Noi/NOTES/2012-4-26: Difference between revisions
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== mQTL analysis on UCLA-SZ data set (no CpG-SNP) == | == mQTL analysis on UCLA-SZ data set (no CpG-SNP) == | ||
* Details will be filled later | * Details will be filled later | ||
* Note: P-value of 10%FDR is p <= 1.636E−4 | * Note: P-value of 10%FDR is '''p <= 1.636E−4''' | ||
{| {{table}} | {| {{table}} | ||
| align="center" style="background:#f0f0f0;"|'''Associated CpG-SNP distance''' | | align="center" style="background:#f0f0f0;"|'''Associated CpG-SNP distance''' |
Revision as of 16:51, 26 April 2012
mQTL analysis on UCLA-SZ data set (no CpG-SNP)
- Details will be filled later
- Note: P-value of 10%FDR is p <= 1.636E−4
Associated CpG-SNP distance | Number of assiciated CpG-SNP | % |
10%FDR_10kb | 378 | 50.94 |
10%FDR_10-20kb | 27 | 3.64 |
10%FDR_20-30kb | 21 | 2.83 |
10%FDR_30-40kb | 36 | 4.85 |
10%FDR_40-50kb | 2 | 0.27 |
10%FDR_50kb-2Mb | 278 | 37.47 |
Total in 2Mb | 742 |
Associated CpG-SNP distance | Number of assiciated CpG-SNP | % |
minpval0.05_10kb | 862 | 13.43 |
minpval0.05_10-20kb | 124 | 1.93 |
minpval0.05_20-30kb | 133 | 2.07 |
minpval0.05_30-40kb | 108 | 1.68 |
minpval0.05_40-50kb | 75 | 1.17 |
minpval0.05_50kb-2Mb | 5,116 | 79.71 |
Total in 2Mb | 6,418 |