Athurva Gore/LabNotes/2009-8-19: Difference between revisions
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** FLYDUP5279 is still running on genome-tech | ** FLYDUP5279 is still running on genome-tech | ||
* More details on each probeset will be added shortly | * More details on each probeset will be added shortly | ||
=Analyzing False Positives= | |||
* G-A bias? Check, Rob noticed it in his data | |||
=IPS and Cancer= | |||
=Classifying SNPs= | |||
* Can we remove false positives with an algorithm? |
Revision as of 20:39, 19 August 2009
Probeset Upload
- 18 bp SNP ProbeSet (cDNA version)
- Dr. Lee Probesets (18 bp SNP, cDNA)
- Baylor Probesets
- http://genome-tech.ucsd.edu/LabNotes/upload/5/50/PROBESET_Baylor_RPLCACRD_output_final.txt
- http://genome-tech.ucsd.edu/LabNotes/index.php/Image:PROBESET_Baylor_KKESH72_output_final.txt
- http://genome-tech.ucsd.edu/LabNotes/upload/1/1b/PROBESET_Baylor_FlyDup936_output_final.txt
- http://genome-tech.ucsd.edu/LabNotes/upload/9/9d/PROBESET_Baylor_FlyDup901_output_final.txt
- FLYDUP5279 is still running on genome-tech
- More details on each probeset will be added shortly
Analyzing False Positives
- G-A bias? Check, Rob noticed it in his data
IPS and Cancer
Classifying SNPs
- Can we remove false positives with an algorithm?