Rui:Haplotying: Difference between revisions

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==Progress==
===Sequencing analysis===
* Dr. Zhang's link on haplotyping analysis [http://genome-tech.ucsd.edu/LabNotes/index.php/Kun:LabNotes/Haplotyping]


* HL095: [http://genome-tech.ucsd.edu/LabNotes/index.php/Kun:LabNotes/Haplotyping/2011-6-14]
* HL101: [http://genome-tech.ucsd.edu/LabNotes/index.php/Kun:LabNotes/Haplotyping/2011-9-7]
* HL108: [http://genome-tech.ucsd.edu/LabNotes/index.php/Rui:Hap_analysis_on_HL108]
===Notes===
* "Methylation haplotyping on few cells" project: May 27th email [http://genome-tech.ucsd.edu/LabNotes/index.php/Kun:LabNotes/Haplotyping/2011-5-12]
* Human gDNA samples: Kun's stack - the box at the left up corner (-20C), Rui's box (4C) with GC DNA and Africa's DNA.
* Prepare ABD mixture: 9 mL 40% acrylamide, 1 ml Acrylamide/Bis (19:1), 200 mg DATD in 15 mL tube. Shake to dissolve DATD. Use a 3 cc syringe and .22 um filter to 1 mL of ABD into 1.5 mL tube. The rest can be saved at 4C for 1 week
==Protocol==
==Primers==
[[File:Primers for Tn-based-haplotyping.xls]]
==2011==
<calendar>
name=Rui:LabNotes/Haplotyping
format=%name/%year-%month-%day
date=2011/10/1
view=oneyear
</calendar>

Latest revision as of 00:56, 7 December 2011