Chris Wei: Difference between revisions
>Cjwei No edit summary |
>Cjwei No edit summary |
||
(38 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
*[[Chris:LabNotes/Microbiome|Microbiome | =Projects= | ||
*[[Chris:LabNotes/Microbiome|Lab Meeting Presentations]] | *[[Chris:LabNotes/Microbiome|Microbiome (2010-2013)]] | ||
*[[Chris:LabNotes/MIDAS|MIDAS (2013-2014)]] | |||
*[[Chris:LabNotes/Moleculo|Moleculo (2013-2014)]] | |||
*[[Chris:LabNotes/Hg19Haplotyping|Haplotyping (2014)]] | |||
*[[Chris:LabNotes/SeaMicrobiome|Sea Microbiome (2015)]] | |||
*[[Chris:LabNotes/FateMapping|Phylogenetic Fate Mapping (2014-16)]] | |||
*[[Chris:LabNotes/MSI|Microsatellite Instability (2016-2017)]] | |||
*[[Chris:LabNotes/MolecularBarcoding|Molecular Barcoding (2016)]] | |||
*[[Chris:LabNotes/sci-Methyl_Seq|sci-Methyl_Seq (2017)]] | |||
=General Protocols= | |||
[[Media:chris_protocol_Bead_Purification.docx| Bead Purification]] | |||
[[Media:chris_protocol_Ethanol_Precipitation.docx| Ethanol Precipitation]] | |||
[[Media:chris_protocol_Qubit_Quantification_Protocol.docx| QUBIT Quantification]] | |||
[[Media:chris_protocol_Pacbio_Library_Construction_Protocol_Updated.docx| Pacbio Library Construction]] | |||
[[Chris:LabNotes/General_Protocols/BaseCalling_Procedure|Illumina Demultiplexing]] | |||
[[Chris:LabNotes/General_Protocols/genome-miner_restart|Genome-miner Restart/Mount]] | |||
[[Chris:LabNotes/General_Protocols/Electroporation|E. coli Electroporation]] | |||
=Lab Meeting Presentations= | |||
[[Media:De_novo_sequencing_of_the_microbial_genome_Lab_Meeting_Presentation.pdf|Lab Meeting 8/11/2010]] | |||
Progress Report: Microbial Genome Project | |||
[[Media:One_Bacteria_Cell,_One_Complete_Genome_Presentation.pdf| Lab Meeting 9/19/2010]] | |||
Journal Club: One Bacteria Cell, One Complete Genome | |||
[[Media:chris_Lab_Meeting_2_25_2011.pdf| Lab Meeting 2/25/2011]] | |||
Progress Report: Limited MDA | |||
[[Media:3_4_2011_Metagenomic_Discovery_of_Biomass-Degrading_Genes_and_Genomes_from_Cow_Rumen_Presentation.pptx| Lab Meeting 3/4/2011]] | |||
Journal Club: Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen | |||
[[Media:Chris_Progress_Report_5_25_2011.pptx| Lab Meeting 5/25/2011]] | |||
Progress Report: Sequence Binning and Slide Cut | |||
[[Media:Chris_Journal_Club_6_3_2011.pptx| Lab Meeting 6/3/2011]] | |||
Journal Club: Genome of a Low-Salinity Ammonia-Oxidizing Archaeon Determined by Single-Cell and Metagenomic Analysis | |||
[[Media:Chris_Wei_Journal_Club_1_23_2012.pptx| Lab Meeting 1/23/2012]] | |||
Journal Club: Digital MDA for enumeration of total nucleic acid contamination | |||
[[Media:Chris_Wei_Progress_Update_4_11_2012.pptx| Lab Meeting 4/11/2012]] | |||
Progress Report: Single Cell + Metagenomics Hybrid Assembly | |||
[[Media:chris_Lab_Meeting_5_30_2012.pptx| Lab Meeting 5/30/2012]] | |||
Progress Report: Pacbio Sequencing | |||
[[Media:chris_Lab_Meeting_6_18_2013.pptx| Lab Meeting 6/18/2013]] | |||
Progress Report: Moleculo Sequencing | |||
[[Media:chris_Illumina_Meeting_8_9_2013.pptx| Illumina Meeting 8/9/2013]] | |||
Update on Oncomelania Moleculo Sequencing | |||
[[Media:chris_Lab_Meeting_9_3_2013.pptx| Lab Meeting 9/3/2013]] | |||
Progress Report: Moleculo Sequencing | |||
[[Media:chris_Lab_Meeting_11_21_2013.pdf| Lab Meeting 11/21/2013]] | |||
Progress Report: South Pacific Gyre Bacteria | |||
[[Media:chris_Lab_Meeting_01_14_2014.pptx| Lab Meeting 1/14/2014]] | |||
Progress Report: Moleculo Sequencing | |||
[[Media:cw_Lab_Meeting_2_7_2014_Malaria_Single_Cell_Isolation.pptx| Meeting with Winzeler Lab 2/27/2014]] | |||
Progress Report: Malaria Single Cell Identification | |||
[[Media:cw_Lab_Meeting_03_03_2014.pptx| Lab Meeting 3/3/2014]] | |||
Progress Report: Malaria Single Cell Identification | |||
[[Media:cw_Lab_Meeting_05_01_2014_Phylogenetic_Fate_Mapping.pdf | Lab Meeting 5/1/2014]] | |||
Progress Report: Phylogenetic Fate Mapping | |||
[[Media:cw_2014_07_01_Lab_Meeting_Phylogenetic_Fate_Mapping_Update.pptx | Lab Meeting 7/1/2014]] | |||
Progress Report: Phylogenetic Fate Mapping Update | |||
[[Media:cw_2014_08_26_Lab_Meeting_Phylogenetic_Fate_Mapping_Update.pptx | Lab Meeting 8/26/2014]] | |||
Progress Report: Phylogenetic Fate Mapping Update | |||
[[Media:2014_10_20_Lab_Meeting_Phylogenetic_Fate_Mapping_Update.pptx | Lab Meeting 10/20/2014]] | |||
Progress Report: Phylogenetic Fate Mapping Update | |||
[[Media:cw_2015_01_30_Lab_Meeting_Phylogenetic_Fate_Mapping_Update.pptx | Lab Meeting 1/30/2015]] | |||
Progress Report: Phylogenetic Fate Mapping Update | |||
[[Media:cw_2015_03_15_Lab_Meeting_Phylogenetic_Fate_Mapping.pptx | Lab Meeting 3/15/2015]] | |||
Progress Report: Phylogenetic Fate Mapping Update |
Latest revision as of 20:52, 21 April 2017
Projects[edit]
- Microbiome (2010-2013)
- MIDAS (2013-2014)
- Moleculo (2013-2014)
- Haplotyping (2014)
- Sea Microbiome (2015)
- Phylogenetic Fate Mapping (2014-16)
- Microsatellite Instability (2016-2017)
- Molecular Barcoding (2016)
- sci-Methyl_Seq (2017)
General Protocols[edit]
Lab Meeting Presentations[edit]
Lab Meeting 8/11/2010 Progress Report: Microbial Genome Project
Lab Meeting 9/19/2010 Journal Club: One Bacteria Cell, One Complete Genome
Lab Meeting 2/25/2011 Progress Report: Limited MDA
Lab Meeting 3/4/2011 Journal Club: Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen
Lab Meeting 5/25/2011 Progress Report: Sequence Binning and Slide Cut
Lab Meeting 6/3/2011 Journal Club: Genome of a Low-Salinity Ammonia-Oxidizing Archaeon Determined by Single-Cell and Metagenomic Analysis
Lab Meeting 1/23/2012 Journal Club: Digital MDA for enumeration of total nucleic acid contamination
Lab Meeting 4/11/2012 Progress Report: Single Cell + Metagenomics Hybrid Assembly
Lab Meeting 5/30/2012 Progress Report: Pacbio Sequencing
Lab Meeting 6/18/2013 Progress Report: Moleculo Sequencing
Illumina Meeting 8/9/2013 Update on Oncomelania Moleculo Sequencing
Lab Meeting 9/3/2013 Progress Report: Moleculo Sequencing
Lab Meeting 11/21/2013 Progress Report: South Pacific Gyre Bacteria
Lab Meeting 1/14/2014 Progress Report: Moleculo Sequencing
Meeting with Winzeler Lab 2/27/2014 Progress Report: Malaria Single Cell Identification
Lab Meeting 3/3/2014 Progress Report: Malaria Single Cell Identification
Lab Meeting 5/1/2014 Progress Report: Phylogenetic Fate Mapping
Lab Meeting 7/1/2014 Progress Report: Phylogenetic Fate Mapping Update
Lab Meeting 8/26/2014 Progress Report: Phylogenetic Fate Mapping Update
Lab Meeting 10/20/2014 Progress Report: Phylogenetic Fate Mapping Update
Lab Meeting 1/30/2015 Progress Report: Phylogenetic Fate Mapping Update
Lab Meeting 3/15/2015 Progress Report: Phylogenetic Fate Mapping Update