Rui:Data Analysis: Difference between revisions

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>RuiLiu
(Created page with '==Examples== Jeff's samples: Kun:LabNotes/Haplotyping/2010-9-17 [http://genome-tech.ucsd.edu/LabNotes/index.php/Kun:LabNotes/Haplotyping/2010-9-17] Transcriptome: Kun:LabNot…')
 
>RuiLiu
Line 11: Line 11:
  Kun:LabNotes/Haplotyping/2011-6-14
  Kun:LabNotes/Haplotyping/2011-6-14
[http://genome-tech.ucsd.edu/LabNotes/index.php/Kun:LabNotes/Haplotyping/2011-6-14]
[http://genome-tech.ucsd.edu/LabNotes/index.php/Kun:LabNotes/Haplotyping/2011-6-14]
==Haplotyping 6.21.11==
===Data===
ruiliu@genome-miner:~$ cd /home/kunzhang/haplotyping/Data/HL095/
ruiliu@genome-miner:/home/kunzhang/haplotyping/Data/HL095$ ls -l s_4_Indx1.*
-rw-r--r-- 1 kunzhang kunzhang 114237942 2011-06-13 22:07 s_4_Indx1.bowtie.pileup
-rw-r--r-- 1 kunzhang kunzhang  39977658 2011-06-13 21:28 s_4_Indx1.bowtie.sorted.bam
-rw-r--r-- 1 kunzhang kunzhang  4442210 2011-06-13 22:05 s_4_Indx1.bowtie.sorted.unique.bam
-rw-r--r-- 1 kunzhang kunzhang      278 2011-06-13 21:29 s_4_Indx1.bowtie.variants.txt
-rw-r--r-- 1 kunzhang kunzhang      7103 2011-06-14 15:58 s_4_Indx1.hapCompare.txt
-rw-r--r-- 1 kunzhang kunzhang      9399 2011-06-14 16:56 s_4_Indx1.idioGraph.txt
-rw-r--r-- 1 kunzhang kunzhang    675115 2011-06-13 21:29 s_4_Indx1.log
-rw-r--r-- 1 kunzhang kunzhang 273522562 2011-06-13 18:08 s_4_Indx1.txt

Revision as of 22:18, 22 June 2011

Examples

Jeff's samples:
Kun:LabNotes/Haplotyping/2010-9-17

[1]

Transcriptome:
Kun:LabNotes/SingleCellExpr/2011-6-13

[2]

Haplotyping:
Kun:LabNotes/Haplotyping/2011-6-14

[3]

Haplotyping 6.21.11

Data

ruiliu@genome-miner:~$ cd /home/kunzhang/haplotyping/Data/HL095/

ruiliu@genome-miner:/home/kunzhang/haplotyping/Data/HL095$ ls -l s_4_Indx1.* -rw-r--r-- 1 kunzhang kunzhang 114237942 2011-06-13 22:07 s_4_Indx1.bowtie.pileup -rw-r--r-- 1 kunzhang kunzhang 39977658 2011-06-13 21:28 s_4_Indx1.bowtie.sorted.bam -rw-r--r-- 1 kunzhang kunzhang 4442210 2011-06-13 22:05 s_4_Indx1.bowtie.sorted.unique.bam -rw-r--r-- 1 kunzhang kunzhang 278 2011-06-13 21:29 s_4_Indx1.bowtie.variants.txt -rw-r--r-- 1 kunzhang kunzhang 7103 2011-06-14 15:58 s_4_Indx1.hapCompare.txt -rw-r--r-- 1 kunzhang kunzhang 9399 2011-06-14 16:56 s_4_Indx1.idioGraph.txt -rw-r--r-- 1 kunzhang kunzhang 675115 2011-06-13 21:29 s_4_Indx1.log -rw-r--r-- 1 kunzhang kunzhang 273522562 2011-06-13 18:08 s_4_Indx1.txt