Noi/NOTES/2011-9-16: Difference between revisions
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= | = BSPP DMR330k capture of samples from Sergio, two largest pedigrees from HAPMAPPT01, ten replicates, two HFF somatic lines, and comparing DNA methylation kit from Zymoresearch and Sigma = | ||
* ''Total number of reactions = 39 reactions''' | * ''Total number of reactions = 39 reactions''' | ||
** '''9 samples from Sergio''' | ** '''9 samples from Sergio''' |
Revision as of 01:05, 16 September 2011
BSPP DMR330k capture of samples from Sergio, two largest pedigrees from HAPMAPPT01, ten replicates, two HFF somatic lines, and comparing DNA methylation kit from Zymoresearch and Sigma
- Total number of reactions = 39 reactions'
- 9 samples from Sergio
- 12 samples from 2 largest pedigrees of HAPMAPPT01
- Family 1362
- GM11995 (wellID G7)
- GM11993 (wellID F2)
- GM10861 (wellID A9)
- GM11992 (wellID C2 )
- GM11994 (wellID G9 )
- GM10860 (wellID F10)
- Family 1454
- GM12813 (wellID E8)
- GM12802 (wellID E7)
- GM12815 (wellID G12)
- GM12812 (wellID F11)
- GM12814 (wellID A7)
- GM12801 (wellID D9)
- Family 1362
- 10 replicates
- NA12156 (HAPMAPPT01)
- 2 somatic lines
- 2HFF P6
- 218 HFF P7
- 4 samples from Penn (repeat the low QC value samples from the first batch)
- 2 reactions to compare bis-cvt gDNA quality processed by two different DNA methylation kits, Zymoresearch (DNA methylation gold kit) and Sigma (Imprint DNA modification kit)
- PGP1iPS
- Note For the gDNA of HAPMAPPT01, aliquot 10 ug to each of two working plates and save the original plate