Rui:Data Analysis: Difference between revisions

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>RuiLiu
>RuiLiu
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*[[Rui:DNAseq analysis on HL118|DNAseq analysis on HL118]]
*[[Rui:DNAseq analysis on HL118|DNAseq analysis on HL118]]
*[[Rui:totoRNAseq on 121226_HL140|totoRNAseq on 121226_HL140]]
*[[Rui:totoRNAseq on 121226_HL140|totoRNAseq on 121226_HL140]]
*[[Rui:totoRNAseq on 130120_HL141|totoRNAseq on 130120_HL141]]


==RNAseq analysis key notes==
==RNAseq analysis key notes==

Revision as of 00:07, 26 January 2013

Examples

Jeff's samples:
Kun:LabNotes/Haplotyping/2010-9-17 [1]
Transcriptome:
Kun:LabNotes/SingleCellExpr/2011-6-13 [2]
Haplotyping:
Kun:LabNotes/Haplotyping/2011-6-14 [3]

Data analysis

RNAseq analysis key notes

  • iGenome packages [4]
  1. UCSC genome package: [5]
  2. Ensemble genome package: [6]
  • Comparison of RNAseq analysis programs: [7]