Kun:LabNotes/GenomeSeq: Difference between revisions

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**Library constructions:[[Kun:LabNotes/GenomeSeq/2010-8-20|Exp #1]],[[Kun:LabNotes/GenomeSeq/2010-8-26|Exp #2]],[[Kun:LabNotes/GenomeSeq/2010-8-27|Exp #3]],[[Kun:LabNotes/GenomeSeq/2010-9-4|Exp #4]],[[Kun:LabNotes/GenomeSeq/2010-9-9|Exp #5]],[[Kun:LabNotes/GenomeSeq/2010-9-10|Exp #6]]
**Library constructions:[[Kun:LabNotes/GenomeSeq/2010-8-20|Exp #1]],[[Kun:LabNotes/GenomeSeq/2010-8-26|Exp #2]],[[Kun:LabNotes/GenomeSeq/2010-8-27|Exp #3]],[[Kun:LabNotes/GenomeSeq/2010-9-4|Exp #4]],[[Kun:LabNotes/GenomeSeq/2010-9-9|Exp #5]],[[Kun:LabNotes/GenomeSeq/2010-9-10|Exp #6]]
**Data analysis:
**Data analysis:
***De novo genome assembling: assemble each species or each fish?
****SOAPdenovo: Error correction? K-mer size?
****Abyss: worth trying?

Revision as of 01:18, 6 October 2010

2010 <calendar> name=Kun:LabNotes/GenomeSeq format=%name/%year-%month-%day date=2010/10/01 </calendar>

Project Threads

  • Lancelet genome sequencing.
    • Library constructions:Exp #1,Exp #2,Exp #3,Exp #4,Exp #5,Exp #6
    • Data analysis:
      • De novo genome assembling: assemble each species or each fish?
        • SOAPdenovo: Error correction? K-mer size?
        • Abyss: worth trying?