AL-Exome-HUViPS4F3-Aug14-Belmonte||Zhang Lab||80||1,429,202,000 |- | 100818||HL070||S3||AL-Exome-HUViPS4F1-Aug14-Belmonte||Zhang Lab||80||1,511,891,000 |- | 100818||HL070||S4||AL-Exome-Huvec-Aug14-Belmonte||Zhang Lab||80||1,361,743,000 |- | 100818||HL070||S5||AL-Exome-hNSC-Aug14-Belmonte ||Zhang Lab||80||1,419,623,000 |- | 100818||HL070||S6||AL-Exome-FiPS4F7-Aug14-Belmonte ||Zhang Lab||80||1,257,985,000 |- | 100818||HL070||S7||HMS-GC-Exome-Exome_pair_6_A-Aug13||Zhang Lab||80||1,072,036,000 |- | 100818||HL070||S8||HMS-GC-Exome-Exome_pair_6_C-Aug13||Zhang Lab||80||1,019,104,000 |- | 100814||HL069||S1||HMS-GC-Exome-Exome_pair_1_A-Aug13||Zhang Lab||60||1,218,075,000 |- | 100814||HL069||S2||HMS-GC-Exome-Exome_pair_1_C-Aug13||Zhang Lab||60||1,269,759,000 |- | 100814||HL069||S3||HMS-GC-Exome-Exome_pair_2_A-Aug13||Zhang Lab||60||1,347,416,000 |- | 100814||HL069||S4||HMS-GC-Exome-Exome_pair_2_C-Aug13||Zhang Lab||60||1,282,516,000 |- | 100814||HL069||S5||HMS-GC-Exome-Exome_pair_3_A-Aug13||Zhang Lab||60||1,116,590,000 |- | 100814||HL069||S6||HMS-GC-Exome-Exome_N6_FL-Aug13||Zhang Lab||60||1,232,492,000 |- | 100814||HL069||S7||HMS-GC-Exome-Exome_N6_Cer-Aug13||Zhang Lab||60||1,411,421,000 |- | 100814||HL069||S8||KZ-B.Jap-1_300bp_Lib-Aug5||Zhang Lab||60||0 |- | 100807||HL068||S1||AL-Genome-CVF-Jul30||Zhang Lab||60+7||1,212,756,000 |- | 100807||HL068||S2||AL-Genome-PGP1ips-Jul30||Zhang Lab||60+7||1,755,545,000 |- | 100807||HL068||S3||AL-Genome-CVIB-Jul30||Zhang Lab||60+7||1,301,693,000 |- | 100807||HL068||S4||DD-BSPP-CpG97K-13066B09-B28||Zhang Lab||60+7||1,185,514,000 |- | 100807||HL068||S5||KZ-ASE-DNA-Jul22||Zhang Lab||60+7||875,399,000 |- | 100807||HL068||S6||KZ-ASE-DNA-Jul22||Zhang Lab||60+7||824,990,000 |- | 100807||HL068||S7||HL-ASE-cDNA-Jul26||Zhang Lab||60+7||1,260,545,000 |- | 100807||HL068||S8||HL-ASE-cDNA-Jul26||Zhang Lab||60+7||1,340,234,000 |- | 100802||HL067||S1||KZ-ASE-DNA-Jul22||Zhang Lab||40||0 |- | 100802||HL067||S2||HL-ASE-cDNA-Jul26||Zhang Lab||40||0 |- | 100802||HL067||S3||HC-MDA-Ecoli_90m_C-Jul30||Zhang Lab||40||920,399,000 |- | 100802||HL067||S4||HC-MDA-Ecoli_10hr_C-Jul30||Zhang Lab||40||912,392,000 |- | 100802||HL067||S5||AL-Exome-CV13-Jul25||Zhang Lab||40||1,183,539,000 |- | 100802||HL067||S6||AL-Genome-PGP1F-Jul30||Zhang Lab||40||1,038,403,000 |- | ||||||AL-Genome-17L_ANK-Jul30|||||| |- | 100802||HL067||S7||AL-Genome-17L_HK1-Jul30||Zhang Lab||40||699,527,000 |- | ||||||AL-Genome-17L_SLN-Jul30|||||| |- | ||||||PhiX|||||| |- | 100802||HL067||S8||AL-Genome-PGP1F-Jul30||Zhang Lab||40||1,062,689,000 |- | 100726||HL066||S1||AL-Exome-CV11-Jul25||Zhang Lab||80||1,809,265,000 |- | 100726||HL066||S2||AL-Exome-CV11-Jul25||Zhang Lab||80||1,932,617,000 |- | 100726||HL066||S3||Al-Exome-CV12-Jul25||Zhang Lab||80||1,867,404,000 |- | 100726||HL066||S4||Al-Exome-CV12-Jul25||Zhang Lab||80||987,605,000 |- | 100726||HL066||S5||AL-Exome-CV13-Jul25||Zhang Lab||80||303,021,000 |- | 100726||HL066||S6||AL-Exome-CV13-Jul25||Zhang Lab||80||604,097,000 |- | 100726||HL066||S7||AL-Exome-56JW-Jul25-Vanderbilt||Zhang Lab||80||616,688,000 |- | 100726||HL066||S8||AL-Exome-56JW-Jul25-Vanderbilt||Zhang Lab||80||1,754,710,000 |- | 100721||HL065||S1||AL-Exome-CF_1.4-Jul10-Daley5||Zhang Lab||80||1,456,489,000 |- | 100721||HL065||S2||DD-BSPP-CpG97K-05215B09-Mar18-B10||Zhang Lab||80||1,493,011,000 |- | 100721||HL065||S3||AL-Exome-FiPS_3F1-Jul20||Zhang Lab||80||1,695,531,000 |- | 100721||HL065||S4||AL-Exome-FiPS_3F1-Jul20||Zhang Lab||80||1,701,866,000 |- | 100721||HL065||S5||AL-Exome-HFFXF-Jul20||Zhang Lab||80||1,729,276,000 |- | 100721||HL065||S6||AL-Exome-HFFXF-Jul20||Zhang Lab||80||1,602,218,000 |- | 100721||HL065||S7||AL-Exome-KiPS_4F8-Jul20||Zhang Lab||80||1,592,717,000 |- | 100721||HL065||S8||AL-Exome-KiPS_4F8-Jul20||Zhang Lab||80||1,688,181,000 |- | 100717||HL064||S1||KZ-BSPP_DMR220K-BJiPS-Jul10||Zhang Lab||80||1,542,764,000 |- | 100717||HL064||S2||AL-Exome-dHiF-Jun25-Daley1||Zhang Lab||80||1,488,881,000 |- | 100717||HL064||S3||DD-BSPP-PGP1iPS_Jun22-CPG97K+30K||Zhang Lab||80||1,462,284,000 |- | 100717||HL064||S4||DD-BSPP_CPG97K-PGP1Fib-Jul16 ||Zhang Lab||80||1,189,205,000 |- | 100717||HL064||S5||DD-BSPP_CPG97K-01192B09-Jul14-B1||Zhang Lab||80||1,361,170,000 |- | 100717||HL064||S6||DD-BSPP_CPG97K-01373A17-Jul14-B3||Zhang Lab||80||1,420,433,000 |- | 100717||HL064||S7||DD-BSPP_CPG97K-01373B09-Jul14-B4||Zhang Lab||80||1,352,159,000 |- | 100717||HL064||S8||DD-BSPP_CPG97K-07292B9-Jul16-BC14||Zhang Lab||80||1,489,737,000 |- | 100713||HL063||S1||AL-Exome-CF_Fib-Jul10-Daley4||Zhang Lab||80||1,588,122,000 |- | 100713||HL063||S2||AL-Exome-CF_Fib-Jul10-Daley4||Zhang Lab||80||1,616,900,000 |- | 100713||HL063||S3||AL-Exome-CF_1.4-Jul10-Daley5||Zhang Lab||80||1,644,859,000 |- | 100713||HL063||S4||AL-Exome-CF_1.4-Jul10-Daley5||Zhang Lab||80||1,632,408,000 |- | 100713||HL063||S5||AL-Exome-CF_1.9-Jul10-Daley6||Zhang Lab||80||1,569,908,000 |- | 100713||HL063||S6||AL-Exome-CF_1.9-Jul10-Daley6||Zhang Lab||80||1,573,677,000 |- | 100713||HL063||S7||AL-Exome-H1_P39-Jul10-Daley7||Zhang Lab||80||1,582,703,000 |- | 100713||HL063||S8||AL-Exome-H1_P39-Jul10-Daley7||Zhang Lab||80||1,559,342,000 |- | ||||||AL-DigiQ-PGP1F_L-Jun14|||||| |- | 100707||HL062||S1||AL-DigiQ-CVF_L-Jun14||Zhang Lab||40||495,632,000 |- | ||||||PhiX|||||| |- | ||||||AL-DigiQ-PGP1ips-Jun14|||||| |- | 100707||HL062||S2||AL-DigiQ-CViB-Jun14||Zhang Lab||40||557,121,000 |- | ||||||PhiX|||||| |- | ||||||AL-DigiQ-PGP1F-Jun14||Zhang Lab|||| |- | 100707||HL062||S3||AL-DigiQ-CVF-Jun14||Zhang Lab||40||513,397,000 |- | ||||||PhiX||Zhang Lab|||| |- | 100707||HL062||S4||AL-DigiQ-Clean-Jul6-PhiX-11_17_29||Zhang Lab||40||719,292,000 |- | 100707||HL062||S5||AL-DigiQ-Fib-Jul6-PhiX-11_17_29||Zhang Lab||40||718,808,000 |- | 100707||HL062||S6||AL-DigiQ-Mutation-Jul6-PhiX-11_17_29||Zhang Lab||40||740,698,000 |- | 100707||HL062||S7||JG-Microbiome-Ecoli1-July2||Zhang Lab||40||821,436,000 |- | 100707||HL062||S8||PhiX||Zhang Lab||40||604,827,000 |- | 100703||HL061_3||S1||AL-Exome-DF19.11b-Jul22-Thompson1||Zhang Lab||80||1,574,935 |- | 100703||HL061_3||S2||AL-Exome-DF19.11b-Jul22-Thompson1||Zhang Lab||80||1,638,913 |- | 100703||HL061_3||S3||AL-Exome-ips4.7-Jul22-Thompson2||Zhang Lab||80||1,576,439 |- | 100703||HL061_3||S4||AL-Exome-ips4.7-Jul22-Thompson2||Zhang Lab||80||1,556,867 |- | 100703||HL061_3||S5||Al-Exome-ips_dHiF8-Jun25-Daley2||Zhang Lab||80||1,944,840 |- | 100703||HL061_3||S6||AL-Exome-ips_dHiF9-Jun25-Daley3||Zhang Lab||80||1,990,985 |- | 100703||HL061_3||S7||DD-BSPP-HGPS72iPS_Jul2-CPG97K+30K||Zhang Lab||80||776,501 |- | 100703||HL061_3||S8||DD-BSPP-BJiPS_Jul2-CPG97K+30K||Zhang Lab||80||795,092 |- | 100701||HL061_2||S1||AL-Exome-DF19.11b-Jun22-Thompson1||Zhang Lab||||Failed |- | 100701||HL061_2||S2||AL-Exome-DF19.11b-Jun22-Thompson1||Zhang Lab||||Failed |- | 100701||HL061_2||S3||AL-Exome-ips4.7-Jun22-Thompson2||Zhang Lab||||Failed |- | 100701||HL061_2||S4||AL-Exome-ips4.7-Jun22-Thompson2||Zhang Lab||||Failed |- | 100701||HL061_2||S5||Al-Exome-ips_dHiF8-Jun25-Daley2||Zhang Lab||||Failed |- | 100701||HL061_2||S6||AL-Exome-ips_dHiF9-Jun25-Daley3||Zhang Lab||||Failed |- | 100701||HL061_2||S7||DD-BSPP-HGPS72iPS_Jun22-CPG97K+30K||Zhang Lab||||Failed |- | 100701||HL061_2||S8||DD-BSPP-BJiPS_Jun22-CPG97K+30K||Zhang Lab||||Failed |- | |} ===Jan-Jun=== {| {{table}} | align="center" style="background:#f0f0f0;"|'''Date''' | align="center" style="background:#f0f0f0;"|'''Run''' | align="center" style="background:#f0f0f0;"|'''Lane''' | align="center" style="background:#f0f0f0;"|'''Tube Label''' | align="center" style="background:#f0f0f0;"|'''Seq facility''' | align="center" style="background:#f0f0f0;"|'''Read length''' | align="center" style="background:#f0f0f0;"|'''# filtered reads (bps)''' |- | 100630||HL061||S1||AL-Exome-DF19.11b-Jun22-Thompson1||Zhang Lab||||Failed |- | 100630||HL061||S2||AL-Exome-DF19.11b-Jun22-Thompson1||Zhang Lab||||Failed |- | 100630||HL061||S3||AL-Exome-ips4.7-Jun22-Thompson2||Zhang Lab||||Failed |- | 100630||HL061||S4||AL-Exome-ips4.7-Jun22-Thompson2||Zhang Lab||||Failed |- | 100630||HL061||S5||Al-Exome-ips_dHiF8-Jun25-Daley2||Zhang Lab||||Failed |- | 100630||HL061||S6||AL-Exome-ips_dHiF9-Jun25-Daley3||Zhang Lab||||Failed |- | 100630||HL061||S7||DD-BSPP-HGPS72iPS_Jun22-CPG97K+30K||Zhang Lab||||Failed |- | 100630||HL061||S8||DD-BSPP-BJiPS_Jun22-CPG97K+30K||Zhang Lab||||Failed |- | 100627||HL060||S1||AL-Exome-dHiF-Jun25-Daley1||Zhang Lab||80||N/A |- | 100627||HL060||S2||AL-Exome-dHiF-Jun25-Daley1||Zhang Lab||80||N/A |- | 100627||HL060||S3||AL-Exome-DF19.11b-Jun22-Thompson1||Zhang Lab||80||N/A |- | 100627||HL060||S4||Al-Exome-ips_dHiF8-Jun25-Daley2||Zhang Lab||80||N/A |- | 100627||HL060||S5||Al-Exome-ips_dHiF8-Jun25-Daley2||Zhang Lab||80||N/A |- | 100627||HL060||S6||AL-Exome-ips_dHiF9-Jun25-Daley3||Zhang Lab||80||N/A |- | 100627||HL060||S7||AL-Exome-ips_dHiF9-Jun25-Daley3||Zhang Lab||80||N/A |- | 100627||HL060||S8||PhiX Control||Zhang Lab||80||N/A |- | 100623||HL059||S1||AL-Exome-DF19.11b-Jun22-Thompson1||Zhang Lab||N/A||Low Cluster Density |- | 100623||HL059||S2||AL-Exome-DF19.11b-Jun22-Thompson1||Zhang Lab||N/A||Low Cluster Density |- | 100623||HL059||S3||AL-Exome-ips4.7-Jun22-Thompson2||Zhang Lab||N/A||Low Cluster Density |- | 100623||HL059||S4||AL-Exome-ips4.7-Jun22-Thompson2||Zhang Lab||N/A||Low Cluster Density |- | 100623||HL059||S5||DD-BSPP-HGPS72iPS_Jun22-CPG97K+30K||Zhang Lab||N/A||Low Cluster Density |- | 100623||HL059||S6||DD-BSPP-BJiPS_Jun22-CPG97K+30K||Zhang Lab||N/A||Low Cluster Density |- | 100623||HL059||S7||DD-BSPP-PGP1iPS_Jun22-CPG97K+30K||Zhang Lab||N/A||Low Cluster Density |- | 100623||HL059||S8||KZ-?-BJ_iPSDMR220K-Jun8||Zhang Lab||N/A||Low Cluster Density |- | 100615||HL058_2||S1||AL-Exome-ips 11b-Eggan-Mar9 ||Zhang Lab||60|| |- | 100615||HL058_2||||AL-DigiQ-PGP1F_L-Jun14|||||| |- | 100615||HL058_2||S2||AL-DigiQ-CVF_L-Jun14||Zhang Lab||60||Low Cluster Density |- | 100615||HL058_2||||PhiX|||||| |- | 100615||HL058_2||S3||AL-exome-hFib 17-Eggan-Mar9||Zhang Lab||60|| |- | 100615||HL058_2||||AL-DigiQ-PGP1ips-Jun14|||||| |- | 100615||HL058_2||S4||AL-DigiQ-CViB-Jun14||Zhang Lab||60||Low Cluster Density |- | 100615||HL058_2||||PhiX|||||| |- | 100615||HL058_2||S5||AL-Exome-hFib29-Eggan-Mar9 ||Zhang Lab||60|| |- | 100615||HL058_2||S6||AL-Exome-29A_Eggan-Mar17 ||Zhang Lab||60|| |- | 100615||HL058_2||||AL-DigiQ-PGP1F-Jun14|||||| |- | 100615||HL058_2||S7||AL-DigiQ-CVF-Jun14||Zhang Lab||60||Low Cluster Density |- | 100615||HL058_2||||PhiX|||||| |- | 100615||HL058_2||S8||AL-Exome-ips 29e-Eggan-Mar9||Zhang Lab||60|| |- | 100612||HL058||S1||AL-Exome-ips 11b-Eggan-Mar9 ||Zhang Lab|||| |- | ||||||AL-DigiQ-PGP1F_L-Jun11|||||| |- | 100612||HL058||S2||AL-DigiQ-CVF_L-Jun11||Zhang Lab||||Low Cluster Density |- | ||||||PhiX|||||| |- | 100612||HL058||S3||AL-exome-hFib 17-Eggan-Mar9||Zhang Lab|||| |- | ||||||AL-DigiQ-PGP1ips-Jun11|||||| |- | 100612||HL058||S4||AL-DigiQ-CViB-Jun11||Zhang Lab||||Low Cluster Density |- | ||||||PhiX|||||| |- | 100612||HL058||S5||AL-Exome-hFib29-Eggan-Mar9 ||Zhang Lab|||| |- | 100612||HL058||S6||AL-Exome-29A_Eggan-Mar17 ||Zhang Lab|||| |- | ||||||AL-DigiQ-PGP1F-Jun11|||||| |- | 100612||HL058||S7||AL-DigiQ-CVF-Jun11||Zhang Lab||||Low Cluster Density |- | ||||||PhiX|||||| |- | 100612||HL058||S8||AL-Exome-ips 29e-Eggan-Mar9||Zhang Lab|||| |- | 100606||VCU||S1||AL-Exome-134GA-May3-Vanderbilt||VCU||80|| |- | 100606||VCU||S2||AL-Exome-134GA-May3-Vanderbilt||VCU||80|| |- | 100606||VCU||S3||AL-Exome-134LM-May3-Vanderbilt||VCU||80|| |- | 100606||VCU||S4||AL-Exome-134LM-May3-Vanderbilt||VCU||80|| |- | 100606||VCU||S5||Al-Exome-121DB-May3-Vanderbilt||VCU||80|| |- | 100606||VCU||S6||Al-Exome-121DB-May3-Vanderbilt||VCU||80|| |- | 100606||VCU||S7||AL-Exome-56JW-May3-Vanderbilt||VCU||80|| |- | 100606||VCU||S8||AL-Exome-56JW-May3-Vanderbilt||VCU||80|| |- | 100605||HL057||S1||VCU-Gao-GY2-May25||Zhang Lab||60|| |- | 100605||HL057||S2||VCU-Gao-GY3-May25||Zhang Lab||60|| |- | 100605||HL057||S3||VCU-Gao-GY4-May25||Zhang Lab||60|| |- | 100605||HL057||S4||VCU-Gao-GY5-May25||Zhang Lab||60|| |- | 100605||HL057||S5||VCU-Gao-GY6-May25||Zhang Lab||60|| |- | 100605||HL057||S6||VCU-Gao-GY7-May25||Zhang Lab||60|| |- | 100605||HL057||S7||VCU-Gao-GY8-May25||Zhang Lab||60|| |- | 100605||HL057||S8||PhiX||Zhang Lab||60|| |- | 100601||HL056||S1||Al-Exome-121BP-May3-Vanderbilt||Zhang Lab||80||2,295,676,000 |- | 100601||HL056||S2||Al-Exome-139TS-May3-Vanderbilt||Zhang Lab||80||2,389,689,000 |- | 100601||HL056||S3||AL-Exome-56JW-May3-Vanderbilt||Zhang Lab||80||2,003,056,000 |- | 100601||HL056||S4||Al-Exome-121DB-May3-Vanderbilt||Zhang Lab||80||2,294,729,000 |- | 100601||HL056||S5||Al-Exome-56WW-May3-Vanderbilt||Zhang Lab||80||2,028,859,000 |- | 100601||HL056||S6||AL-Exome-139TD-May3-Vanderbilt||Zhang Lab||80||1,991,602,000 |- | 100601||HL056||S7||AL-Exome-125GA-May3-Vanderbilt||Zhang Lab||80||2,138,804,000 |- | 100601||HL056||S8||Al-Exome-125DC-May3-Vanderbilt||Zhang Lab||80||2,014,180,000 |- | 100523||HL055||S1||Al-Exome-121BP-May3-Vanderbilt||Zhang Lab||80X2||2,064,140,000 |- | 100523||HL055||S2||Al-Exome-139TS-May3-Vanderbilt||Zhang Lab||80X2||2,146,818,000 |- | 100523||HL055||S3||AL-Exome-56JW-May3-Vanderbilt||Zhang Lab||80X2||1,757,982,000 |- | 100523||HL055||S4||Al-Exome-121DB-May3-Vanderbilt||Zhang Lab||80X2||2,009,833,000 |- | 100523||HL055||S5||Al-Exome-56WW-May3-Vanderbilt||Zhang Lab||80X2||1,965,460,000 |- | 100523||HL055||S6||AL-Exome-139TD-May3-Vanderbilt||Zhang Lab||80X2||1,957,803,000 |- | 100523||HL055||S7||AL-Exome-125GA-May3-Vanderbilt||Zhang Lab||80X2||1,977,461,000 |- | 100523||HL055||S8||Al-Exome-125DC-May3-Vanderbilt||Zhang Lab||80X2||1,896,028,000 |- | 100514||HL054||S1||Al-Exome-121BP-May3-Vanderbilt||Zhang Lab||80X2||2,055,502,000 |- | 100514||HL054||S2||Al-Exome-139TS-May3-Vanderbilt||Zhang Lab||80X2||2,109,831,000 |- | 100514||HL054||S3||AL-Exome-134GA-May3-Vanderbilt||Zhang Lab||80X2||2,115,594,000 |- | 100514||HL054||S4||AL-Exome-134LM-May3-Vanderbilt||Zhang Lab||80X2||2,145,899,000 |- | 100514||HL054||S5||Al-Exome-56WW-May3-Vanderbilt||Zhang Lab||80X2||2,071,626,000 |- | 100514||HL054||S6||AL-Exome-139TD-May3-Vanderbilt||Zhang Lab||80X2||1,959,635,000 |- | 100514||HL054||S7||AL-Exome-125GA-May3-Vanderbilt||Zhang Lab||80X2||1,985,925,000 |- | 100514||HL054||S8||Al-Exome-125DC-May3-Vanderbilt||Zhang Lab||80X2||1,973,832,000 |- | 100503||HL053||S1||AL-Exome-CViB-Apr23||Zhang Lab||80X2||1,948,897,000 |- | 100503||HL053||S2||AL-Exome-CViF-Apr25||Zhang Lab||80X2||2,076,896,000 |- | 100503||HL053||S3||AL-Exome-DF-Apr23||Zhang Lab||80X2||2,335,032,000 |- | 100503||HL053||S4||AL-Exome-FS-Apr23||Zhang Lab||80X2||2,433,140,000 |- | 100503||HL053||S5||AL-Exome-hFib11-apr23||Zhang Lab||80X2||2,083,124,000 |- | 100503||HL053||S6||HC-MDA_Mouse_2h_c4-Mar02||Zhang Lab||80X2||1,223,678,000 |- | 100503||HL053||S7||AL-Exome-ips17a-Apr23||Zhang Lab||80X2||1,453,812,000 |- | 100503||HL053||S8||AL-Exome-ips17b-Apr23||Zhang Lab||80X2||1,949,271,000 |- | 100429||HL052||S1||PhiX||Zhang Lab||18X2||64,904,000 |- | 100429||HL052||S2||PhiX||Zhang Lab||18X2||81,369,000 |- | 100429||HL052||S3||PhiX||Zhang Lab||18X2||79,289,000 |- | 100429||HL052||S4||PhiX||Zhang Lab||18X2||76,562,000 |- | 100429||HL052||S5||PhiX||Zhang Lab||18X2||72,647,000 |- | 100429||HL052||S6||PhiX||Zhang Lab||18X2||73,558,000 |- | 100429||HL052||S7||PhiX||Zhang Lab||18X2||72,909,000 |- | 100429||HL052||S8||PhiX||Zhang Lab||18X2||71,652,000 |- | 100425||DD002||S1||AL-Exome-CV1-Apr22-Nimblegen||Zhang Lab||80||1,985,894,000 |- | 100425||DD002||S2||JD-BSPP-Cmm09A-Oct4GFPiPs-Apr8-iPS||Zhang Lab||80||1,395,971,000 |- | 100425||DD002||S3||JD-BSPP-Cmm09A-mousePGC-Apr8-PGC||Zhang Lab||80||1,740,602,000 |- | 100425||DD002||S4||AL-Exome-CV1-Apr22-Nimbegen||Zhang Lab||80||1,872,065,000 |- | 100425||DD002||S5||DD-BSPP-CpG97K-AG01972p18-Apr22-A1||Zhang Lab||80||1,314,109,000 |- | 100425||DD002||S6||DD-BSPP-CpG97K-AG114p8p13-Apr22-A2||Zhang Lab||80||1,226,682,000 |- | 100425||DD002||S7||DD-BSPP-CpG97K-H9-Apr22||Zhang Lab||80||1,113,533,000 |- | 100425||DD002||S8||DD-BSPP-CpG97K-BJp13-Apr22-BJ||Zhang Lab||80||1,289,198,000 |- | 100420||HL051||S1||Zymo-M1-Apr16||Zhang Lab||40||457,916,000 |- | 100420||HL051||S2||Zymo-M2-Apr16||Zhang Lab||40||436,172,000 |- | 100420||HL051||S3||Zymo-M3-Apr16||Zhang Lab||40||354,544,000 |- | 100420||HL051||S4||Zymo-M4-Apr16||Zhang Lab||40||212,326,000 |- | 100420||HL051||S5||Zymo-H1-Apr16||Zhang Lab||40||558,978,000 |- | 100420||HL051||S6||Zymo-H2-Apr16||Zhang Lab||40||520,089,000 |- | ||||||HC-MDA_E.Coli_10h_5-Apr19|||||| |- | 100420||HL051||S7||HC-MDA_E.Coli_10h_6-Apr19||Zhang Lab||40||175,344,000 |- | ||||||PhiX|||||| |- | 100420||HL051||S8||HC-MDA_Mouse_2h_c4-Mar02||Zhang Lab||40||124,140,000 |- | 100415||HL050||S1||AL-Exome-ips 11a-Eggan-Mar9 ||Zhang Lab||80||1,228,095,000 |- | 100415||HL050||S2||AL-Exome-CV2- Apr12-Nimblegen||Zhang Lab||80||1,949,162,000 |- | 100415||HL050||S3||AL-Exome-CV2- Apr12-Nimblegen||Zhang Lab||80||1,783,540,000 |- | 100415||HL050||S4||AL-Exome-ips 11a-Eggan-Mar9 ||Zhang Lab||80||1,152,158,000 |- | 100415||HL050||S5||AL-Exome-CV3-Apr12-Nimblegen||Zhang Lab||80||1,617,660,000 |- | 100415||HL050||S6||AL-Exome-CV3-Apr12-Nimblegen||Zhang Lab||80||1,554,899,000 |- | 100415||HL050||S7||Al-Exome-CV4-Apr12-Nimblegen||Zhang Lab||80||1,975,782,000 |- | 100415||HL050||S8||Al-Exome-CV4-Apr12-Nimblegen||Zhang Lab||80||1,871,429,000 |- | 100411||HL049_2||S1||AL-exome-ips 11b-Eggan-Mar9 ||Zhang Lab||80||710,636,000 |- | 100411||HL049_2||S2||AL-Exome-PGP1F-Mar9-Agilent_Cell_Pellete||Zhang Lab||80||1,873,431,000 |- | 100411||HL049_2||S3||AL-Exome-PGP1F-Mar9-Agilent_Cell_Pellete||Zhang Lab||80||1,631,006,000 |- | 100411||HL049_2||S4||AL-exome-hFib 17-Eggan-Mar9||Zhang Lab||80||2,120,734,000 |- | 100411||HL049_2||S5||AL-Exome-ips 11a-Eggan-Mar9 ||Zhang Lab||80||608,718,000 |- | 100411||HL049_2||S6||AL-Exome-ips 11a-Eggan-Mar9 ||Zhang Lab||80||10,092,000 |- | 100411||HL049_2||S7||AL-Exome-ips 29e-Eggan-Mar9||Zhang Lab||80||509,138,000 |- | 100411||HL049_2||S8||AL-Exome-ips 29e-Eggan-Mar9||Zhang Lab||80||1,160,777,000 |- | 100407||DD001||S1||HMS-GC-Exome-PGP3||Zhang Lab||60||633,169,000 |- | 100407||DD001||S2||MCG-HS-EJ645-Feb26||Zhang Lab||60||1,214,095,000 |- | 100407||DD001||S3||MCG-HS-EJ656-Feb26||Zhang Lab||60||321,550,000 |- | 100407||DD001||S4||HMS-GC-Exome-PGP10||Zhang Lab||60||1,294,949,000 |- | 100407||DD001||S5||DD-BSPP-CpG97K-05215A18-Mar18-B9||Zhang Lab||60||956,968,000 |- | 100407||DD001||S6||DD-BSPP-CpG97K-05215B09-Mar18-B10||Zhang Lab||60||259,485,000 |- | 100407||DD001||S7||DD-BSPP-CpG97K-09351B09-Mar18-B22||Zhang Lab||60||856,623,000 |- | 100407||DD001||S8||DD-BSPP-CpG97K-13066B09-Mar18-B28||Zhang Lab||60||229,124,000 |- | 100401||HL048||S1||AL-Exome-PGP1_iPS_P16-Mar23-Nimblegen ||Zhang Lab||80||2,175,052,000 |- | 100401||HL048||S2||AL-Exome-PGP1_iPS_P16-Mar23-Nimblegen ||Zhang Lab||80||2,424,503,000 |- | 100401||HL048||S3||AL-Exome-PGP1F-Mar23-Nimblegen ||Zhang Lab||80||1,872,156,000 |- | 100401||HL048||S4||AL-Exome-PGP1F-Mar23-Nimblegen ||Zhang Lab||80||1,756,170,000 |- | 100401||HL048||S5||AL-Exome-hFib29-Eggan-Mar9 ||Zhang Lab||80||2,288,271,000 |- | 100401||HL048||S6||AL-Exome-hFib29-Eggan-Mar9 ||Zhang Lab||80||2,100,116,000 |- | 100401||HL048||S7||AL-Exome-29A_Eggan-Mar17 ||Zhang Lab||80||2,132,208,000 |- | 100401||HL048||S8||AL-Exome-29A_Eggan-Mar17 ||Zhang Lab||80||1,980,027,000 |- | 100326||HL047||S1||AL-Exome-CViB-Mar23-Nimblegen||Zhang Lab||80||2,064,171,000 |- | 100326||HL047||S2||AL-Exome-CViB-Mar23-Nimblegen||Zhang Lab||80||2,013,502,000 |- | 100326||HL047||S3||HMS-GC-Exome-PGP9-Feb24||Zhang Lab||80||2,298,166,000 |- | 100326||HL047||S4||HMS-GC-Exome-PGP2||Zhang Lab||80||2,627,795,000 |- | 100326||HL047||S5||HMS-GC-Exome-PGP3||Zhang Lab||80||716,842,000 |- | 100326||HL047||S6||HMS-GC-Exome-PGP3||Zhang Lab||80||722,736,000 |- | 100326||HL047||S7||AL-Exome-CVF-Mar23-Nimblegen||Zhang Lab||80||2,368,574,000 |- | 100326||HL047||S8||AL-Exome-CVF-Mar23-Nimblegen||Zhang Lab||80||2,290,573,000 |- | 100318||HL046_3||S1||AL-exome-hFib 17-Eggan-Mar9||Zhang Lab||80||272,118,000 |- | 100318||HL046_3||S2||AL-exome-hFib 11-Eggan-Mar9||Zhang Lab||80||3,874,000 |- | 100318||HL046_3||S3||AL-exome-ips 11b-Eggan-Mar9 ||Zhang Lab||80||62,172,000 |- | 100318||HL046_3||S4||AL-exome-ips 17a-Eggan-Mar9||Zhang Lab||80||1,530,000 |- | 100318||HL046_3||S5||AL-exome-ips 17b-Eggan-Mar9||Zhang Lab||80||1,418,802,000 |- | 100318||HL046_3||S6||AL-Exome-CViB-Feb21-Agilent||Zhang Lab||80||19,536,000 |- | 100318||HL046_3||S7||AL-Exome-CViB-Feb21-Agilent||Zhang Lab||80||70,512,000 |- | 100318||HL046_3||S8||MCG-HS-EJ657-Feb26||Zhang Lab||80||1,633,297,000 |- | 100312||HL045||S1||AL-exome-hFib 17-Eggan-Mar9||Zhang Lab||80||1,506,856,000 |- | 100312||HL045||S2||HMS-GC-Exome-PGP2||Zhang Lab||80||2,253,160,000 |- | 100312||HL045||S3||HMS-GC-Exome-PGP7-Feb24||Zhang Lab||80||2,238,526,000 |- | 100312||HL045||S4||HMS-GC-Exome-PGP9-Feb24||Zhang Lab||80||2,184,078,000 |- | 100312||HL045||S5||AL-exome-hFib 11-Eggan-Mar9||Zhang Lab||80||1,494,615,000 |- | 100312||HL045||S6||AL-exome-ips 11b-Eggan-Mar9 ||Zhang Lab||80||1,517,718,000 |- | 100312||HL045||S7||AL-exome-ips 17a-Eggan-Mar9||Zhang Lab||80||1,898,132,000 |- | 100312||HL045||S8||AL-exome-ips 17b-Eggan-Mar9||Zhang Lab||80||1,484,276,000 |- | 100309||HL044||S1||JD-CPG97K-BC_11306A18-Feb25-B25||Zhang Lab||60||1,195,725,000 |- | 100309||HL044||S2||JD-CPG97K-BC_11306B09-Feb25-B26||Zhang Lab||60||1,010,595,000 |- | 100309||HL044||S3||JD-CPG97K-BC_13066A17-Feb25-B27||Zhang Lab||60||1,282,911,000 |- | 100309||HL044||S4||AL-Genome-FS_gDNA-Feb8||Zhang Lab||60||299,586,000 |- | 100309||HL044||S5||JD-CPG97K+30K-BC_01373A17-Jan15-B3||Zhang Lab||60||572,821,000 |- | 100309||HL044||S6||AL-Exome-CViB-Feb21-Agilent||Zhang Lab||60||43,405,000 |- | 100309||HL044||S7||AL-DigiQ-CVF_PhiX-Mar3-(Jan29)||Zhang Lab||60||1,123,888,000 |- | 100309||HL044||S8||KZ-DigiQ-FS_6N_PhiX-Mar3-(Jan27)||Zhang Lab||60||490,072,000 |- | 100305||HL043||S1||AL-Genome-FS_gDNA-Feb8||Zhang Lab||60||713,975,000 |- | 100305||HL043||S2||AL-Genome-FS_gDNA-Feb8||Zhang Lab||60||580,915,000 |- | 100305||HL043||S3||AL-DigiQ-CVF_Feb-Mar3 w/ PhiX||Zhang Lab||60||1,226,356,000 |- | 100305||HL043||S4||JD-CPG97K-BC_09351A17-Feb25 -B21||Zhang Lab||60||1,070,585,000 |- | 100305||HL043||S5||JD-CPG97K-BC_09491A17-Feb25-B23||Zhang Lab||60||1,089,308,000 |- | 100305||HL043||S6||JD-CPG97K-BC_09491B09-Feb25-B24||Zhang Lab||60||1,072,970,000 |- | 100305||HL043||S7||AL-Genome-DF_gDNA-Feb8||Zhang Lab||60||1,636,622,000 |- | 100305||HL043||S8||AL-Genome-DF_gDNA-Feb8||Zhang Lab||60||1,558,396,000 |- | ||||||AL-DigiQ-CViB/iF-Jan29|||||| |- | 100302||HL042||S1||KZ-DigiQ-FS_300BP-Jan27||Zhang Lab||60||727,876,000 |- | ||||||PhiX|||||| |- | 100302||HL042||S2||MCG-HS-EJ644-Feb26||Zhang Lab||60||534,189,000 |- | 100302||HL042||S3||AL-Exome-CViB-Feb21-Agilent||Zhang Lab||60||535,218,000 |- | 100302||HL042||S4||JD-cpg97k-Breastcancer_09092B09-Feb25-B16||Zhang Lab||60||688,224,000 |- | 100302||HL042||S5||JD-cpg97k-Breastcancer_09123A17-Feb25-B17||Zhang Lab||60||988,402,000 |- | 100302||HL042||S6||JD-cpg97k-Breastcancer_09123B09-Feb25-B18||Zhang Lab||60||1,305,870,000 |- | 100302||HL042||S7||JD-cpg97k-Breastcancer_09206B09-Feb25-B19||Zhang Lab||60||1,139,776,000 |- | 100302||HL042||S8||JD-cpg97k-Breastcancer_09265B09-Feb25-B20||Zhang Lab||60||1,194,327,000 |- | 100226||HL041||S1||JD-CPG97K-BreastCancer-05359A17_R-Feb17-B11R||Zhang Lab||60||1,493,888,000 |- | ||||||AL-DigiQ-CViB/iF-Jan29|||||| |- | 100226||HL041||S2||KZ-DigiQ-FS_300BP-Jan27||Zhang Lab||60||403,356,000 |- | ||||||PhiX|||||| |- | 100226||HL041||S3||HMS-GC-Exome-PGP7-Feb24||Zhang Lab||60||1,646,149,000 |- | 100226||HL041||S4||HMS-GC-Exome-PGP9-Feb24||Zhang Lab||60||1,439,205,000 |- | 100226||HL041||S5||JD-CPG97K-BreastCancer-05359B09_R-Feb17-B12R||Zhang Lab||60||1,453,021,000 |- | 100226||HL041||S6||JD-CPG97K-BreastCancer_07292A17_R-Feb17-B13R||Zhang Lab||60||1,678,189,000 |- | 100226||HL041||S7||JD-CPG97K-BreastCancer_07292B09_R-Feb17-B14R||Zhang Lab||60||1,463,761,000 |- | ||||||AL-DigiQ-CVF-Jan29|||||| |- | 100226||HL041||S8||KZ-DigiQ-FS_6N-Jan27||Zhang Lab||60||1,575,744,000 |- | ||||||PhiX|||||| |- | 100219||HL040||S1||UCSD-BO-YC_RNA-Feb17||Zhang Lab||60||1,357,018,000 |- | ||||||AL-DigiQ-CViB/iF-Jan29|||||| |- | 100219||HL040||S2||KZ-DigiQ-FS_300BP-Jan27||Zhang Lab||60||980,963,000 |- | ||||||PhiX|||||| |- | 100219||HL040||S3||JD-CPG97k+30k-Breast_cancer_01373A17-Jan15-B3||Zhang Lab||60||86,039,000 |- | 100219||HL040||S4||JD-CPG97k+30k-Breast_cancer_01373B09-Jan15-B4||Zhang Lab||60||870,182,000 |- | 100219||HL040||S5||JD-CPG97K-BreastCancer-09075B09-Feb17-15E||Zhang Lab||60||757,280,000 |- | 100219||HL040||S6||JD-CPG97K-BreastCancer-09075B09-Feb17-15R||Zhang Lab||60||1,046,148,000 |- | 100219||HL040||S7||AL-DigiQ-CVF-Feb17 w/ PhiX||Zhang Lab||60||993,905,000 |- | ||||||AL-DigiQ-CVF-Jan29|||||| |- | 100219||HL040||S8||KZ-DigiQ-FS_6N-Jan27||Zhang Lab||60||0 |- | ||||||PhiX|||||| |- | 100212||HL039||S1||JD-CPGmm9A-CtmESC-Feb10||Zhang Lab||60||736,934,000 |- | ||||||AL-DigiQ-CViB/iF-Jan29|||||| |- | 100212||HL039||S2||KZ-DigiQ-FS_300BP-Jan27||Zhang Lab||60||0 |- | ||||||PhiX|||||| |- | 100212||HL039||S3||HMS-GC-exome-Nim-GT||Zhang Lab||60||833,000 |- | 100212||HL039||S4||HMS-GC-Exome-PGP4||Zhang Lab||60||734,357,000 |- | 100212||HL039||S5||JD-CPG97K-Breastcancer_03170B09-Jan28-B7||Zhang Lab||60||1,238,744,000 |- | 100212||HL039||S6|| JD-CPG97K-Breast_Cancer_03259B09-Jan28-B8||Zhang Lab||60||1,103,439,000 |- | 100212||HL039||S7||AL-Exome-CViB-AB_Jan28||Zhang Lab||60||0 |- | 100212||HL039||S8||JD-CPGmm9A-TETmESC-Feb10||Zhang Lab||60||1,348,896,000 |- | |} {| {{table}} | align="center" style="background:#f0f0f0;"|'''Date''' | align="center" style="background:#f0f0f0;"|'''Probe Set''' | align="center" style="background:#f0f0f0;"|'''Tube Label''' | align="center" style="background:#f0f0f0;"|'''Conc. X vol''' | align="center" style="background:#f0f0f0;"|'''Seq facility''' | align="center" style="background:#f0f0f0;"|'''Lib. Const.''' | align="center" style="background:#f0f0f0;"|'''Read Length''' | align="center" style="background:#f0f0f0;"|'''# filtered reads''' | align="center" style="background:#f0f0f0;"|'''# mappable reads''' |- | | Feb 7||HL038||Exome||s1,AL-Exome-CViB-AB-Jan28|| -||Zhang Lab||Alice||60bp||2,631,195 |- | Feb 7||HL038||BSPP||s2,JD-cpg97k-Breastcancer_sample_01373B09-Jan28|| -||Zhang Lab||Jie||60bp||28,592,257||73% |- | Feb 7||HL038||BSPP||s3,JD-cpg97k-Breastcancer_sample_01436B09_Jan28|| -||Zhang Lab||Jie||60bp||28,611,301||72% |- | Feb 7||HL038||Exome||s4,KZ-Exome-CViB-N2-Jan28|| -||Zhang Lab||Kun||60bp||22,996,517 |- | Feb 7||HL038||BSPP||s5,JD-cpg97k-Harvard_sample_M0013.1-Jan28|| -||Zhang Lab||Jie||60bp||27,703,912 |- | Feb 7||HL038||BSPP||s6,JD-cpg97k-Harvard_sample_M0077.3-Jan28|| -||Zhang Lab||Jie||60bp||28,515,530 |- | Feb 7||HL038||BSPP||s7,JD-cpg97k-Harvard_sample_M0124.3-Jan28||-||Zhang Lab||Jie||60bp||27,796,744 |- | Feb 7||HL038||BSPP||s8,JD-cpg97k-Harvard_sample_M0188.3-Jan28|| -||Zhang Lab||Jie||60bp||26,285,658 |- | Feb 2||HL037||BSPP||s1,JD-B3|| -||Zhang Lab||Alice||60bp||329192 |- | Feb 2||HL037||DigiQ||s2,AL-DigiQ-CVF-Jan29/KZ-DigiQ-FS_6N-Jan27|| -||Zhang Lab||Jie||60bp||396995 |- | Feb 2||HL037||Exome||s3,AL-Exome-DF-Jan26-Nimblegen|| -||Zhang Lab||Alice||60bp||24111229||86% |- | Feb 2||HL037||BSPP||s4,KZ-BSPP-B2-N2-Jan28|| -||Zhang Lab||Kun||60bp||24816617||22%/60%(hg18) |- | Feb 2||HL037||Exome||s5,AL-Exome-CViB-AB-Jan28|| -||Zhang Lab||Alice||60bp||2627559||86% |- | Feb 2||HL037||Exome||s6,AL-Exome-CViB-CDE-Jan28|| -||Zhang Lab||Alice||60bp||26225044||78% |- | Feb 2||HL037||DigiQ||s7, AL-DigiQ-CViB-iF-Jan29/KZ-DigiQ-FS_300P-Jan27||-||Zhang Lab||Alice||60bp||461181 |- | Feb 2||HL037||Exome||s8,AL-Exome-FS-Jan26-Nimblegen|| -||Zhang Lab||Alice||60bp||20920646||90% |- | Jan 27||HL036||Exome||s1,AL-Exome-DF-Jan26-Nimblegen|| -||Zhang Lab||Alice||60bp||29,983,562||86.81% |- | Jan 27||HL036||DigiQ||s2,AL-DigiQ-CViB/iF-Jan26|| -||Zhang Lab||Alice||60bp||884920 |- | Jan 27||HL036||BSPP||s3,JD-CPG97K-Harvard_Sample_B0134.1-Jan22|| -||Zhang Lab||Jie||60bp||17,618,873||26%/68%(hg18) |- | Jan 27||HL036||Exome||s4,AL-Exome-FS-Jan26-Nimblegen|| -||Zhang Lab||Alice||60bp||30,430,624||89.97% |- | Jan 27||HL036||BSPP||s5,JD-CPG97K-Harvard_Sample_B0107.1-Jan22|| -||Zhang Lab||Jie||60bp||13,332,549||34%/70%(hg18) |- | Jan 27||HL036||BSPP||s6,JD-CPG97K-Harvard_Sample_B0108.1-Jan22|| -||Zhang Lab||Jie||60bp||15,408,196||36%/72%(hg18) |- | Jan 27||HL036||DigiQ||s7, AL-DigiQ-CVF-Jan26||-||Zhang Lab||Alice||60bp||failed |- | Jan 27||HL036||BSPP||s8,JD-CPG97k+30k-Breast_Cancer_01192B09-Jan15|| -||Zhang Lab||Jie||60bp||17,643,295||14.5%/62%(hg18) |- | Jan 23||HL035||Exome||s2,HMS-GC-Exome-PGP2|| -||Zhang Lab||Alice||60bp||28,245,781 |- | Jan 23||HL035||Exome||s3,HMS-GC-Exome-PGP3|| -||Zhang Lab||Alice||60bp||27,995,793 |- | Jan 23||HL035||Exome||s4,HMS-GC-Exome-PGP3|| -||Zhang Lab||Alice||60bp||23,101,612 |- | Jan 23||HL035||BSPP||s5,JD-CPG97K-HarvardB0047.1-Jan22|| -||Zhang Lab||Jie||60bp||10,279,091||17% |- | Jan 23||HL035||BSPP||s6,JD-CPG97K+30K-HarvardB0060.1-Jan22|| -||Zhang Lab||Jie||60bp||12,433,511||31% |- | Jan 23||HL035||BSPP||s7,JD-CPG97K-HarvardB0070.1-Jan22||-||Zhang Lab||Jie||60bp||14,238,777||36% |- | Jan 23||HL035||Exome||s8,AL-Exome-PGP7-Jan18|| -||Zhang Lab||Alice||60bp||7,225,106 |- | Jan 13||HL034||Exome||s1,HMS-GC-Exome-PGP5-Oct09|| -||Zhang Lab||Billy/Luhan||60bp||15,630,851 |- | Jan 13||HL034||DigiQ||s2,HMS-GC-Exome-PGP5-Oct09|| -||Zhang Lab||Billy/Luhan||60bp||16,208,687 |- | Jan 13||HL034||Exome||s3,AL-Exome-CViB-Jan14-AB|| -||Zhang Lab||Alice||60bp||15,754,533 |- | Jan 13||HL034||Ctrl||s4,AL-Exome-CViB-Jan14-AB|| -||Zhang Lab||Alice||60bp||15,864,921 |- | Jan 13||HL034||Exome||s5,AL-Exome-CViB-Jan14-CDE|| -||Zhang Lab||Alice||60bp||15,761,086 |- | Jan 13||HL034||Exome||s6,AL-Exome-CViB-Jan14-CDE|| -||Zhang Lab||Alice||60bp||15,795,450 |- | Jan 13||HL034||BSPP||s7,JD-cpg97k+30k-BC-01230B09-Jan15||-||Zhang Lab||Jie||60bp||12,246,857||26% |- | Jan 13||HL034||Exome||s8,HMS-GC-exome-Nim-GT|| -||Zhang Lab||Billy/Luhan||60bp||7,671,888 |- | Jan 13||HL033||Exome||s1,HMS-GC-exome-Nim-GT|| -||Zhang Lab||Billy/Luhan||60bp||9,619,807 |- | Jan 13||HL033||DigiQ||s2,KZ-DigiQ-DF-Jan11/AL-DigiQ-CVF-Jan12|| -||Zhang Lab||Alice/Kun||60bp||5,020,038 |- | Jan 13||HL033||BisExSeq||s3,HL-BisExon-NA20431|| -||Zhang Lab||Alan||60bp||11,363,087||75% |- | Jan 13||HL033||Ctrl||s4,PhiX|| -||Zhang Lab||Illumina||60bp||4,589,847 |- | Jan 13||HL033||Exome||s5,AL-Exome-CViB-Jan12-AB|| -||Zhang Lab||Alice||60bp||1,647,688(overloaded) |- | Jan 13||HL033||Exome||s6,AL-Exome-CViB-Jan12-CDE|| -||Zhang Lab||Alice||60bp||13,489(overloaded) |- | Jan 13||HL033||DigiQ||s7, KZ-DigiQ-FS-Jan11/AL-DigiQ-CViB-Jan12|| -||Zhang Lab||Alice/Kun||60bp||5,903,015 |- | Jan 13||HL033||Exome||s8, AL-Exome-CViB-Jan12-AB|| -||Zhang Lab||Kun||60bp||978,032(overloaded) |- | Jan 05||HL032||DigiQ||s1,AL-DigiQ-CVF-Dec23|| -||Zhang Lab||Alice||60bp||14,950,591 |- | Jan 05||HL032||DigiQ||s2,AL-DigiQ-CViB-Dec23|| -||Zhang Lab||Alice||60bp||14,520,807 |- | Jan 05||HL032||DigiQ||s3,KZ-DigiQ-DF-Jan04|| -||Zhang Lab||Kun||60bp||10,753,395 |- | Jan 05||HL032||Ctrl||s4,PhiX|| -||Zhang Lab||Illumina||60bp||25,057(bad DNA) |- | Jan 05||HL032||RRS||s5,KZ-RRS-CVF1-Nov27|| -||Zhang Lab||Kun||60bp||8,295,917 |- | Jan 05||HL032||RRS||s6,KZ-RRS-CViF1-Nov27|| -||Zhang Lab||Kun||60bp||8,810,014 |- | Jan 05||HL032||DigiQ||s7, KZ-DigiQ-FS-Jan04|| -||Zhang Lab||Kun||60bp||10,177,605 |- | Jan 05||HL032||Exome||s8,HMS-GC-PGP8A-Nov1|| -||Zhang Lab||Billy/Luhan||60bp||13,216,056 |} ==2009== ===Jul-Dec=== {| {{table}} | align="center" style="background:#f0f0f0;"|'''Month''' | align="center" style="background:#f0f0f0;"|'''Date''' | align="center" style="background:#f0f0f0;"|'''Probe Set''' | align="center" style="background:#f0f0f0;"|'''Tube label''' | align="center" style="background:#f0f0f0;"|'''Conc. x vol.''' | align="center" style="background:#f0f0f0;"|'''Seq facility''' | align="center" style="background:#f0f0f0;"|'''Lib. Const.''' | align="center" style="background:#f0f0f0;"|'''Read length''' | align="center" style="background:#f0f0f0;"|'''# filtered reads''' | align="center" style="background:#f0f0f0;"|'''# mappable reads''' |- | Dec 29||HL030||Exome||s1,PGP9|| -||Zhang Lab||Billy/Luhan||60bp||14,705,217 |- | Dec 29||HL030||Exome||s2,PGP9|| -||Zhang Lab||Billy/Luhan||60bp||14,950,591 |- | Dec 29||HL030||Exome||s3,PGP9|| -||Zhang Lab||Billy/Luhan||60bp||14,832,179 |- | Dec 29||HL030||Exome||s4,NA12878|| -||Zhang Lab||Billy/Luhan||60bp||15,414,631 |- | Dec 29||HL030||Exome||s5,NA12878|| -||Zhang Lab||Billy/Luhan||60bp||15,536,069 |- | Dec 29||HL030||Exome||s6,NA12878|| -||Zhang Lab||Billy/Luhan||60bp||15,767,169 |- | Dec 29||HL030||Hap||s7, HC-MDA-hCell-Dec17-sam006|| -||Zhang Lab||[[Sam:LabNotes/Human/2009-12-17|Sam(12/17/09)]]||60bp||15,094,541 |- | Dec 29||HL030||?||s8,TM|| -||Zhang Lab||Palsson||60bp||2,384(Failed) |- | Dec 26||AL008||Hap||s1, HC-MDA-hCell-Dec17-sam003|| -||Zhang Lab||[[Sam:LabNotes/Human/2009-12-17|Sam(12/17/09)]]||60bp||15,826,724 |- | Dec 26||AL008||Hap||s2, HC-MDA-hCell-Dec17-sam004|| -||Zhang Lab||[[Sam:LabNotes/Human/2009-12-17|Sam(12/17/09)]]||60bp||7,814,019 |- | Dec 26||AL008||Hap||s3, HC-MDA-hCell-Dec17-sam005|| -||Zhang Lab||[[Sam:LabNotes/Human/2009-12-17|Sam(12/17/09)]]||60bp||4,516,674 |- | Dec 26||AL008||DigiQuant||s4,PCR-CV-iB(w/PhiX)|| -||Zhang Lab||Alice||60bp||5,625,091 |- | Dec 26||AL008||BSPP||s5,B2-175bp|| -||Zhang Lab||Ida||60bp||2,629,431||22% |- | Dec 26||AL008||BSPP||s6,B2-200bp|| -||Zhang Lab||Ida||60bp||3,834,872||21% |- | Dec 26||AL008||BSPP||s7,H2-175bp|| -||Zhang Lab||Ida||60bp||8,081,341||26% |- | Dec 26||AL008||BSPP||s8,H2-200bp|| -||Zhang Lab||Ida||60bp||10,992,765||30% |- | Dec 22||AL007||DigiQuant||s2,PCR-CV-hiPS-F|| -||Zhang Lab||Alice||60bp||0(overloaded) |- | Dec 22||AL007||Exome||s3,CV-iB-ACE|| -||Zhang Lab||Kun||60bp||1,235,398 |- | Dec 22||AL007||Exome||s4,CV-iB-BD|| -||Zhang Lab||Kun||60bp||642,138 |- | Dec 22||AL007||BSPP||s5,Har1|| -||Zhang Lab||Ida||60bp||6,610,330||12% |- | Dec 22||AL007||BSPP||s6,Har2|| -||Zhang Lab||Ida||60bp||5,347,364||20% |- | Dec 22||AL007||BSPP||s7,Har3|| -||Zhang Lab||Ida||60bp||15,243,209||26% |- | Dec 22||AL007||BSPP||s8,Har4|| -||Zhang Lab||Ida||60bp||14,904,014||24% |- | Dec 18||AL006||DigiQuant||s2,PCR-CV-hiPS-F(w/phiX)|| -||Zhang Lab||Alice||60bp||18,527,480 |- | Dec 18||AL006||RRS||s3,DpnII-CV-Fibroblast1|| -||Zhang Lab||Kun||60bp||9,278,480 |- | Dec 18||AL006||RRS||s4,DpnII-CV-hiPS-F|| -||Zhang Lab||Kun||60bp||7,530,675 |- | Dec 18||AL006||Exome||s5,PGP8C|| -||Zhang Lab||Billy/Luhan||60bp||11,320,511 |- | Dec 18||AL006||Exome||s6,PGP9|| -||Zhang Lab||Billy/Luhan||60bp||7,466,479 |- | Dec 18||AL006||BSPP||s7,Har9|| -||Zhang Lab||Jie||60bp||16,529,111||28% |- | Dec 18||AL006||BSPP||s8,Har10|| -||Zhang Lab||Jie||60bp||15,507,608||11% |- | Dec 09||HL029||Exome||s1,PGP4, #8-9|| -||Zhang Lab||Billy/Luhan||60bp||11,299,862 |- | Dec 09||HL029||Exome||s2,PGP6, #8-9|| -||Zhang Lab||Billy/Luhan||60bp||10,572,824 |- | Dec 09||HL029||Exome||s3,PGP9|| -||Zhang Lab||Billy/Luhan||60bp||9,577,578 |- | Dec 09||HL029||Exome||s4,PGP10,#8-9|| -||Zhang Lab||Billy/Luhan||60bp||13,012,173 |- | Dec 09||HL029||Exome||s5,CV-hiPS-B|| -||Zhang Lab||Alan||60bp||16,316,464 |- | Dec 09||HL029||Exome||s6,CV-hiPS-B|| -||Zhang Lab||Alan||60bp||17,365,795 |- | Dec 09||HL029||Exome||s7,CV-hiPS-B|| -||Zhang Lab||Alan||60bp||16,012,994 |- | Dec 09||HL029||Exome||s8,CV-hiPS-B|| -||Zhang Lab||Alan||60bp||1,602,572 |- | Dec 06||HL028||RRS||s1,Dpn-CV-F2|| -||Zhang Lab||Kun||60bp||7,073,505 |- | Dec 06||HL028||RRS||s2,Dpn-CV-F2|| -||Zhang Lab||Kun||60bp||7,060,114 |- | Dec 06||HL028||RRS||s3,Dpn-CV-iF2|| -||Zhang Lab||Kun||60bp||6,001,805 |- | Dec 06||HL028||RRS||s4,Dpn-CV-iF2|| -||Zhang Lab||Kun||60bp||3,264,795 |- | Dec 06||HL028||Exome||s5,CV-iB (A,C)|| -||Zhang Lab||Billy/Luhan||60bp||7,511,894 |- | Dec 06||HL028||Exome||s6,PGP8D|| -||Zhang Lab||Billy/Luhan||60bp||9,310,623 |- | Dec 06||HL028||Exome||s7,PGP8E|| -||Zhang Lab||Billy/Luhan||60bp||11,224,269 |- | Dec 06||HL028||Exome||s8,PGP8|| -||Zhang Lab||Billy/Luhan||60bp||5,999,123 |- | Dec 02||HL027||RRS||s1,Dpn-CV-iB1|| -||Zhang Lab||Kun||60bp||10,747,192 |- | Dec 02||HL027||RRS||s2,Dpn-CV-iF1|| -||Zhang Lab||Kun||60bp||9,030,411 |- | Dec 02||HL027||RRS||s3,Dpn-CV-F1|| -||Zhang Lab||Kun||60bp||9,935,148 |- | Dec 02||HL027||RRS||s4,CV-iB (A,C)|| -||Zhang Lab||Alan||60bp||13,456,232 |- | Dec 02||HL027||Exome||s5,CV-iB (A,C)|| -||Zhang Lab||Alan||60bp||13,137,026 |- | Dec 02||HL027||Exome||s6,CV-iB (B,D,E)|| -||Zhang Lab||Alan||60bp||16,102,120 |- | Dec 02||HL027||Exome||s7,CV-iB (B,D,E)|| -||Zhang Lab||Alan||60bp||15,933,168 |- | Dec 02||HL027||Exome||s8,PGP8a|| -||Zhang Lab||Billy/Luhan||60bp||11,956,198 |- | Nov 27||HL026||Exome||s1,CV-fibroblast (Alice)|| -||Zhang Lab||Alan||60bp||17,121,798 |- | Nov 27||HL026||Exome||s2,CVF-N(Covaris)|| -||Zhang Lab||Alan||60bp||12,577,956 |- | Nov 27||HL026||Exome||s3,CVF-N(Covaris)|| -||Zhang Lab||Alan||60bp||11,767,869 |- | Nov 27||HL026||Exome||s4,CVF-N(Covaris)|| -||Zhang Lab||Alan||60bp||12,212,818 |- | Nov 27||HL026||Exome||s5,CV-iPS (#1-7)|| -||Zhang Lab||Alan||60bp||18,413,190 |- | Nov 27||HL026||Exome||s6,DF6(#1-7)|| -||Zhang Lab||Alan||60bp||18,035,161 |- | Nov 27||HL026||Exome||s7,Foreskin(#1-7)|| -||Zhang Lab||Alan||60bp||17,939,296 |- | Nov 27||HL026||Exome||s8,CVF-N(USER/S1, A/B)|| -||Zhang Lab||Alan||60bp||9,364,209 |- | Nov 27||HL025||Exome||s1,PGP3 #8-9|| -||Zhang Lab||Alan||60bp||9,106,173 |- | Nov 27||HL025||Exome||s2,PGP5 #8-9|| -||Zhang Lab||Alan||60bp||10,174,527 |- | Nov 23||HL025||Exome||s3,PGP7 #8-9|| -||Zhang Lab||Alan||60bp||16,653,644 |- | Nov 23||HL025||Exome||s4,CpgSeq Harvard #2|| -||Zhang Lab||Jie||60bp||failed |- | Nov 23||HL025||Exome||s5,CpgSeq Harvard #5|| -||Zhang Lab||Jie||60bp||12914061 |- | Nov 23||HL025||Exome||s6,CV-fibroblast #1-7 (Alice)|| -||Zhang Lab||Alan||60bp||17,745,112 |- | Nov 23||HL025||Exome||s7,CV-iPS #1-7 (Alice)|| -||Zhang Lab||Alan||60bp||18,466,358 |- | Nov 23||HL025||Exome||s8,CV-fibroblast New (#6-7)|| -||Zhang Lab||Alan||60bp||10,392,332 |- | Nov 19||HL024||Exome||s1,PGP1L, set 1-7|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||16,060,639 |- | Nov 19||HL024||Exome||s2,PGP1L, set 1-7|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||16,406,685 |- | Nov 19||HL024||Exome||s3,PGP1L, set 8|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||13,861,016 |- | Nov 19||HL024||Exome||s4,PGP1L, set 9|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||12,455,546 |- | Nov 19||HL024||Hap||s5,N12|| -||Zhang Lab||[[Sam:LabNotes/Human/2009-10-29|Sam]]||60bp||11,320,511 |- | Nov 19||HL024||Exome||s6,PGP8B|| -||Zhang Lab||Billy/Luhan||60bp||7,466,479 |- | Nov 19||HL024||BCM||s7,P1 (Baylor)|| -||Zhang Lab||Baylor||60bp||4,934,597 |- | Nov 19||HL024||BCM||s8,P4 (Baylor)|| -||Zhang Lab||Baylor||60bp||1,602,572 |- | Nov 13||HL023||Exome||s1,PGP1-iPS, set 1-7|| -||Zhang Lab||[[AlanFung:LabNotes/Sequencing/2009-11-5|Alan(11/05)]]||60bp||12,404,414 |- | Nov 13||HL023||Exome||s2,PGP1-iPS, set 1-7|| -||Zhang Lab||[[AlanFung:LabNotes/Sequencing/2009-11-5|Alan(11/05)]]||60bp||13,314,169 |- | Nov 13||HL023||Exome||s3,PGP1-iPS, set 8|| -||Zhang Lab||[[AlanFung:LabNotes/Sequencing/2009-11-5|Alan(11/05)]]||60bp||16,787,057 |- | Nov 13||HL023||Exome||s4,PGP1-iPS, set 9|| -||Zhang Lab||[[AlanFung:LabNotes/Sequencing/2009-11-5|Alan(11/05)]]||60bp||15,362,879 |- | Nov 13||HL023||Exome||s5,DF6-9-9, set 8|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||16,614,857 |- | Nov 13||HL023||Exome||s6,DF6-9-9, set 9|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||16,897,414 |- | Nov 13||HL023||Exome||s7,Foreskin, set 8|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||16,023,565 |- | Nov 13||HL023||Exome||s8,Foreskin, set 9|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||10,656,758 |- | Nov 09||HL022||Exome||s1,DF6-9-9, set 1-7|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||12,652,000 |- | Nov 09||HL022||Exome||s2,DF6-9-9, set 1-7|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||11,579,830 |- | Nov 09||HL022||Exome||s3,Foreskin, set 1-7|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||9,624,602 |- | Nov 09||HL022||Exome||s4,Foreskin, set 1-7|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||8,249,755 |- | Nov 09||HL022||Exome||s5,CV-iPS (new), set 1-7|| -||Zhang Lab||[[AlanFung:LabNotes/Sequencing/2009-11-5|Alan(11/05)]]||60bp||10,237,538 |- | Nov 09||HL022||Exome||s6,CV-iPS (new), set 1-7|| -||Zhang Lab||[[AlanFung:LabNotes/Sequencing/2009-11-5|Alan(11/05)]]||60bp||10,621,342 |- | Nov 09||HL022||Exome||s7,CV-iPS (new), set 1-7|| -||Zhang Lab||[[AlanFung:LabNotes/Sequencing/2009-11-5|Alan(11/05)]]||60bp||14,439,349 |- | Nov 09||HL022||Exome||s8, ChrWGA-N10|| -||Zhang Lab||[[Sam:LabNotes/Human/2009-10-29|Sam]]||60bp||8,624,207 |- | Oct 29||HL020||Exome||s1,CV-iPS, set 8|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||15,416,990 |- | Oct 29||HL020||Exome||s2,CV-iPS, set 9|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||17,569,551 |- | Oct 29||HL020||Exome||s3,CV-fibroblast, set 8|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||16,895,701 |- | Oct 29||HL020||Exome||s4,CV-fibroblast, set 9|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||15,502,227 |- | Oct 29||HL020||Exome||s5,NA12878, set 8|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||16,231,983 |- | Oct 29||HL020||Exome||s6,NA12878, set 8|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||17,231,313 |- | Oct 29||HL020||Exome||s7,NA12878, set 9|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||16,903,121 |- | Oct 29||HL020||Exome||s8,NA12878, set 9|| -||Zhang Lab||[[Alice:LabNotes/2009-10-28|Alice(10/28)]]||60bp||13,743,218 |- | Oct 26||HL019||CTM||s1,PGP1L-CTM1(HpaII)|| -||Zhang Lab||Zymo||40bp|| |- | Oct 26||HL019||CTM||s2,PGP1L-CTM2(MspI)|| -||Zhang Lab||Zymo||40bp|| |- | Oct 26||HL019||CTM||s3,PGP1L-CTM3(4-RE)|| -||Zhang Lab||Zymo||40bp|| |- | Oct 26||HL019||Exome||s4,PGP4|| -||Zhang Lab||Billy||40bp|| |- | Oct 26||HL019||Exome||s5,PGP4|| -||Zhang Lab||Billy||40bp|| |- | Oct 26||HL019||Exome||s6,PGP6|| -||Zhang Lab||Billy||40bp|| |- | Oct 26||HL019||Exome||s7,PGP6|| -||Zhang Lab||Billy||40bp|| |- | Oct 26||HL019||Exome||s8,PGP10|| -||Zhang Lab||Billy||40bp|| |- | Oct 23||HL018||Exome||s1,PGP1-iPS|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||14,503,245 |- | Oct 23||HL018||Exome||s2,PGP1-iPS|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||14,834,731 |- | Oct 23||HL018||Exome||s3,NA12878_EL_140.2|| -||Zhang Lab||[[Kun:LabNotes/ExonomeSeq/2009-10-16|Kun]]||40bp||16,130,004 |- | Oct 23||HL018||Exome||s4,NA12878_EL_140.2|| -||Zhang Lab||[[Kun:LabNotes/ExonomeSeq/2009-10-16|Kun]]||40bp||16,868,359 |- | Oct 23||HL018||Exome||s5,NA12878_EL_140.2|| -||Zhang Lab||[[Kun:LabNotes/ExonomeSeq/2009-10-16|Kun]]||40bp||18,464,088 |- | Oct 23||HL018||Exome||s6,NA12878_EL_140.2|| -||Zhang Lab||[[Kun:LabNotes/ExonomeSeq/2009-10-16|Kun]]||40bp||18,744,329 |- | Oct 23||HL018||Exome||s7,CV-iPS|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||17,369,523 |- | Oct 23||HL018||Exome||s8,CV-Fibroblast|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||15,991,415 |- | Oct 20||HL017||Exome||s1,PGP1-iPS|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||16,124,303 |- | Oct 20||HL017||Exome||s2,DF6-9-9|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||18,701,054 |- | Oct 20||HL017||Exome||s3,Foreskin|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||17,660,876 |- | Oct 20||HL017||Exome||s4,CV-iPS|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||17,798,921 |- | Oct 20||HL017||Exome||s5,CV-iPS|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||18,054,888 |- | Oct 20||HL017||Exome||s6,CV-fibroblast|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||18,120,291 |- | Oct 20||HL017||Exome||s7,NA12878_EL_140.2|| -||Zhang Lab||[[Kun:LabNotes/ExonomeSeq/2009-10-16|Kun]]||40bp||17,106,926 |- | Oct 20||HL017||Exome||s8,NA12878_EL_140.3|| -||Zhang Lab||[[Kun:LabNotes/ExonomeSeq/2009-10-16|Kun]]||40bp|||17,261,477 |- | Oct 18||HL016||Exome||s1,CV-fibroblast|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||15,670,145 |- | Oct 18||HL016||Exome||s2,CV-fibroblast|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||15,907,544 |- | Oct 18||HL016||Exome||s3,CV-iPS|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||15,818,281 |- | Oct 18||HL016||Exome||s4,CV-iPS|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||16,080,730 |- | Oct 18||HL016||Exome||s5,DF6|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||16,231,745 |- | Oct 18||HL016||Exome||s6,DF6|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||16,377,593 |- | Oct 18||HL016||Exome||s7,Foreskin|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||15,732,166 |- | Oct 18||HL016||Exome||s8,Foreskin|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp|||15,019,512 |- | Oct 15||HL015||Exome||s1,PGP8|| -||Zhang Lab||Billy||40bp||13,429,437 |- | Oct 15||HL015||Exome||s2,PGP8|| -||Zhang Lab||Billy||40bp||13,978,474 |- | Oct 15||HL015||Exome||s3,PGP8|| -||Zhang Lab||Billy||40bp||13,935,910 |- | Oct 15||HL015||Exome||s4,PGP9|| -||Zhang Lab||Billy||40bp||13,692,249 |- | Oct 15||HL015||Exome||s5,PGP9|| -||Zhang Lab||Billy||40bp||12,912,972 |- | Oct 15||HL015||Exome||s6,PGP9|| -||Zhang Lab||Billy||40bp||12,823,767 |- | Oct 15||HL015||Exome||s7,NA12878|| -||Zhang Lab||Billy||40bp||16,883,674 |- | Oct 15||HL015||Exome||s8,NA12878|| -||Zhang Lab||Billy||40bp|||15,379,183 |- | Oct 12||HL014||Exome||s1,DF6-9-9|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||8,305,141 |- | Oct 12||HL014||Exome||s2,foreskin|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||8,488,946 |- | Oct 12||HL014||Exome||s3,PGP1-ips|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||5,966,433 |- | Oct 12||HL014||Exome||s4,CV-ips|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||4,351,085 |- | Oct 12||HL014||Exome||s5,CV-fibroblast|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||3,621,861 |- | Oct 12||HL014||Exome||s6,PGP7|| -||Zhang Lab||[[Alice:LabNotes/2009-10-9|Alice(10/09)]]||40bp||11,805,391 |- | Oct 12||HL014||Exome||s7,PGP8|| -||Zhang Lab||Billy||40bp||14,330,453 |- | Oct 12||HL014||Exome||s8,PGP9|| -||Zhang Lab||Billy||40bp||12,477,329 |- | Oct 08||HL013||Exome||s1,PGP1|| -||Zhang Lab||Billy||40bp||14872773 |- | Oct 08||HL013||Exome||s2,PGP2|| -||Zhang Lab||Billy||40bp||13777534 |- | Oct 08||HL013||Exome||s3,PGP3|| -||Zhang Lab||Billy||40bp||10536677 |- | Oct 08||HL013||Exome||s4,PGP5|| -||Zhang Lab||Billy||40bp||8445974 |- | Oct 08||HL013||BSPP-30k||s5,DF6-9-9-cpg30k|| -||Zhang Lab||Ida||40bp||9684020 |- | Oct 08||HL013||BSPP-30k||s6,Foreskin|| -||Zhang Lab||Ida||40bp||13740681 |- | Oct 08||HL013||USC-Hsieh||s7,USC,MH010B xMboI|| -||Zhang Lab||Kyle||40bp||18388915 |- | Oct 08||HL013||USC-Hsieh||s8,USC,TCF #3|| -||Zhang Lab||Kyle||40bp||14866071 |- | Oct 05||HL011||Exome||s1,PGP8|| -||Zhang Lab||Billy||40bp|| |- | Oct 05||HL011||Exome||s2,PGP8|| -||Zhang Lab||Billy||40bp|| |- | Oct 05||HL011||Exome||s3,PGP9|| -||Zhang Lab||Billy||40bp|| |- | Oct 05||HL011||Exome||s4,PGP9|| -||Zhang Lab||Billy||40bp|| |- | Oct 05||HL011||Exome||s5,NA12878|| -||Zhang Lab||Billy||40bp|| |- | Oct 05||HL011||Exome||s6,NA12878|| -||Zhang Lab||Billy||40bp|| |- | Oct 05||HL011||USC-Hsieh||s7,USC,MH010B xMboI|| -||Zhang Lab||Kyle||40bp|| |- | Oct 05||HL011||USC-Hsieh||s8,USC,TCF #3|| -||Zhang Lab||Kyle||40bp|| |- | Oct 01||HL012||Exome||s1,CV-ips (unsheared)|| -||Zhang Lab||[[Alice:LabNotes/2009-9-28|Alice&Ida]]||80bp||16,072,089 |- | Oct 01||HL012||Exome||s2,CV-Fibr(unsheared)|| -||Zhang Lab||[[Jie:LabNotes/CpgSeq/2009-9-28|Alice&Ida]]||80bp||16,826,803 |- | Oct 01||HL012||Exome||s3,NA21687, Cpg97k|| -||Zhang Lab||[[Jie:LabNotes/CpgSeq/2009-9-22|Ida]]||80bp||8,235,105 |- | Oct 01||HL012||Exome||s4,PhiX|| -||Zhang Lab||Illumina||80bp||14,496,850 |- | Oct 01||HL012||Exome||s5,NA21781|| -||Zhang Lab||[[Jie:LabNotes/CpgSeq/2009-9-22|Ida]]||80bp||0 |- | Oct 01||HL012||Exome||s6,NA21833|| -||Zhang Lab||[[Jie:LabNotes/CpgSeq/2009-9-22|Ida]]||80bp||3,293,913 |- | Oct 01||HL012||Exome||s7,NA21660|| -||Zhang Lab||[[Jie:LabNotes/CpgSeq/2009-9-22|Ida]]||80bp||8,297 |- | Oct 01||HL012||Exome||s8,NA21731|| -||Zhang Lab||[[Jie:LabNotes/CpgSeq/2009-9-22|Ida]]||80bp||11,048,272|| |- | Sept 26||HL010||Exome||s1,CV-ips|| -||Zhang Lab||[[Alice:LabNotes/2009-9-21|Alice(09/21)]]||40bp||17,770,197||13,270,733 |- | Sept 26||HL010||Exome||s2,CV-ips|| -||Zhang Lab||[[Alice:LabNotes/2009-9-21|Alice]]||40bp||17,143,085 |- | Sept 26||HL010||Exome||s3,CV-fibroblast|| -||Zhang Lab||[[Alice:LabNotes/2009-9-21|Alice(09/21)]]||40bp||14,248,797|| |- | Sept 26||HL010||Exome||s4,CV-fibroblast|| -||Zhang Lab||[[Alice:LabNotes/2009-9-21|Alice(09/21)]]||40bp||13,741,749|| |- | Sept 26||HL010||Exome||s5,DF6-9-9|| -||Zhang Lab||[[Alice:LabNotes/2009-9-21|Alice(09/21)]]||40bp||14,210,912 |- | Sept 26||HL010||Exome||s6,foreskin|| -||Zhang Lab||[[Alice:LabNotes/2009-9-21|Alice(09/21)]]||40bp||14,514,230 |- | Sept 26||HL010||Exome||s7,PGP8|| -||Zhang Lab||Billy||40bp||11,980,992|| |- | Sept 26||HL010||Exome||s8,PGP9|| -||Zhang Lab||Billy||40bp||13,292,848|| |- | Sept 23||AL003||Exome||s1,DF6-9-9|| -||Zhang Lab||[[Alice:LabNotes/2009-9-21|Alice(09/21)]]||40bp||16,395,953||13,954,426 |- | Sept 23||AL003||Exome||s2,foreskin|| -||Zhang Lab||[[Alice:LabNotes/2009-9-21|Alice(09/21)]]||40bp||17,323,121||14,344,756 |- | Sept 23||AL003||Exome||s3,PGP1-ips|| -||Zhang Lab||[[Alice:LabNotes/2009-9-21|Alice(09/21)]]||40bp||17,005,060 |- | Sept 23||AL003||Exome||s4,CV-ips|| -||Zhang Lab||[[Alice:LabNotes/2009-9-21|Alice(09/21)]]||40bp||17,848,289||13,344,177 |- | Sept 23||AL003||Exome||s5,CV-fibroblast|| -||Zhang Lab||[[Alice:LabNotes/2009-9-21|Alice(09/21)]]||40bp||18,152,672||15,372,979 |- | Sept 23||AL003||Exome||s6,NA12878-3|| -||Zhang Lab||[[Alice:LabNotes/2009-9-21|Alice(09/21)]]||40bp||18,391,593||14,109,009 |- | Sept 23||AL003||USC-Hsieh||s7,DK4#2|| -||Zhang Lab||Kyle||40bp||13,632,900||11,976,351 |- | Sept 23||AL003||USC-HSieh||s8,TK9|| -||Zhang Lab||Kyle||40bp||16,272,821||15,168,255 |- | Sept 18||AL002||Exome||s1,DF6-9-9|| -||Zhang Lab||[[Alice:LabNotes/2009-9-15|Alice(09/15)]]||40bp||16,173,475 |- | Sept 18||AL002||Exome||s2,foreskin|| -||Zhang Lab||[[Alice:LabNotes/2009-9-15|Alice(09/15)]]||40bp||10,863,012 |- | Sept 18||AL002||Exome||s3,CV-ips|| -||Zhang Lab||[[Alice:LabNotes/2009-9-15|Alice(09/15)]]||40bp||8,306,219 |- | Sept 18||AL002||Exome||s4,CV-fibroblast|| -||Zhang Lab||[[Alice:LabNotes/2009-9-15|Alice(09/15)]]||40bp||3,987,069 |- | Sept 18||AL002||-||s5,PhiX-2nd|| -||Zhang Lab||[[Alice:LabNotes/2009-9-7|Alice]]||40bp||- |- | Sept 18||AL002||USC-Hsieh||s6,MH001 H2 xHeaIII|| -||Zhang Lab||Kyle||40bp||19,490,463||18,566,845 |- | Sept 18||AL002||USC-Hsieh||s7,MH010B xDpnI|| -||Zhang Lab||Kyle||40bp||19,160,830||18,435,611 |- | Sept 18||AL002||USC-Hsieh||s8,Tk4 #2|| -||Zhang Lab||Kyle||40bp||16,343,257||15,039,726 |- | Sept 11||AL001||Exome||s1,DF6-9-9|| -||Zhang Lab||[[Alice:LabNotes/2009-9-1|Alice]]||40bp||5,115,027 |- | Sept 11||AL001||Exome||s2,foreskin|| -||Zhang Lab||[[Alice:LabNotes/2009-9-1|Alice]]||40bp||1,480,281 |- | Sept 11||AL001||-||s3,PhiX-2nd(re-amplified)|| -||Zhang Lab||[[Alice:LabNotes/2009-9-7|Alice]]||40bp||12,640,504 |- | Sept 11||AL001||-||s4,PhiX|| -||Zhang Lab||-||40bp||12,737,950 |- | Sept 11||AL001||BSPP||s5,Na21660-cpg97k|| -||Zhang Lab||[[Jie:LabNotes/CpgSeq/2009-9-8|Jie]]||40bp||1,624,500||15% |- | Sept 11||AL001||BSPP||s6,DFips-cpg30k+97k|| -||Zhang Lab||[[Jie:LabNotes/CpgSeq/2009-5-29|Jie]]||40bp||12,230,825||52% |- | Sept 11||AL001||USC-Hsieh||s7,MH010B x DpnI|| -||Zhang Lab||Kyle||40bp||- |- | Sept 11||AL001||USC-Hsieh||s8,Pol II|| -||Zhang Lab||Kyle||40bp||7,545,937||4,581,330 |- | Sept 07||HL007||Exome||s1,PGP4|| -||Zhang Lab||Billy||36bp||12,221,023||- |- | Sept 07||HL007||Exome||s2,PGP4|| -||Zhang Lab||Billy||36bp||12,462,164||- |- | Sept 07||HL007||Exome||s3,PGP6|| -||Zhang Lab||Billy||36bp||12,781,093||- |- | Sept 07||HL007||Exome||s4,PGP6|| -||Zhang Lab||Billy||36bp||13,207,084||- |- | Sept 07||HL007||Exome||s5,PGP10|| -||Zhang Lab||Billy||36bp||11,853,340||- |- | Sept 07||HL007||Exome||s6,PGP10|| -||Zhang Lab||Billy||36bp||12,091,086||- |- | Sept 07||HL007||BSPP-97k||s7,50192A|| -||Zhang Lab||Jie||36bp||17,131,060||29% |- | Sept 07||HL007||BSPP-97k||s8,50192B|| -||Zhang Lab||Jie||36bp||16,378,655||28% |- | August 29||HL009-3||Exome||s1,DF6-9-9|| 60nM ||Zhang Lab||[[Alice:LabNotes/2009-8-26|Alice]]||40bp||- |- | August 29||HL009-3||Exome||s2,DF6-9-9|| 60nM ||Zhang Lab||[[Alice:LabNotes/2009-8-26|Alice]]||40bp||- |- | August 29||HL009-3||Exome||s3,foreskin|| 45nM ||Zhang Lab||[[Alice:LabNotes/2009-8-26|Alice]]||40bp||- |- | August 29||HL009-3||Exome||s4,foreskin|| 45nM ||Zhang Lab||[[Alice:LabNotes/2009-8-26|Alice]]||40bp||- |- | August 29||HL009-3||Exome||s5,PGP1-ips|| 38nM ||Zhang Lab||[[Alice:LabNotes/2009-8-26|Alice]]||40bp||- |- | August 29||HL009-3||Exome||s6,CV-ips|| 90nM ||Zhang Lab||[[Alice:LabNotes/2009-8-26|Alice]]||40bp||- |- | August 29||HL009-3||Exome||s7,CV-fibroblast|| 76nM ||Zhang Lab||[[Alice:LabNotes/2009-8-26|Alice]]||40bp||- |- | August 29||HL009-3||Exome||s8,PGP1|| 34nM ||Zhang Lab||[[Alice:LabNotes/2009-8-26|Alice]]||40bp||- |- | August 26||HL008||Exome||s1,PGP4|| -||Zhang Lab||Billy||40bp||14295243||- |- | August 26||HL008||Exome||s2,PGP6|| -||Zhang Lab||Billy||40bp||15558898||- |- | August 26||HL008||Exome||s3,PGP10|| -||Zhang Lab||Billy||40bp||15871619||- |- | August 26||HL008||BSPP-97k||s4,50192A|| -||Zhang Lab||[[Jie:LabNotes/CpgSeq/2009-8-7|Jie]]||40bp||10401608||- |- | August 26||HL008||BSPP-97k||s5,50192B|| -||Zhang Lab||[[Jie:LabNotes/CpgSeq/2009-8-7|Jie]]||40bp||9693893||- |- | August 26||HL008||Exome||s6,Foreskin|| -||Zhang Lab||[[Alice:LabNotes/2009-7-28|Alice]]||40bp||14739764||- |- | August 26||HL008||Exome||s7,PGP4(MmeI)|| -||Zhang Lab||Billy||40bp||12106286||- |- | August 26||HL008||Control||s8,PhiX|| -||Zhang Lab||Illumina||40bp||10161944||- |- | August 16||HL006||Exome||s1,DF6-9-9|| -||Zhang Lab||[[Alice:LabNotes/2009-7-28|Alice]]||40bp||5,684,406||- |- | August 16||HL006||Exome||s2,Foreskin|| -||Zhang Lab||[[Alice:LabNotes/2009-7-28|Alice]]||40bp||8,009,671||- |- | August 16||HL006||Exome||s3,Foreskin-lig|| -||Zhang Lab||[[Alice:LabNotes/2009-7-28|Alice]]||40bp||8,369,819||- |- | August 16||HL006||Exome||s4,NA12878|| -||Zhang Lab||[[Alice:LabNotes/2009-7-28|Alice]]||40bp||7,487,512||- |- | August 16||HL006||Exome||s5,NA12878-lig|| -||Zhang Lab||[[Alice:LabNotes/2009-7-28|Alice]]||40bp||8,411,077||- |- | August 16||HL006||Exome||s6,NA12878|| -||Zhang Lab||Billy||40bp||8,556,271||- |- | August 16||HL006||Exome||s7,PGP10|| -||Zhang Lab||Billy||40bp||9,736,297||- |- | August 16||HL006||Control||s8,PhiX|| -||Zhang Lab||Illumina||40bp||6,985,337||- |- | August 13||HL005||Exome||NA12878||-||Zhang lab||Billy||40bp||15,666,228|| |- | August 13||HL005||Exome||NA12878||-||Zhang lab||Billy||40bp||14,091,504|| |- | August 13||HL005||BSPP-97k||Par1||-||Zhang lab||[[Jie:LabNotes/CpgSeq/2009-8-5|Jie Deng]]||40bp||10,385,536||3,005,889||12% |- | August 13||HL005||BSPP-97k||Par9||-||Zhang lab||[[Jie:LabNotes/CpgSeq/2009-8-5|Jie Deng]]||40bp||7,537,771||3,430,524||21% |- | August 13||HL005||USC-Hsieh||MH010B xMboI||-||Zhang lab||Kyle||40bp||6,699,431||6,125,263 |- | August 13||HL005||USC-Hsieh||MH010B xDpnI||-||Zhang lab||Kyle||40bp||2,204,512||2,094,844 |- | August 13||HL005||Exome(end-sequencing)||PGP2S-Phu||54.5nM||Zhang lab||[[Alice:LabNotes/2009-8-6|Alice Li]]||40bp||7,022,465||5,950,793 |- | August 13||HL005||Exome(end-sequencing)||PGP2S-iProof||60.6nM||Zhang lab||[[Alice:LabNotes/2009-8-6|Alice Li]]||40bp||5,798,969||4,756,952 |- | August 09||HL004||Exome||s1,DF6-9-9-lig|| -||Zhang Lab||[[Alice:LabNotes/2009-7-28|Alice]]||40bp||17,147,112||- |- | August 09||HL004||Exome||s2,DF6-9-9-lig|| -||Zhang Lab||[[Alice:LabNotes/2009-7-28|Alice]]||40bp||16,956,048||- |- | August 09||HL004||Exome||s3,Foreskin-lig|| -||Zhang Lab||[[Alice:LabNotes/2009-7-28|Alice]]||40bp||16,802,403||- |- | August 09||HL004||Exome||s4,PGP10|| -||Zhang Lab||Billy||40bp||18,644,730||- |- | August 09||HL004||Exome||s5,PGP4|| -||Zhang Lab||Billy||40bp||18,809,762||- |- | August 09||HL004||Exome||s6,PGP4|| -||Zhang Lab||Billy||40bp||18,970,955||- |- | August 09||HL004||Exome||s7,PGP6|| -||Zhang Lab||Billy||40bp||18,723,412||- |- | August 09||HL004||Exome||s8,PGP6|| -||Zhang Lab||Billy||40bp||19,233,480||- |- | August 05||HL003||Exome||s1,DF6-9-9|| -||Zhang Lab||[[Alice:LabNotes/2009-7-28|Alice]]||40bp||4,417,586||2,288,789 |- | August 05||HL003||Exome||s2,Foreskin|| -||Zhang Lab||[[Alice:LabNotes/2009-7-28|Alice]]||40bp||5,020,353||3,214,546 |- | August 05||HL003||Exome||s3,Foreskin-lig|| -||Zhang Lab||[[Alice:LabNotes/2009-7-28|Alice]]||40bp||6,660,328||3,119,331 |- | August 05||HL003||Exome||s4,NA12878|| -||Zhang Lab||[[Alice:LabNotes/2009-7-28|Alice]]||40bp||3,727,520||1,981,326 |- | August 05||HL003||Exome||s5,NA12878-lig|| -||Zhang Lab||[[Alice:LabNotes/2009-7-28|Alice]]||40bp||6,455,281||3,253,093 |- | August 05||HL003||Exome||s6,NA12878|| -||Zhang Lab||Billy||40bp||14,992,076||8,643,897 |- | August 05||HL003||Exome||s7,PGP10|| -||Zhang Lab||Billy||40bp||19,423,381||11,040,240 |- | August 05||HL003||Control||s8,PhiX|| -||Zhang Lab||Illumina||40bp||20,078,536||19,817,515 |- | July 28||HL002||Exome||s1,PhiX|| -||Zhang Lab||Illumina||40bp||19474917||- |- | July 28||HL002||Exome||s2,Hues 6 ES-Dscp|| -||Zhang Lab||Kun||40bp||9991852||- |- | July 28||HL002||Exome||s3,Hues 6 ES-trp|| -||Zhang Lab||Kun||40bp||8386791||- |- | July 28||HL002||Exome||s4,NA12878|| -||Zhang Lab||[[Alice:LabNotes/2009-7-21|Alice]]||40bp||15015962||- |- | July 28||HL002||Exome||s5,NA12878|| -||Zhang Lab||[[Alice:LabNotes/2009-7-21|Alice]]||40bp||15092576||- |- | July 28||HL002||Exome||s6,NA12878|| -||Zhang Lab||[[Alice:LabNotes/2009-7-21|Alice]]||40bp||15223607||- |- | July 28||HL002||Exome||s7,PGP10|| -||Zhang Lab||[[Alice:LabNotes/2009-7-21|Alice]]||40bp||15059266||- |- | July 28||HL002||RNA||s8,CES8k-Hybrid1-ES|| -||Zhang Lab||Kun||40bp||8178891||- |} ===Jan-Jun=== {| {{table}} | align="center" style="background:#f0f0f0;"|'''Month''' | align="center" style="background:#f0f0f0;"|'''Date''' | align="center" style="background:#f0f0f0;"|'''Probe Set''' | align="center" style="background:#f0f0f0;"|'''Tube label''' | align="center" style="background:#f0f0f0;"|'''Conc. x vol.''' | align="center" style="background:#f0f0f0;"|'''Seq facility''' | align="center" style="background:#f0f0f0;"|'''Lib. Const.''' | align="center" style="background:#f0f0f0;"|'''Read length''' | align="center" style="background:#f0f0f0;"|'''# filtered reads''' | align="center" style="background:#f0f0f0;"|'''# mappable reads''' |- | Feb||6||BSPP-30k-PE||BJ||75.4nM x 15ul;||BioGem||[[Jie:LabNotes/CpgSeq/2009-1-13|Jie]]||36bp x 2||7,662,828||2,535,784 |- | Feb||6||BSPP-30k-PE|| Hybrid_1||87.6nM x 15ul;||BioGem||[[Jie:LabNotes/CpgSeq/2009-1-13|Jie]]||36bp x 2||6,829,142||1,946,531 |- | Feb||6||BSPP-30k-PE|| PGP1_F||106nM x 15ul;||BioGem||[[Jie:LabNotes/CpgSeq/2009-1-13|Jie]]||36bp x 2||8,441,376||2,854,604 |- | Feb||6||BSPP-30k-PE|| HUES12||74.9nM x 15ul;||BioGem||[[Jie:LabNotes/CpgSeq/2009-1-13|Jie]]||36bp x 2||7,404,514||1,424,697 |- | Feb||6||BSPP-30k-PE|| PGP1_iPS1||90.3nM x 15ul;||BioGem||[[Jie:LabNotes/CpgSeq/2009-1-22|Jie]]||36bp x 2||5,617,832||1,899,427 |- | Feb||6||BSPP-30k-PE|| PGP1_L||77.6nM x 15ul;||BioGem||[[Jie:LabNotes/CpgSeq/2009-1-22|Jie]]||36bp x 2||5,258,188||2,220,886 |- | Feb||6||BSPP-30k-PE|| PGP3_L||80.9nM x 15ul;||BioGem||[[Jie:LabNotes/CpgSeq/2009-1-22|Jie]]||36bp x 2||5,286,442||1,838,971 |- | Feb||6||BSPP-30k-PE|| PGP9_L||96.9nM x 15ul;||BioGem||[[Jie:LabNotes/CpgSeq/2009-1-22|Jie]]||36bp x 2||5,689,552||2,292,028 |- | |||||||||||| |- | March||13||Exome||PGP1-CTRL||48.5ng/ul; 30ul||Billy Li (Harvard)||[[Alice:LabNotes/2009-3-13|Alice Li]]||40bp||9,707,995||7,655,774 |- | March||13||Exome||PGP1-shaked||46ng/ul; 30ul||Billy Li (Harvard)||[[Alice:LabNotes/2009-3-13|Alice Li]]||40bp||9,424,752||7,561,445 |- | |||||||||||| |- | |||||||||||| |- | May||25||Exome||PGP1E0509A||77nM; 40ul||BioGem||[[Alice:LabNotes/2009-5-24|Alice Li]]||76bp||7,471,741||1,086,264 |- | May||25||Exome||PGP2E0509A||64nM; 40ul||BioGem||[[Alice:LabNotes/2009-5-24|Alice Li]]||76bp||5,014,823||2,595,521 |- | May||25||Exome||PGP3E0509A||49.5nM; 40ul||BioGem||[[Alice:LabNotes/2009-5-24|Alice Li]]||76bp||5,358,442||3,213,790 |- | May||25||Exome||NA12878E0509A||60nM; 40ul||BioGem||[[Alice:LabNotes/2009-5-24|Alice Li]]||76bp||7,360,495||2,673,495 |- | May||25||Exome||PGP1E0509k||19nM; 40ul||BioGem||[[Kun:LabNotes/ExonomeSeq/2009-5-23|Kun Zhang]]||76bp||3,520,981||2,350,708 |- | May||25||Exome||PGP2E0509k||20nM; 40ul||BioGem||[[Kun:LabNotes/ExonomeSeq/2009-5-23|Kun Zhang]]||76bp||5,095,881||2,568,349 |- | May||25||Exome||PGP3E0509k||19nM; 40ul||BioGem||[[Kun:LabNotes/ExonomeSeq/2009-5-23|Kun Zhang]]||76bp||3,734,068||1,989,542 |- | May||25||Exome||NA12878E0509k||33nM; 40ul||BioGem||[[Kun:LabNotes/ExonomeSeq/2009-5-23|Kun Zhang]]||76bp||3,900,764||778,134 |- | |||||||||||| |- | |||||||||||| |- | May ||26||BSPP_end seq||NA21070*1 100406 captured targets|| 25.3ng/ul (96nM) x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-5-20|Jie]]/[[Kun:LabNotes/CpgSeq/2009-6-9|Kun]]||40bp||2,535,463 |- | May ||26||BSPP_end seq|| NA21070*1 100406 normalized captured targets|| 23.1ng/ul (87nM) x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-5-20|Jie]]/[[Kun:LabNotes/CpgSeq/2009-6-9|Kun]]||40bp||2,377,687 |- | |||||||||||| |- | May||29||Exome(end sequencing)||PGP2_052909A||111nM; 15ul||Yuan Gao||[[Alice:LabNotes/2009-5-29|Alice Li]]||40bp||6,390,979 |- | May||29||Exome(end sequencing)||PGP3_052909A||126nM; 15ul||Yuan Gao||[[Alice:LabNotes/2009-5-29|Alice Li]]||40bp||6,110,991 |- | |||||||||||| |- | |||||||||||| |- | June||4||Exome||PGP5-1-060809||62.5nM; 10ul||BioGem||[[Alice:LabNotes/2009-6-4|Alice Li]]||36bp||14,404,283||10,812,047 |- | June||4||Exome||PGP5-2-060809||65.7nM; 10ul||BioGem||[[Alice:LabNotes/2009-6-4|Alice Li]]||36bp||14,994,770||11,253,456 |- | June||4||Exome||PGP7-1-060809||75.5nM; 10ul||BioGem||[[Alice:LabNotes/2009-6-4|Alice Li]]||36bp||13,384,832||9,712,648 |- | June||4||Exome||PGP7-2-060809||79.7nM; 20ul||BioGem||[[Alice:LabNotes/2009-6-4|Alice Li]]||36bp||14,204,382/13,509,137||10,519,374/9,961,481 |- | |||||||||||| |- | |||||||||||| |- | June||8||BSPP||DF6-9-9_P16(4)|| 11nM x 10ul x 2 lanes;||BioGem||[[Jie:LabNotes/CpgSeq/2009-5-29|Jie]]||36bp||7,272,312|4,688,926 |- | June||8||BSPP||foreskin|| 15nM x 10ul x 1 lane.||BioGem||[[Jie:LabNotes/CpgSeq/2009-5-29|Jie]]||36bp||3,320,865||1,825,557 |- | |||||||||||| |- | June||10||Exome||PGP1-3-061009||34nM; 15ul||Bing Ren||[[Alice:LabNotes/2009-6-10|Alice Li]]||76bp||5,802,565|| |- | June||10||Exome||PGP2-3-061009||25nM; 15ul||Bing Ren||[[Alice:LabNotes/2009-6-10|Alice Li]]||76bp||3,193,644|| |- | June||10||Exome||PGP3-3-061009||22nM; 15ul||Bing Ren||[[Alice:LabNotes/2009-6-10|Alice Li]]||76bp||2,465,788|| |- | June||10||Exome||NA12878-3-061009||22nM; 15ul||Bing Ren||[[Alice:LabNotes/2009-6-10|Alice Li]]||76bp||1,285,265|| |- | June||10||BSPP||NA21070*1_100406_97k ||21.2nM x 14ul;||Bing Ren||[[Jie:LabNotes/CpgSeq/2009-6-4|Jie]]||76bp||2,682,703||424,191 |- | June||10||BSPP||DF6-9-9_P16(4)_30k ||21.2nM x 14ul;||Bing Ren||[[Jie:LabNotes/CpgSeq/2009-6-4|Jie]]||76bp||918,811||151,519 |- | June||10||BSPP||foreskin_30k ||21.2nM x 14ul;||Bing Ren||[[Jie:LabNotes/CpgSeq/2009-6-4|Jie]]||76bp||424,770||65,177 |- | |||||||||||| |- | |||||||||||| |- | June||18||Exome||PGP5-1-060809||62.5nM; 5ul||Bing Ren||[[Alice:LabNotes/2009-6-4|Alice Li]]||41bp||4,122,460 |- | June||18||Exome||PGP5-2-060809||65.7nM; 5ul||Bing Ren||[[Alice:LabNotes/2009-6-4|Alice Li]]||41bp||3,907,906 |- | June||18||Exome||PGP7-1-060809||75.5nM; 5ul||Bing Ren||[[Alice:LabNotes/2009-6-4|Alice Li]]||41bp||1,419,496 |- |- | June||18||CES27k9bp_end sequening||Hybrid_1_CES27k9bp|| 4.3ng/ul (37nM) x 5ul||Bing Ren||[[Jie:LabNotes/ASE/2009-6-10|Jie]]||41bp||7,484,832 |- | June||18||CES27k9bp_end sequening|| BJ_CES27k9bp||7.2ng/ul (62nM) x 5ul||Bing Ren||[[Jie:LabNotes/ASE/2009-6-10|Jie]]||41bp||5,643,984 |- | June||18||BSPP||DF6-9-9_P16(4)_97k_repeat|| 11nM x 5ul||Bing Ren||[[Jie:LabNotes/CpgSeq/2009-5-29|Jie]]||41bp||4,761,133 |- | June||18||BSPP||foreskin_97k_repeat ||7.5nM x 5ul||Bing Ren||[[Jie:LabNotes/CpgSeq/2009-5-29|Jie]]||41bp||6,683,303 |}
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