GA record: Difference between revisions

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[[Media:GA Run Records.xls|GA Run Records]]
==2013==
{| {{table}}
| align="center" style="background:#f0f0f0;"|'''Run'''
| align="center" style="background:#f0f0f0;"|'''Tracking'''
| align="center" style="background:#f0f0f0;"|'''1st Cycle Report'''
| align="center" style="background:#f0f0f0;"|'''Summary'''
| align="center" style="background:#f0f0f0;"|'''% Good Clusters'''
| align="center" style="background:#f0f0f0;"|'''Yield (kbases)'''
|-
| 130104_SN1001||[[Media:130104_SN1001.pdf|Tracking]]||[[Media:130104_SN1001_FBase.pdf|FBase]]||[[Media:130104_SN1001_Summary.pdf|Summary]]||92.19||358,197,114
|-
| 130119_HL141||[[Media:130119_HL141.pdf|Tracking]]||[[Media:130119_HL141_FBase.pdf|FBase]]||[[Media:130119_HL141_Summary.pdf|Summary]]||?||?
|-
| 130128_HL142||[[Media:130128_HL142.pdf|Tracking]]||[[Media:130128_HL142_FBase.pdf|FBase]]||[[Media:130128_HL142_Summary.pdf|Summary]]||?||?
|-
| 130205_MiSeqFeb5||[[Media:130205_MiSeqFeb5.pdf|Tracking]]||[[Media:130205_MiSeqFeb5_FBase.pdf|FBase]]||[[Media:130205_MiSeqFeb5_Summary.pdf|Summary]]||?||?
|-
| 130207_HL143||[[Media:130207_HL143.pdf|Tracking]]||[[Media:130207_HL143_FBase.pdf|FBase]]||[[Media:130207_HL143_Summary.pdf|Summary]]||?||?
|-
| 130219_HL144||[[Media:130219_HL144.pdf|Tracking]]||[[Media:130219_HL144_FBase.pdf|FBase]]||[[Media:130219_HL144_Summary.pdf|Summary]]||?||?
|-
| 130227_HiSeqFeb27||[[Media:130227_HiSeqFeb27.pdf|Tracking]]||[[Media:130227_HiSeqFeb27_FBase.pdf|FBase]]||[[Media:130227_HiSeqFeb27_Summary.pdf|Summary]]||?||?
|-
| 130226_HL145||[[Media:130226_HL145.pdf|Tracking]]||[[Media:130226_HL145_FBase.pdf|FBase]]||[[Media:130226_HL145_Summary.pdf|Summary]]||81%||18,771,616 (PE 50+7+50 reads, Lane 5 overloaded)
|-
| 130306_HL146||[[Media:130306_HL146.pdf|Tracking]]||[[Media:130306_HL146_FBase.pdf|FBase]]||[[Media:130306_HL146_Summary.pdf|Summary]]||73.1%||12,229,391 (SE 36+7 reads)
|-
| 130316_HL147||[[Media:130316_HL147.pdf|Tracking]]||[[Media:130316_HL147_FBase.pdf|FBase]]||[[Media:130316_HL147_Summary.pdf|Summary]]||?||?
|-
| 130321_HL148||[[Media:130321_HL148.pdf|Tracking]]||[[Media:130321_HL148_FBase.pdf|FBase]]||[[Media:130321_HL148_Summary.pdf|Summary]]||82.8%||11,624,271
|-
| 130322_Miseq||[[Media:130322_Miseq.pdf|Tracking]]||[[Media:130322_Miseq_FBase.pdf|FBase]]||[[Media:130322_Miseq_Summary.pdf|Summary]]||?||?
|-
| 130327_HiSeqMar27||[[Media:130327_HiSeqMar27.pdf|Tracking]]||[[Media:130327_HiSeqMar27_FBase.pdf|FBase]]||[[Media:130327_HiSeqMar27_Summary.pdf|Summary]]||?||31,473,118
|-
| 130402_Miseq||[[Media:130402_Miseq.pdf|Tracking]]||[[Media:130402_Miseq_FBase.pdf|FBase]]||[[Media:130402_Miseq_Summary.pdf|Summary]]||?||?
|-
| 130402_HL149||[[Media:130402_HL149.pdf|Tracking]]||[[Media:130402_HL149_FBase.pdf|FBase]]||[[Media:130402_HL149_Summary.pdf|Summary]]||81.3%||13,889,196
|-
| 130409_HL150||[[Media:130409_HL150.pdf|Tracking]]||[[Media:130409_HL150_FBase.pdf|FBase]]||[[Media:130409_HL150_Summary.pdf|Summary]]||84.5%||14,929,290
|-
| 130409_Miseq||[[Media:130409_Miseq.pdf|Tracking]]||[[Media:130409_Miseq_FBase.pdf|FBase]]||[[Media:130409_Miseq_Summary.pdf|Summary]]||?||?
|-
| 130430_HL151||[[Media:130430_HL151.pdf|Tracking]]||[[Media:130430_HL151_FBase.pdf|FBase]]||[[Media:130430_HL151_Summary.pdf|Summary]]||90.93%||11,274,256
|-
| 130521_HL152||[[Media:130521_HL152.pdf|Tracking]]||[[Media:130521_HL152_FBase.pdf|FBase]]||[[Media:130521_HL152_Summary.pdf|Summary]]||79.85%||14,463,774
|-
| 130528_HL153||[[Media:130528_HL153.pdf|Tracking]]||[[Media:130528_HL153_FBase.pdf|FBase]]||[[Media:130528_HL153_Summary.pdf|Summary]]||87.97%?||23,767,498
|-
| 130612_HL154||[[Media:130612_HL154.pdf|Tracking]]||[[Media:130612_HL154_FBase.pdf|FBase]]||[[Media:130612_HL154_Summary.pdf|Summary]]||?||?
|-
| 130614_Miseq||[[Media:130614_Miseq.pdf|Tracking]]||[[Media:130614_Miseq_FBase.pdf|FBase]]||[[Media:130614_Miseq_Summary.pdf|Summary]]||?||?
|-
| 130618_Miseq||[[Media:130618_Miseq.pdf|Tracking]]||[[Media:130618_Miseq_FBase.pdf|FBase]]||[[Media:130618_Miseq_Summary.pdf|Summary]]||?||?
|-
| 130628_HL155||[[Media:130628_HL155.pdf|Tracking]]||[[Media:130628_HL155_FBase.pdf|FBase]]||[[Media:130628_HL155_Summary.pdf|Summary]]||?||?
|-
| 130715_HL156||[[Media:130715_HL156.pdf|Tracking]]||[[Media:130715_HL156_FBase.pdf|FBase]]||[[Media:130715_HL156_Summary.pdf|Summary]]||?||?
|-
| 130807_HL157||[[Media:130807_HL157.pdf|Tracking]]||[[Media:130807_HL157_FBase.pdf|FBase]]||[[Media:130807_HL157_Summary.pdf|Summary]]||?||?
|-
| 130812_HL158||[[Media:130812_HL158.pdf|Tracking]]||[[Media:130812_HL158_FBase.pdf|FBase]]||[[Media:130812_HL158_Summary.pdf|Summary]]||?||?
|-
| 130903_HL159||[[Media:130903_HL159.pdf|Tracking]]||[[Media:130903_HL159_FBase.pdf|FBase]]||[[Media:130903_HL159_Summary.pdf|Summary]]||?||?
|-
| 130917_HL160||[[Media:130917_HL160.pdf|Tracking]]||[[Media:130917_HL160_FBase.pdf|FBase]]||[[Media:130917_HL160_Summary.pdf|Summary]]||?||?
|-
| 131009_HL161||[[Media:131009_HL161.pdf|Tracking]]||[[Media:131009_HL161_FBase.pdf|FBase]]||[[Media:131009_HL161_Summary.pdf|Summary]]||?||?
|}
 
==2012==
{| {{table}}
| align="center" style="background:#f0f0f0;"|'''Run'''
| align="center" style="background:#f0f0f0;"|'''Tracking'''
| align="center" style="background:#f0f0f0;"|'''1st Cycle Report'''
| align="center" style="background:#f0f0f0;"|'''Summary'''
| align="center" style="background:#f0f0f0;"|'''% Good Clusters'''
| align="center" style="background:#f0f0f0;"|'''Yield (kbases)'''
|-
| 120125_HL113||[[Media:120125_HL113.pdf|Tracking]]||[[Media:120125_HL113_FBase.pdf|FBase]]||[[Media:120125_HL113_Summary.pdf|Summary]]||69.61||22900852 (First attempt failed, probably due to bad reagents. The second one was better. However, lane 7&8 still have very poor quality.)
|-
|-
| 120209_HiseqFeb09||[[Media:120209_HiseqFeb09.pdf|Tracking]]||[[Media:120209_HiSeqFeb09_FBase.pdf|FBase]]||[[Media:120209_HiseqFeb09_Summary.pdf|Summary]]||?||382,585,278 (@ BioGem)
|-
|-
| 120210_HL114||[[Media:120210_HL114.pdf|Tracking]]||[[Media:120210_HL114_FBase.pdf|FBase]]||[[Media:120210_HL114_Summary.pdf|Summary]]||79.14||25,971,886
|-
|-
| 120217_HL115||[[Media:120217_HL115.pdf|Tracking]]||[[Media:120217_HL115_FBase.pdf|FBase]]||[[Media:120217_HL115_Summary.pdf|Summary]]||?||Read 2 Failed, Rehyb unsuccessful, Received illumina replacement
|-
|-
| 120313_HiseqMar13||[[Media:120313_HiseqMar13.pdf|Tracking]]||[[Media:120313_HiseqMar13_FBase.pdf|FBase]]||[[Media:120313_HiseqMar13_Summary.pdf|Summary]]||92.95||318,641,613
|-
|-
| 120317_HL116||[[Media:120317_HL116.pdf|Tracking]]||[[Media:120317_HL116_FBase.pdf|FBase]]||[[Media:120317_HL116_Summary.pdf|Summary]]||?||?
|-
|-
| 120412_HL117||[[Media:120412_HL117.pdf|Tracking]]||[[Media:120412_HL117_FBase.pdf|FBase]]||[[Media:120412_HL117_Summary.pdf|Summary]]||?||? Read 2 Failed kits replaced
|-
|-
| 120426_HL118||[[Media:120426_HL118.pdf|Tracking]]||[[Media:120426_HL118_FBase.pdf|FBase]]||[[Media:120426_HL118_Summary.pdf|Summary]]||?||~50Gb
|-
|-
| 120503_HiseqMay04||[[Media:120426_HiseqApr26.pdf|Tracking]]||[[Media:120503_May04_FBase.pdf|FBase]]||[[Media:120504_HiseqMay04_Summary.pdf|Summary]]||95.47||291,670,307
|-
|-
| 120510_HiseqMay10||[[Media:120510_HiseqMay10.pdf|Tracking]]||[[Media:120510_May10_FBase.pdf|FBase]]||[[Media:120510_HiseqMay10_Summary.pdf|Summary]]||93.34||347,495,254
|-
|-
| 120525_HiseqMay25||[[Media:120516_HiseqMay16.pdf|Tracking]]||[[Media:120516_May16_FBase.pdf|FBase]]||[[Media:120516_HiseqMay16_Summary.pdf|Summary]]||81.77%||260,691,319
|-
|-
| 120519_HL119||[[Media:120519_HL119.pdf|Tracking]]||[[Media:120519_HL119_FBase.pdf|FBase]]||[[Media:120519_HL118_Summary.pdf|Summary]]||55.5%||12,262,059
|-
|-
| 120531_HiseqMay31||[[Media:120529_HiseqMay29.pdf|Tracking]]||[[Media:120529_May29_FBase.pdf|FBase]]||[[Media:120529_HiseqMay29_Summary.pdf|Summary]]||90.53%||408,717,804
|-
|-
| 120531_HL120||[[Media:120531_HL120.pdf|Tracking]]||[[Media:120531_HL120_FBase.pdf|FBase]]||[[Media:120531_HL120_Summary.pdf|Summary]]||?||?
|-
|-
| 120608_HiseqJun08||[[Media:120608_HiseqJun08.pdf|Tracking]]||[[Media:120608_HiseqJun08_FBase.pdf|FBase]]||[[Media:120608_HiseqJun08_Summary.pdf|Summary]]||96.99%||172,621,300
|-
| 120702_HL124||[[Media:120702_HL124.pdf|Tracking]]||[[Media:120702_HL124_FBase.pdf|FBase]]||[[Media:120702_HL124_Summary.pdf|Summary]]||88.08||33,307,344
Intensities low for read 3 terminate run early at cycle 168
|-
| 120712_HL125||[[Media:120712_HL125.pdf|Tracking]]||[[Media:120712_HL125_FBase.pdf|FBase]]||[[Media:120712_HL125_Summary.pdf|Summary]]||79.12||16,601,513
|-
| 120711_HiSeqJul11||[[Media:120711_HiSeqJul11.pdf|Tracking]]||[[Media:120711_HiSeqJul11_FBase.pdf|FBase]]||[[Media:120711_HiSeqJul11_Summary.pdf|Summary]]||94.06||301,875,173
|-
| 120716_HL126||[[Media:120716_HL126.pdf|Tracking]]||[[Media:120716_HL126_FBase.pdf|FBase]]||[[Media:120716_HL126_Summary.pdf|Summary]]||80.65||11,488,063
|-
| 120727_HL127||[[Media:120727_HL127.pdf|Tracking]]||[[Media:120727_HL127_FBase.pdf|FBase]]||[[Media:120727_HL127_Summary.pdf|Summary]]||85.67||28,477,248
|-
| 120807_HL128||[[Media:120807_HL128.pdf|Tracking]]||[[Media:120807_HL128_FBase.pdf|FBase]]||[[Media:120807_HL128_Summary.pdf|Summary]]||88.52||14,546,195
|-
| 120818_HL129||[[Media:120818_HL129.pdf|Tracking]]||[[Media:120818_HL129_FBase.pdf|FBase]]||[[Media:120818_HL129_Summary.pdf|Summary]]||74.32||15,944,231
|-
| 120828_HiSeqAug28||[[Media:120828_HiSeqAug28.pdf|Tracking]]||[[Media:120828_HiSeqAug28_FBase.pdf|FBase]]||[[Media:120828_HiSeqAug28_Summary.pdf|Summary]]||90.41||320,114,704
|-
| 120906_DD004||[[Media:120906_DD004.png|Tracking]]||[[Media:120906_DD004_FBase.pdf|FBase]]||[[Media:120906_DD004_Summary.pdf|Summary]]||68.85||9,553,625(s1,s2,s3 were underloaded, s8 no cluster)
|-
| 120917_HL130||[[Media:120917_HL130.pdf|Tracking]]||[[Media:120917_HL130_FBase.pdf|FBase]]||[[Media:120917_HL130_Summary.pdf|Summary]]||80.49||6,971,676 (s8 no cluster, replacement received for both runs)
|-
| 121004_HL131||[[Media:121004_HL131.pdf|Tracking]]||[[Media:121004_HL131_FBase.pdf|FBase]]||[[Media:121004_HL131_Summary.pdf|Summary]]||88.95||9,465,433
|-
| 121017_HL132||[[Media:121017_HL132.pdf|Tracking]]||[[Media:121017_HL132_FBase.pdf|FBase]]||[[Media:121017_HL132_Summary.pdf|Summary]]||88.01||9,615,198
|-
| 121026_HL133||[[Media:121026_HL133.pdf|Tracking]]||[[Media:121026_HL133_FBase.pdf|FBase]]||[[Media:121026_HL133_Summary.pdf|Summary]]||88.45||33,030,297
|-
| 121101_HL134||[[Media:121101_HL134.pdf|Tracking]]||[[Media:121101_HL134_FBase.pdf|FBase]]||[[Media:121101_HL134_Summary.pdf|Summary]]||89.09||13,324,015
|-
|| 121108_HL135||[[Media:121108_HL135.pdf|Tracking]]||[[Media:121108_HL135_FBase.pdf|FBase]]||[[Media:121108_HL135_Summary.pdf|Summary]]||82.61||25,068,908 (s7 no cluster, line clogged?, replacement received)
|-
| 121108_HiSeqNov8||[[Media:121108_HiSeqNov8.pdf|Tracking]]||[[Media:121108_HiSeqNov8_FBase.pdf|FBase]]||[[Media:121108_HiSeqNov8_Summary.pdf|Summary]]||?||?
|-
| 121120_HL136||[[Media:121120_HL136.pdf|Tracking]]||[[Media:121120_HL136_FBase.pdf|FBase]]||[[Media:121120_HL136_Summary.pdf|Summary]]||57.82||8,626,041 (s1-s7of HL135 & s2 no visible clusters, library issue?)
|-
| 121130_HL137||[[Media:121130_HL137.pdf|Tracking]]||[[Media:121130_HL137_FBase.pdf|FBase]]||[[Media:121130_HL137_Summary.pdf|Summary]]||?||? (s1 no clusters, s2 primer lawn issue, FC reimbursed)
|-
| 121210_HL137_2||[[Media:121210_HL137_2.pdf|Tracking]]||[[Media:121210_HL137_2_FBase.pdf|FBase]]||[[Media:121210_HL137_2_Summary.pdf|Summary]]||75.4||9,607,022
|-
| 121214_HL138||[[Media:121214_HL138.pdf|Tracking]]||[[Media:121214_HL138_FBase.pdf|FBase]]||[[Media:121214_HL138_Summary.pdf|Summary]]||?||?
|-
| 121218_HL139||[[Media:121218_HL139.pdf|Tracking]]||[[Media:121218_HL139_FBase.pdf|FBase]]||[[Media:121218_HL139_Summary.pdf|Summary]]||?||?
|-
| 121222_HL140||[[Media:121222_HL140.pdf|Tracking]]||[[Media:121222_HL140_FBase.pdf|FBase]]||[[Media:121222_HL140_Summary.pdf|Summary]]||?||?(read1 rehyb, 2x36sbs kits replaced)
|}
 
==2011==
{| {{table}}
| align="center" style="background:#f0f0f0;"|'''Run'''
| align="center" style="background:#f0f0f0;"|'''Tracking'''
| align="center" style="background:#f0f0f0;"|'''1st Cycle Report'''
| align="center" style="background:#f0f0f0;"|'''Summary'''
| align="center" style="background:#f0f0f0;"|'''% Good Clusters'''
| align="center" style="background:#f0f0f0;"|'''Yield (kbases)'''
|-
|-
| 110112_HL086||[[Media:110112_HL086.pdf|Tracking]]||[[Media:110112_HL086_FBase.pdf|FBase]]||[[Media:110112_HL086_Summary.pdf|Summary]]||90.6||27,432,853
|-
|-
| 110119_HL087||[[Media:110119_HL087.pdf|Tracking]]||[[Media:110119_HL087_FBase.pdf|FBase]]||[[Media:110119_HL087_Summary.pdf|Summary]]||85.44||48,665,171
|-
|-
| 110303_HL088||[[Media:110303_HL088.pdf|Tracking]]||[[Media:110303_HL088_FBase.pdf|FBase]]||[[Media:110303_HL088_Summary.pdf|Summary]]||79.01||23,332,319
|-
|-
| 110307_HL089||[[Media:110307_HL089.pdf|Tracking]]||[[Media:110307_HL089_FBase.pdf|FBase]]||[[Media:110307_HL089_Summary.pdf|Summary]]||87.23||48,487,197
|-
|-
| 110318_HL090||[[Media:110318_HL090.pdf|Tracking]]||[[Media:110318_HL090_FBase.pdf|FBase]]||[[Media:110318_HL090_Summary.pdf|Summary]]||80.98||23,299,776
|-
|-
| 110323_HL091||[[Media:110323_HL091.pdf|Tracking]]||[[Media:110323_HL091_FBase.pdf|FBase]]||[[Media:110323_HL091_Summary.pdf|Summary]]||83||29,265,834
|-
|-
| 110408_HL092||[[Media:110408_HL092.pdf|Tracking]]||[[Media:110408_HL092_FBase.pdf|FBase]]||[[Media:110408_HL092_Summary.pdf|Summary]]||81.22||12,957,480
|-
|-
| 110417_HL093||[[Media:110417_HL093.pdf|Tracking]]||[[Media:110417_HL093_FBase.pdf|FBase]]||[[Media:110417_HL093_Summary.pdf|Summary]]||83.85||19,081,551
|-
|-
| 110513_HL094||[[Media:110513_HL094.pdf|Tracking]]||[[Media:110513_HL094_FBase.pdf|FBase]]||[[Media:110513_HL094_Summary.pdf|Summary]]||80.27||77,575,532
|-
|-
| 110608_HL095||[[Media:110608_HL095.pdf|Tracking]]||[[Media:110608_HL095_FBase.pdf|FBase]]||[[Media:110608_HL095_Summary.pdf|Summary]]||82||24,590,778
|-
|-
| 110619_HL096||[[Media:110619_HL096.pdf|Tracking]]||[[Media:110619_HL096_FBase.pdf|FBase]]||[[Media:110619_HL096_Summary.pdf|Summary]]||85.84||27,172,886 (2nd reads failed)
|-
|-
| 110626_HL097||[[Media:110626_HL097.pdf|Tracking]]||[[Media:110626_HL097_FBase.pdf|FBase]]||[[Media:110626_HL097_Summary.pdf|Summary]]||78.6||25,943,849 (Repeat of HL096)
|-
|-
| 110714_HL098||[[Media:110714_HL098.pdf|Tracking]]||[[Media:110714_HL098_FBase.pdf|FBase]]||[[Media:110714_HL098_Summary.pdf|Summary]]||85.93||51,666,958
|-
|-
| 110726_HL099||[[Media:110726_HL099.pdf|Tracking]]||[[Media:110726_HL099_FBase.pdf|FBase]]||[[Media:110726_HL099_Summary.pdf|Summary]]||74||14,508,606
|-
|-
| 110811_HL100||[[Media:110811_HL100.pdf|Tracking]]||[[Media:110811_HL100_FBase.pdf|FBase]]||[[Media:110811_HL100_Summary.pdf|Summary]]||74||8,597,569
|-
|-
| 110902_HL101||[[Media:110902_HL101.pdf|Tracking]]||[[Media:110902_HL101_FBase.pdf|FBase]]||[[Media:110902_HL101_Summary.pdf|Summary]]||75||15,810,995
|-
|-
| 110907_HL102||[[Media:110907_HL102.pdf|Tracking]]||[[Media:110907_HL102_FBase.pdf|FBase]]||[[Media:110907_HL102_Summary.pdf|Summary]]||65.47||9,448,824
|-
|-
| 110923_HL103||[[Media:110923_HL103.pdf|Tracking]]||[[Media:110923_HL103_FBase.pdf|FBase]]||[[Media:110923_HL103_Summary.pdf|Summary]]||58.64||15,816,673
|-
|-
| 110929_SN1001(HiSeq)||Tracking||FBase||[[Media:110929_SN1001_Summary.pdf|Summary]]||90.39||366,883,826
|-
|-
| 111013_HL105||[[Media:111013_HL105.pdf|Tracking]]||[[Media:111013_HL105_FBase.pdf|FBase]]||[[Media:111013_HL105_Summary.pdf|Summary]]||80.5||30,080,124
|-
|-
| 111019_HL106||[[Media:111019_HL106.pdf|Tracking]]||[[Media:111019_HL106_FBase.pdf|FBase]]||[[Media:111019_HL106_Summary.pdf|Summary]]||?||?
|-
|-
| 111030_HL107||[[Media:111030_HL107.pdf|Tracking]]||[[Media:111030_HL107_FBase.pdf|FBase]]||[[Media:111030_HL107_Summary.pdf|Summary]]||65.5||15,508,439
|-
|-
| 111109_HL108||[[Media:111109_HL108.pdf|Tracking]]||[[Media:111109_HL108_FBase.pdf|FBase]]||[[Media:111109_HL108_Summary.pdf|Summary]]||63.4||7,910,991
|-
|-
| 111112_HL109||[[Media:111112_HL109.pdf|Tracking]]||[[Media:111112_HL109_FBase.pdf|FBase]]||[[Media:111112_HL109_Summary.pdf|Summary]]||78.2||54,405,997
|-
|-
| 111124_HL110||[[Media:111124_HL110.pdf|Tracking]]||[[Media:111124_HL110_HL109_FBase.pdf|FBase]]||[[Media:111124_HL110_Summary.pdf|Summary]]||78.23||54,405,997 (very low quality for 2nd end)
|-
|-
| 111207_HL111||[[Media:111207_HL111.pdf|Tracking]]||[[Media:111207_HL111_FBase.pdf|FBase]]||[[Media:111207_HL111_Summary.pdf|Summary]]||86.98||391,944,270 (HiSeq PE110)
|-
|-
| 111222_HL112||[[Media:111222_HL112.pdf|Tracking]]||[[Media:111222_HL112_FBase.pdf|FBase]]||[[Media:111222_HL112_Summary.pdf|Summary]]||?||Run failed,cracked manifold, kits replaced by illumina
|-
|
|}
==2010==
{| {{table}}
| align="center" style="background:#f0f0f0;"|'''Run'''
| align="center" style="background:#f0f0f0;"|'''Tracking'''
| align="center" style="background:#f0f0f0;"|'''1st Cycle Report'''
| align="center" style="background:#f0f0f0;"|'''Summary'''
| align="center" style="background:#f0f0f0;"|'''% Good Clusters'''
| align="center" style="background:#f0f0f0;"|'''Yield (kbases)'''
|-
|-
| 100101_HL031||[[Media:100101_HL031_Tracking.pdf|Tracking]]||[[Media:100101_HL031_FBase.pdf|FBase]]||[[Media:100101_HL031_Summary.pdf|Summary]]||?||Failed, overloaded, focusing laser
|-
|-
| 100105_HL032||[[Media:100105_HL032_Tracking.pdf|Tracking]]||[[Media:100105_HL032_FBase.pdf|FBase]]||[[Media:100105_HL032_Summary.pdf|Summary]]||61.24||2,940,492
|-
|-
| 100113_HL033||[[Media:100113_HL033_Tracking.pdf|Tracking]]||[[Media:100113_HL033_FBase.pdf|FBase]]||[[Media:100113_HL033_Summary.pdf|Summary]]||?||?
|-
|-
| 100117_HL034||[[Media:100117_HL034_Tracking.pdf|Tracking]]||[[Media:100117_HL034_FBase.pdf|FBase]]||[[Media:100117_HL034_Summary.pdf|Summary]]||72.28||6,896,056
|-
|-
| 100123_HL035||[[Media:100123_HL035_Tracking.pdf|Tracking]]||[[Media:100123_HL035_FBase.pdf|FBase]]||[[Media:100123_HL035_Summary.pdf|Summary]]||74,49||9,045,278
|-
|-
| 100127_HL036||[[Media:100127_HL036_Tracking.pdf|Tracking]]||[[Media:100127_HL036_FBase.pdf|FBase]]||[[Media:100127_HL036_Summary.pdf|Summary]]||69.07||7,518,218
|-
|-
| 100221_HL037||[[Media:100201_HL037_Tracking.pdf|Tracking]]||[[Media:100201_HL037_FBase.pdf|FBase]]||[[Media:100201_HL037_Summary.pdf|Summary]]||51.39||5,993,304
|-
| 100207_HL038||[[Media:100207_HL038_Tracking.pdf|Tracking]]||[[Media:100207_HL038_FBase.pdf|FBase]]||[[Media:100207_HL038_Summary.pdf|Summary]]||82.62||11,587,982
|-
| 100212_HL039||[[Media:100212_HL039_Tracking.pdf|Tracking]]||[[Media:100212_HL039_FBase.pdf|FBase]]||[[Media:100212_HL039_Summary.pdf|Summary]]||53.7||5,163,203
|-
|-
| 100219_HL040||[[Media:100219_HL040_Tracking.pdf|Tracking]]||[[Media:100219_HL040_FBase.pdf|FBase]]||[[Media:100219_HL040_Summary.pdf|Summary]]||59.35||6,091,535
|- 
|-
| 100226_HL041||[[Media:100226_HL041_Tracking.pdf|Tracking]]||[[Media:100226_HL041_FBase.pdf|FBase]]||[[Media:100226_HL041_Summary.pdf|Summary]]||71.02||11,153,313
|- 
|-
| 100303_HL042||[[Media:100303_HL042_Tracking.pdf|Tracking]]||[[Media:100303_HL042_FBase.pdf|FBase]]||[[Media:100303_HL042_Summary.pdf|Summary]]||68.17||7,113,883
|- 
|-
| 100305_HL043||[[Media:100305_HL043_Tracking.pdf|Tracking]]||[[Media:100305_HL043_FBase.pdf|FBase]]||[[Media:100305_HL043_Summary.pdf|Summary]]||61.8||8,949,130
|- 
|-
| 100309_HL044||[[Media:100309_HL044_Tracking.pdf|Tracking]]||[[Media:100309_HL044_FBase.pdf|FBase]]||[[Media:100309_HL044_Summary.pdf|Summary]]||73.91||6,019,006
|-
|-
| 100312_HL045||[[Media:100312_HL045_Tracking.pdf|Tracking]]||[[Media:100312_HL045_FBase.pdf|FBase]]||[[Media:100312_HL045_Summary.pdf|Summary]]||81.68||14,577,361
|-
|-
| 100318_HL046_2||[[Media:100318_HL046_2_Tracking.pdf|Tracking]]||[[Media:100318_HL046_2_FBase.pdf|FBase]]||[[Media:100318_HL046_2_Summary.pdf|Summary]]||13||Failed(focusing??)
|-
|-
| 100318_HL046_3||[[Media:100318_HL046_Tracking.pdf|Tracking]]||[[Media:100318_HL046_FBase.pdf|FBase]]||[[Media:100318_HL046_Summary.pdf|Summary]]||36.4||3,481,844(overloaded)
|-
|-
| 100326_HL047||[[Media:100326_HL047_Tracking.pdf|Tracking]]||[[Media:100326_HL047_FBase.pdf|FBase]]||[[Media:100326_HL047_Summary.pdf|Summary]]||80.56||15,102,359
|-
|-
| 100329_HL048||[[Media:100329_HL048_Tracking.pdf|Tracking]]||[[Media:100329_HL048_FBase.pdf|FBase]]||[[Media:100329_HL048_Summary.pdf|Summary]]||76.02||6,467,724(38bp,wrong flowcell orientation)
|-
|-
| 100329_HL048_repeat||[[Media:100329_HL048_Tracking.pdf|Tracking]]||[[Media:100329_HL048_repeat_FBase.pdf|FBase]]||[[Media:100329_HL048_repeat_Summary.pdf|Summary]]||80.94||16,728,503
|-
|-
| 100329_DD001||[[Media:100329_DD001.pdf|Tracking]]||[[Media:100329_DD001_FBase.pdf|FBase]]||[[Media:100329_DD001_Summary.pdf|Summary]]||?||Ran 4 complete cycles, ended because of low quality and intensity
|-
|-
| 100329_DD001_repeat||[[Media:100329_DD001.pdf|Tracking]]||[[Media:100329_DD001_FBase_repeat.pdf|FBase]]||[[Media:100329_DD001_Summary.pdf|Summary]]||87.04||5,765,966(flowcell underloaded)
|-
|-
| 100411_HL049_2||[[Media:100411_HL049_2.pdf|Tracking]]||[[Media:100411_HL049_2_FBase_repeat.pdf|FBase]]||[[Media:100411_HL049_2_Summary.pdf|Summary]]||71.04||8,624,535(defective primer lawn)
|-
|-
| 100415_HL050||[[Media:100415_HL050.pdf|Tracking]]||[[Media:100415_HL050_FBase_repeat.pdf|FBase]]||[[Media:100415_HL050_Summary.pdf|Summary]]||83.14||13,132,725
|-
|-
| 100420_HL051||[[Media:100420_HL051.pdf|Tracking]]||[[Media:100420_HL051_FBase_repeat.pdf|FBase]]||[[Media:100420_HL051_Summary.pdf|Summary]]||89.86||2,839,513
|-
|-
| 100424_DD002||[[Media:100424_DD002.pdf|Tracking]]||[[Media:100424_DD002_FBase.pdf|FBase]]||[[Media:100424_DD002_Summary.pdf|Summary]]|| || Ran 24 cycles, Scott said software restarts at 25th and 50th cycles, and was a connection problem regarding problem with re-accessing the recipe file (primary Run folder was stored in network drive instead of D drive. Intensities were low (below 2000 for all lanes), probably due to using primers not from Illumina.
|-
| 100425_DD002_reprimed||[[Media:100425_DD002_reprimed.pdf|Tracking]]||[[Media:100425_DD002_FBase_reprimed.pdf|FBase]]||[[Media:100425_DD002_Summary.pdf|Summary]]|| || Reprimed with standard Illumina primers.
|-
|-
| 100429_HL052||[[Media:100429_HL052.pdf|Tracking]]||[[Media:100429_HL052_FBase.pdf|FBase]]||[[Media:100429_HL052_Summary.pdf|Summary]]||85.95||1,175,185
|-
|-
| 100503_HL053||[[Media:100503_HL053.pdf|Tracking]]||[[Media:100503_HL053_FBase.pdf|FBase]]||[[Media:100503_HL053_Summary.pdf|Summary]]||80.52||31,007,707
|-
|-
| 100514_HL054||[[Media:100514_HL054.pdf|Tracking]]||[[Media:100514_HL054_FBase.pdf|FBase]]||[[Media:100514_HL054_Summary.pdf|Summary]]||89.93||32,835,688
|-
|-
| 100523_HL055||[[Media:100523_HL055.pdf|Tracking]]||[[Media:100523_HL055_FBase.pdf|FBase]]||[[Media:100523_HL05_Summary.pdf|Summary]]||83.12||15775525(2nd reads failed, low intensity)
|-
|-
| 100601_HL056||[[Media:100601_HL056.pdf|Tracking]]||[[Media:100601_HL056_FBase.pdf|FBase]]||[[Media:100601_HL056_Summary.pdf|Summary]]||84.17||17,156,595
|-
|-
| 100605_HL057||[[Media:100605_HL057.pdf|Tracking]]||[[Media:100605_HL057_FBase.pdf|FBase]]||[[Media:100605_HL057_Summary.pdf|Summary]]||88.53||6,862,886
|-
|-
| 100612_HL058||[[Media:100612_HL058.pdf|Tracking]]||[[Media:100612_HL058_FBase.pdf|FBase]]||[[Media:100612_HL058_Summary.pdf|N/A]]||N/A||Overloading and Low Cluster Density
|-
|-
| 100615_HL058_2||[[Media:100615_HL058_2.pdf|Tracking]]||[[Media:100615_HL058_2_FBase.pdf|FBase]]||[[Media:100615_HL058_2_Summary.pdf|Summary]]||62.83||5,242,825
|-
|-
| 100623_HL059||[[Media:100623_HL059.pdf|Tracking]]||[[Media:100623_HL059_FBase.pdf|FBase]]||[[Media:100623_HL059_Summary.pdf|N/A]]||?||Failed (Low Cluster Density)
|-
|-
| 100627_HL060||[[Media:100627_HL060.pdf|Tracking]]||[[Media:100627_HL060_FBase.pdf|FBase]]||[[Media:100627_HL060_Summary.pdf|Summary]]||?||?
|-
|-
| 100630_HL061||[[Media:100630_HL061.pdf|Tracking]]||[[Media:100630_HL061_FBase.pdf|FBase]]||[[Media:100630_HL061_Summary.pdf|Summary]]||?||Stopped due to low number of clusters
|-
|-
| 100701_HL061_2||[[Media:100701_HL061_2.pdf|Tracking]]||[[Media:100701_HL061_2_FBase.pdf|FBase]]||[[Media:100701_HL061_2_Summary.pdf|Summary]]||?||Defected flowcell
|-
|-
| 100703_HL061_3||[[Media:100703_HL061_3.pdf|Tracking]]||[[Media:100703_HL061_3_FBase.pdf|FBase]]||[[Media:100703_HL061_3_Summary.pdf|Summary]]||89.5||11,854,572
|-
|-
| 100707_HL062||[[Media:100707_HL062.pdf|Tracking]]||[[Media:100707_HL062_FBase.pdf|FBase]]||[[Media:100707_HL062_Summary.pdf|Summary]]||91.52||5,171,211
|-
|-
| 100713_HL063||[[Media:100713_HL063.pdf|Tracking]]||[[Media:100713_HL063_FBase.pdf|FBase]]||[[Media:100713_HL063_Summary.pdf|Summary]]||91.19||12,767,919
|-
|-
| 100717_HL064||[[Media:100717_HL064.pdf|Tracking]]||[[Media:100717_HL064_FBase.pdf|FBase]]||[[Media:100717_HL064_Summary.pdf|Summary]]||87.4||11,306,633
|-
|-
| 100721_HL065||[[Media:100721_HL065.pdf|Tracking]]||[[Media:100721_HL065_FBase.pdf|FBase]]||[[Media:100721_HL065_Summary.pdf|Summary]]||87.48||12,959,289
|-
|-
| 100726_HL066||[[Media:100726_HL066.pdf|Tracking]]||[[Media:100726_HL066_FBase.pdf|FBase]]||[[Media:100726_HL066_Summary.pdf|Summary]]||61.5||9,875,407 (Low yield due to bad focusing, mainly on lane 5)
|-
|-
| 100802_HL067||[[Media:100802_HL067.pdf|Tracking]]||[[Media:100802_HL067_FBase.pdf|FBase]]||[[Media:100802_HL067_Summary.pdf|Summary]]||64.16||5,816,951 (Overloaded lane 1 & 2 due to underestimation of library concentration)
|-
|-
| 100807_HL068||[[Media:100807_HL068.pdf|Tracking]]||[[Media:100807_HL068_FBase.pdf|FBase]]||[[Media:100807_HL068_Summary.pdf|Summary]]||87.07||10,732,349
|-
|-
| 100814_HL069||[[Media:100814_HL069.pdf|Tracking]]||[[Media:100814_HL069_FBase.pdf|FBase]]||[[Media:100814_HL069_Summary.pdf|Summary]]||77.39||8,878,272
|-
|-
| 100817_HL070||[[Media:100817_HL070.pdf|Tracking]]||[[Media:100817_HL070_FBase.pdf|FBase]]||[[Media:100817_HL070_Summary.pdf|Summary]]||90.53||10,797,519
|-
|-
| 100825_HL071||[[Media:100825_HL071.pdf|Tracking]]||[[Media:100825_HL071_FBase.pdf|FBase]]||[[Media:100825_HL071_Summary.pdf|Summary]]||83.15||11,955,485
|-
|-
| 100913_HL072||[[Media:100913_HL072.pdf|Tracking]]||[[Media:100913_HL072_FBase.pdf|FBase]]||[[Media:100913_HL072_Summary.pdf|Summary]]||86.49||4,533,300 (No Clusters on lane 7 & 8)
|-
|-
| 100917_HL073||[[Media:100917_HL073.pdf|Tracking]]||[[Media:100917_HL073_FBase.pdf|FBase]]||[[Media:100917_HL073_Summary.pdf|Summary]]||86.46||6,258,409
|-
|-
| 100921_HL074||[[Media:100921_HL074.pdf|Tracking]]||[[Media:100921_HL074_FBase.pdf|FBase]]||[[Media:100921_HL074_Summary.pdf|Summary]]||81.22||10,415,353
|-
|-
| 100925_HL075||[[Media:100925_HL075.pdf|Tracking]]||[[Media:100925_HL075_FBase.pdf|FBase]]||[[Media:100925_HL075_Summary.pdf|Summary]]||80.98||29,364,373
|-
|-
| 101006_HL076||[[Media:101006_HL076.pdf|Tracking]]||[[Media:HL076 first base.pdf|FBase]]||[[Media:101006_HL076_Summary.pdf|Summary]]||87.84||8,005,306
|-
|-
| 100810_DD003||[[Media:100810_DD003_corrected.pdf|Tracking]]||[[Media:DD003 first base.pdf|FBase]]||[[Media:101008_DD003_Summary.pdf|Summary]]||89.08||12821744
|-
|-
| 100812_AL009||[[Media:100812_AL009_corrected.pdf|Tracking]]||[[Media:AL009 first base.pdf|FBase]]||[[Media:101012_AL009_Summary.pdf|Summary]]||86.91||15,843,582
|-
|-
| 101016_HL077||[[Media:101016_HL077.pdf|Tracking]]||[[Media:101016_HL077_FBase.pdf|FBase]]||[[Media:101016_HL077_Summary.pdf|Summary]]||86.02||16,771,454
|-
|-
| 101021_HL078||[[Media:101021_HL078.pdf|Tracking]]||[[Media:101021_HL078_FBase.pdf|FBase]]||[[Media:101021_HL078_Summary.pdf|Summary]]||?||?
|-
|-
| 101026_HL079||[[Media:101026_HL079.pdf|Tracking]]||[[Media:101026_HL079_FBase.pdf|FBase]]||[[Media:101026_HL079_Summary.pdf|Summary]]||61.61||12,414,871
|-
|-
| 101030_HL080||[[Media:101030_HL080.pdf|Tracking]]||[[Media:101030_HL080_FBase.pdf|FBase]]||[[Media:101030_HL080_Summary.pdf|Summary]]||78.26||13,909,754
|-
|-
| 101108_HL081||[[Media:101108_HL081.pdf|Tracking]]||[[Media:101108_HL081_FBase.pdf|FBase]]||[[Media:101108_HL081_Summary.pdf|Summary]]||86.06||43,250,579
|-
|-
| 101117_HL082||[[Media:101117_HL082.pdf|Tracking]]||[[Media:101117_HL082_FBase.pdf|FBase]]||[[Media:101117_HL082_Summary.pdf|Summary]]||81.99||19,504,189
|-
|-
| 101123_HL083||[[Media:101123_HL083.pdf|Tracking]]||[[Media:101123_HL083_FBase.pdf|FBase]]||[[Media:101123_HL083_Summary.pdf|Summary]]||87.92||45,478,237
|-
|-
| 101203_HL084||[[Media:101203_HL084.pdf|Tracking]]||[[Media:101203_HL084_FBase.pdf|FBase]]||[[Media:101203_HL084_Summary.pdf|Summary]]||87.07||21,585,694
|-
|-
| 101209_HL085||[[Media:101209_HL085.pdf|Tracking]]||[[Media:101209_HL085_FBase.pdf|FBase]]||[[Media:101209_HL085_Summary.pdf|Summary]]||86.69||45,305,249
|-
|
|}
==2009==
 
{| {{table}}
{| {{table}}
| align="center" style="background:#f0f0f0;"|'''Run'''
| align="center" style="background:#f0f0f0;"|'''Run'''
Line 40: Line 508:
| 090930_HL012||[[Media:090930_HL012_Tracking.pdf|Tracking]]||[[Media:090930_HL012_FBase.pdf|FBase]]||[[Media:090930_HL012_Summary.pdf|Summary]]||79.06||5598506
| 090930_HL012||[[Media:090930_HL012_Tracking.pdf|Tracking]]||[[Media:090930_HL012_FBase.pdf|FBase]]||[[Media:090930_HL012_Summary.pdf|Summary]]||79.06||5598506
|-  
|-  
|-
| 091008_HL013||[[Media:091008_HL013_Tracking.pdf|Tracking]]||[[Media:091008_HL013_FBase.pdf|FBase]]||[[Media:091008_HL013_Summary.pdf|Summary]]||61.41||4,172,506
|-
|-
| 091012_HL014||[[Media:091012_HL014_Tracking.pdf|Tracking]]||[[Media:091012_HL014_FBase.pdf|FBase]]||[[Media:091012_HL014_Summary.pdf|Summary]]||55.88||2,788,276
|-
|-
| 091015_HL015||[[Media:091015_HL015_Tracking.pdf|Tracking]]||[[Media:091015_HL015_FBase.pdf|FBase]]||[[Media:091015_HL015_Summary.pdf|Summary]]||52.03||4,521,421
|- 
|-
| 091018_HL016||[[Media:091018_HL016_Tracking.pdf|Tracking]]||[[Media:091016_HL016_FBase.pdf|FBase]]||[[Media:091016_HL016_Summary.pdf|Summary]]||67.06||5,059,724
|-
|-
| 091020_HL017||[[Media:091020_HL017_Tracking.pdf|Tracking]]||[[Media:091020_HL017_FBase.pdf|FBase]]||[[Media:091020_HL017_Summary.pdf|Summary]]||68.46||5,633,145
|- 
|-
| 091023_HL018||[[Media:091023_HL018_Tracking.pdf|Tracking]]||[[Media:091023_HL018_FBase.pdf|FBase]]||[[Media:091023_HL018_Summary.pdf|Summary]]||67.73||5,318,108
|- 
|-
| 091026_HL019||[[Media:091026_HL019_Tracking.pdf|Tracking]]||[[Media:091026_HL019_FBase.pdf|FBase]]||[[Media:091026_HL019_Summary.pdf|Summary]]||60.57||4,205,872
|-
|-
| 091029_HL020||[[Media:091029_HL020_Tracking.pdf|Tracking]]||[[Media:091029_HL020_FBase.pdf|FBase]]||[[Media:091029_HL020_Summary.pdf|Summary]]||76.22||7,769,646
|- 
|-
| 091102_HL021||[[Media:091102_HL021_Tracking.pdf|Tracking]]||[[Media:091102_HL021_FBase.pdf|FBase]]||[[Media:091102_HL021_Summary.pdf|Summary]]||Failed||Failed
|- 
|-
| 091110_HL022||[[Media:091110_HL022_Tracking.pdf|Tracking]]||-||[[Media:091110_HL022_Summary.pdf|Summary]]||68.03||5,161,713
|- 
|-
| 091113_HL023||[[Media:091113_HL023_Tracking.pdf|Tracking]]||[[Media:091113_HL023_FBase.pdf|FBase]]||[[Media:091113_HL023_Summary.pdf|Summary]]||80.97||7,083,662
|- 
|-
| 091119_HL024||[[Media:091119_HL024_Tracking.pdf|Tracking]]||[[Media:091119_HL024_FBase.pdf|FBase]]||[[Media:091119_HL024_Summary.pdf|Summary]]||82.8||5,046,487
|- 
|-
| 091123_HL025||[[Media:091123_HL025_Tracking.pdf|Tracking]]||[[Media:091123_HL025_FBase.pdf|FBase]]||[[Media:091123_HL025_Summary.pdf|Summary]]||68.39||5,727,128
|- 
|-
| 091127_HL026||[[Media:091127_HL026_Tracking.pdf|Tracking]]||[[Media:091127_HL026_FBase.pdf|FBase]]||[[Media:091127_HL026_Summary.pdf|Summary]]||82.27||7,045,934
|- 
|-
| 091202_HL027||[[Media:091202_HL027_Tracking.pdf|Tracking]]||[[Media:091202_HL027_FBase.pdf|FBase]]||[[Media:091202_HL027_Summary.pdf|Summary]]||82.46||6,017,845
|-
|-
| 091206_HL028||[[Media:091206_HL028_Tracking.pdf|Tracking]]||[[Media:091206_HL028_FBase.pdf|FBase]]||[[Media:091206_HL028_Summary.pdf|Summary]]||55.12||3,446,764
|-
|-
| 091208_HL029||[[Media:091208_HL029_Tracking.pdf|Tracking]]||[[Media:091208_HL029_FBase.pdf|FBase]]||[[Media:091208_HL029_Summary.pdf|Summary]]||72.26||6,151,726
|-
|-
| 091212_AL005||[[Media:AL004_Tracking.pdf|Tracking]]||[[-]]||[[Media:AL005.pdf|Summary]]||9.94||505,765
|-
| 091217_AL006||[[Media:AL006_Tracking.pdf|Tracking]]||[[Media:AL006-first base.pdf|FBase]]||[[Media:AL006.pdf|Summary]]||74.95||6566654
|-
|-
| 091217_AL007||[[Media:AL007_Tracking.pdf|Tracking]]||[[Media:AL007-first base.pdf|FBase]]||[[Media:AL007.pdf|Summary]]||35.92||2638947
|-
| 091217_AL008||[[Media:AL008_Tracking.pdf|Tracking]]||[[FBase]]||[[Media:091226_AL008_Summary.pdf|Summary]]||27.76||2,197,558(failed, overloaded, focusing laser)
|-
| 091229_HL030||[[Media:091229_HL030_Tracking.pdf|Tracking]]||[[Media:091229_HL030_FBase.pdf|FBase]]||[[Media:091229_HL030_Summary.pdf|Summary]]||84.94||6,385,095
|-
|
|}
|}

Latest revision as of 16:59, 10 October 2013

2013[edit]

Run Tracking 1st Cycle Report Summary % Good Clusters Yield (kbases)
130104_SN1001 Tracking FBase Summary 92.19 358,197,114
130119_HL141 Tracking FBase Summary ? ?
130128_HL142 Tracking FBase Summary ? ?
130205_MiSeqFeb5 Tracking FBase Summary ? ?
130207_HL143 Tracking FBase Summary ? ?
130219_HL144 Tracking FBase Summary ? ?
130227_HiSeqFeb27 Tracking FBase Summary ? ?
130226_HL145 Tracking FBase Summary 81% 18,771,616 (PE 50+7+50 reads, Lane 5 overloaded)
130306_HL146 Tracking FBase Summary 73.1% 12,229,391 (SE 36+7 reads)
130316_HL147 Tracking FBase Summary ? ?
130321_HL148 Tracking FBase Summary 82.8% 11,624,271
130322_Miseq Tracking FBase Summary ? ?
130327_HiSeqMar27 Tracking FBase Summary ? 31,473,118
130402_Miseq Tracking FBase Summary ? ?
130402_HL149 Tracking FBase Summary 81.3% 13,889,196
130409_HL150 Tracking FBase Summary 84.5% 14,929,290
130409_Miseq Tracking FBase Summary ? ?
130430_HL151 Tracking FBase Summary 90.93% 11,274,256
130521_HL152 Tracking FBase Summary 79.85% 14,463,774
130528_HL153 Tracking FBase Summary 87.97%? 23,767,498
130612_HL154 Tracking FBase Summary ? ?
130614_Miseq Tracking FBase Summary ? ?
130618_Miseq Tracking FBase Summary ? ?
130628_HL155 Tracking FBase Summary ? ?
130715_HL156 Tracking FBase Summary ? ?
130807_HL157 Tracking FBase Summary ? ?
130812_HL158 Tracking FBase Summary ? ?
130903_HL159 Tracking FBase Summary ? ?
130917_HL160 Tracking FBase Summary ? ?
131009_HL161 Tracking FBase Summary ? ?

2012[edit]

Run Tracking 1st Cycle Report Summary % Good Clusters Yield (kbases)
120125_HL113 Tracking FBase Summary 69.61 22900852 (First attempt failed, probably due to bad reagents. The second one was better. However, lane 7&8 still have very poor quality.)
120209_HiseqFeb09 Tracking FBase Summary ? 382,585,278 (@ BioGem)
120210_HL114 Tracking FBase Summary 79.14 25,971,886
120217_HL115 Tracking FBase Summary ? Read 2 Failed, Rehyb unsuccessful, Received illumina replacement
120313_HiseqMar13 Tracking FBase Summary 92.95 318,641,613
120317_HL116 Tracking FBase Summary ? ?
120412_HL117 Tracking FBase Summary ? ? Read 2 Failed kits replaced
120426_HL118 Tracking FBase Summary ? ~50Gb
120503_HiseqMay04 Tracking FBase Summary 95.47 291,670,307
120510_HiseqMay10 Tracking FBase Summary 93.34 347,495,254
120525_HiseqMay25 Tracking FBase Summary 81.77% 260,691,319
120519_HL119 Tracking FBase Summary 55.5% 12,262,059
120531_HiseqMay31 Tracking FBase Summary 90.53% 408,717,804
120531_HL120 Tracking FBase Summary ? ?
120608_HiseqJun08 Tracking FBase Summary 96.99% 172,621,300
120702_HL124 Tracking FBase Summary 88.08 33,307,344

Intensities low for read 3 terminate run early at cycle 168

120712_HL125 Tracking FBase Summary 79.12 16,601,513
120711_HiSeqJul11 Tracking FBase Summary 94.06 301,875,173
120716_HL126 Tracking FBase Summary 80.65 11,488,063
120727_HL127 Tracking FBase Summary 85.67 28,477,248
120807_HL128 Tracking FBase Summary 88.52 14,546,195
120818_HL129 Tracking FBase Summary 74.32 15,944,231
120828_HiSeqAug28 Tracking FBase Summary 90.41 320,114,704
120906_DD004 Tracking FBase Summary 68.85 9,553,625(s1,s2,s3 were underloaded, s8 no cluster)
120917_HL130 Tracking FBase Summary 80.49 6,971,676 (s8 no cluster, replacement received for both runs)
121004_HL131 Tracking FBase Summary 88.95 9,465,433
121017_HL132 Tracking FBase Summary 88.01 9,615,198
121026_HL133 Tracking FBase Summary 88.45 33,030,297
121101_HL134 Tracking FBase Summary 89.09 13,324,015
121108_HL135 Tracking FBase Summary 82.61 25,068,908 (s7 no cluster, line clogged?, replacement received)
121108_HiSeqNov8 Tracking FBase Summary ? ?
121120_HL136 Tracking FBase Summary 57.82 8,626,041 (s1-s7of HL135 & s2 no visible clusters, library issue?)
121130_HL137 Tracking FBase Summary ? ? (s1 no clusters, s2 primer lawn issue, FC reimbursed)
121210_HL137_2 Tracking FBase Summary 75.4 9,607,022
121214_HL138 Tracking FBase Summary ? ?
121218_HL139 Tracking FBase Summary ? ?
121222_HL140 Tracking FBase Summary ? ?(read1 rehyb, 2x36sbs kits replaced)

2011[edit]

Run Tracking 1st Cycle Report Summary % Good Clusters Yield (kbases)
110112_HL086 Tracking FBase Summary 90.6 27,432,853
110119_HL087 Tracking FBase Summary 85.44 48,665,171
110303_HL088 Tracking FBase Summary 79.01 23,332,319
110307_HL089 Tracking FBase Summary 87.23 48,487,197
110318_HL090 Tracking FBase Summary 80.98 23,299,776
110323_HL091 Tracking FBase Summary 83 29,265,834
110408_HL092 Tracking FBase Summary 81.22 12,957,480
110417_HL093 Tracking FBase Summary 83.85 19,081,551
110513_HL094 Tracking FBase Summary 80.27 77,575,532
110608_HL095 Tracking FBase Summary 82 24,590,778
110619_HL096 Tracking FBase Summary 85.84 27,172,886 (2nd reads failed)
110626_HL097 Tracking FBase Summary 78.6 25,943,849 (Repeat of HL096)
110714_HL098 Tracking FBase Summary 85.93 51,666,958
110726_HL099 Tracking FBase Summary 74 14,508,606
110811_HL100 Tracking FBase Summary 74 8,597,569
110902_HL101 Tracking FBase Summary 75 15,810,995
110907_HL102 Tracking FBase Summary 65.47 9,448,824
110923_HL103 Tracking FBase Summary 58.64 15,816,673
110929_SN1001(HiSeq) Tracking FBase Summary 90.39 366,883,826
111013_HL105 Tracking FBase Summary 80.5 30,080,124
111019_HL106 Tracking FBase Summary ? ?
111030_HL107 Tracking FBase Summary 65.5 15,508,439
111109_HL108 Tracking FBase Summary 63.4 7,910,991
111112_HL109 Tracking FBase Summary 78.2 54,405,997
111124_HL110 Tracking FBase Summary 78.23 54,405,997 (very low quality for 2nd end)
111207_HL111 Tracking FBase Summary 86.98 391,944,270 (HiSeq PE110)
111222_HL112 Tracking FBase Summary ? Run failed,cracked manifold, kits replaced by illumina

2010[edit]

Run Tracking 1st Cycle Report Summary % Good Clusters Yield (kbases)
100101_HL031 Tracking FBase Summary ? Failed, overloaded, focusing laser
100105_HL032 Tracking FBase Summary 61.24 2,940,492
100113_HL033 Tracking FBase Summary ? ?
100117_HL034 Tracking FBase Summary 72.28 6,896,056
100123_HL035 Tracking FBase Summary 74,49 9,045,278
100127_HL036 Tracking FBase Summary 69.07 7,518,218
100221_HL037 Tracking FBase Summary 51.39 5,993,304
100207_HL038 Tracking FBase Summary 82.62 11,587,982
100212_HL039 Tracking FBase Summary 53.7 5,163,203
100219_HL040 Tracking FBase Summary 59.35 6,091,535
100226_HL041 Tracking FBase Summary 71.02 11,153,313
100303_HL042 Tracking FBase Summary 68.17 7,113,883
100305_HL043 Tracking FBase Summary 61.8 8,949,130
100309_HL044 Tracking FBase Summary 73.91 6,019,006
100312_HL045 Tracking FBase Summary 81.68 14,577,361
100318_HL046_2 Tracking FBase Summary 13 Failed(focusing??)
100318_HL046_3 Tracking FBase Summary 36.4 3,481,844(overloaded)
100326_HL047 Tracking FBase Summary 80.56 15,102,359
100329_HL048 Tracking FBase Summary 76.02 6,467,724(38bp,wrong flowcell orientation)
100329_HL048_repeat Tracking FBase Summary 80.94 16,728,503
100329_DD001 Tracking FBase Summary ? Ran 4 complete cycles, ended because of low quality and intensity
100329_DD001_repeat Tracking FBase Summary 87.04 5,765,966(flowcell underloaded)
100411_HL049_2 Tracking FBase Summary 71.04 8,624,535(defective primer lawn)
100415_HL050 Tracking FBase Summary 83.14 13,132,725
100420_HL051 Tracking FBase Summary 89.86 2,839,513
100424_DD002 Tracking FBase Summary Ran 24 cycles, Scott said software restarts at 25th and 50th cycles, and was a connection problem regarding problem with re-accessing the recipe file (primary Run folder was stored in network drive instead of D drive. Intensities were low (below 2000 for all lanes), probably due to using primers not from Illumina.
100425_DD002_reprimed Tracking FBase Summary Reprimed with standard Illumina primers.
100429_HL052 Tracking FBase Summary 85.95 1,175,185
100503_HL053 Tracking FBase Summary 80.52 31,007,707
100514_HL054 Tracking FBase Summary 89.93 32,835,688
100523_HL055 Tracking FBase Summary 83.12 15775525(2nd reads failed, low intensity)
100601_HL056 Tracking FBase Summary 84.17 17,156,595
100605_HL057 Tracking FBase Summary 88.53 6,862,886
100612_HL058 Tracking FBase N/A N/A Overloading and Low Cluster Density
100615_HL058_2 Tracking FBase Summary 62.83 5,242,825
100623_HL059 Tracking FBase N/A ? Failed (Low Cluster Density)
100627_HL060 Tracking FBase Summary ? ?
100630_HL061 Tracking FBase Summary ? Stopped due to low number of clusters
100701_HL061_2 Tracking FBase Summary ? Defected flowcell
100703_HL061_3 Tracking FBase Summary 89.5 11,854,572
100707_HL062 Tracking FBase Summary 91.52 5,171,211
100713_HL063 Tracking FBase Summary 91.19 12,767,919
100717_HL064 Tracking FBase Summary 87.4 11,306,633
100721_HL065 Tracking FBase Summary 87.48 12,959,289
100726_HL066 Tracking FBase Summary 61.5 9,875,407 (Low yield due to bad focusing, mainly on lane 5)
100802_HL067 Tracking FBase Summary 64.16 5,816,951 (Overloaded lane 1 & 2 due to underestimation of library concentration)
100807_HL068 Tracking FBase Summary 87.07 10,732,349
100814_HL069 Tracking FBase Summary 77.39 8,878,272
100817_HL070 Tracking FBase Summary 90.53 10,797,519
100825_HL071 Tracking FBase Summary 83.15 11,955,485
100913_HL072 Tracking FBase Summary 86.49 4,533,300 (No Clusters on lane 7 & 8)
100917_HL073 Tracking FBase Summary 86.46 6,258,409
100921_HL074 Tracking FBase Summary 81.22 10,415,353
100925_HL075 Tracking FBase Summary 80.98 29,364,373
101006_HL076 Tracking FBase Summary 87.84 8,005,306
100810_DD003 Tracking FBase Summary 89.08 12821744
100812_AL009 Tracking FBase Summary 86.91 15,843,582
101016_HL077 Tracking FBase Summary 86.02 16,771,454
101021_HL078 Tracking FBase Summary ? ?
101026_HL079 Tracking FBase Summary 61.61 12,414,871
101030_HL080 Tracking FBase Summary 78.26 13,909,754
101108_HL081 Tracking FBase Summary 86.06 43,250,579
101117_HL082 Tracking FBase Summary 81.99 19,504,189
101123_HL083 Tracking FBase Summary 87.92 45,478,237
101203_HL084 Tracking FBase Summary 87.07 21,585,694
101209_HL085 Tracking FBase Summary 86.69 45,305,249

2009[edit]

Run Tracking 1st Cycle Report Summary % Good Clusters Yield (kbases)
090721_PhiX_Test_Run Tracking FBase Summary 81.13 3892642
090724_HL001 Tracking FBase Summary 68.99 1729242
090728_HL002 Tracking FBase Summary 67.11 3731327
090805_HL003 Tracking FBase Summary 45.69 3159793
090809_HL004 Tracking FBase Summary 78.26 5806800
090813_HL005 Tracking FBase Summary 38.78 2159875
090816_HL006 Tracking FBase Summary 36.55 2486386
090819_HL007 Tracking N/A N/A N/A 4325020
090826_HL008 Tracking FBase Summary 56.94 4113170
090829_HL009 Tracking FBase Summary Failed
090911_AL001 Tracking - - 41.8 2135001
090918_AL002 Tracking - - 61.54 4,249,626
090923_AL003 Tracking FBase Summary 75.3 5,400,896
090925_HL010 Tracking FBase Summary 61.15 4,676,112
090929_HL011 Tracking FBase Summary 19.14(failed) 1,484,042
090930_HL012 Tracking FBase Summary 79.06 5598506
091008_HL013 Tracking FBase Summary 61.41 4,172,506
091012_HL014 Tracking FBase Summary 55.88 2,788,276
091015_HL015 Tracking FBase Summary 52.03 4,521,421
091018_HL016 Tracking FBase Summary 67.06 5,059,724
091020_HL017 Tracking FBase Summary 68.46 5,633,145
091023_HL018 Tracking FBase Summary 67.73 5,318,108
091026_HL019 Tracking FBase Summary 60.57 4,205,872
091029_HL020 Tracking FBase Summary 76.22 7,769,646
091102_HL021 Tracking FBase Summary Failed Failed
091110_HL022 Tracking - Summary 68.03 5,161,713
091113_HL023 Tracking FBase Summary 80.97 7,083,662
091119_HL024 Tracking FBase Summary 82.8 5,046,487
091123_HL025 Tracking FBase Summary 68.39 5,727,128
091127_HL026 Tracking FBase Summary 82.27 7,045,934
091202_HL027 Tracking FBase Summary 82.46 6,017,845
091206_HL028 Tracking FBase Summary 55.12 3,446,764
091208_HL029 Tracking FBase Summary 72.26 6,151,726
091212_AL005 Tracking - Summary 9.94 505,765
091217_AL006 Tracking FBase Summary 74.95 6566654
091217_AL007 Tracking FBase Summary 35.92 2638947
091217_AL008 Tracking FBase Summary 27.76 2,197,558(failed, overloaded, focusing laser)
091229_HL030 Tracking FBase Summary 84.94 6,385,095