Noi/NOTES/2012-4-26: Difference between revisions

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== mQTL analysis on UCLA-SZ data set (no CpG-SNP) ==
== mQTL analysis on UCLA-SZ data set (no CpG-SNP) ==
* Details will be filled later
* Details will be filled later
* Note: P-value of 10%FDR is p <= 1.636E−4
* Note: P-value of 10%FDR is '''p <= 1.636E−4'''
{| {{table}}
{| {{table}}
| align="center" style="background:#f0f0f0;"|'''Associated  CpG-SNP distance'''
| align="center" style="background:#f0f0f0;"|'''Associated  CpG-SNP distance'''

Revision as of 16:51, 26 April 2012

mQTL analysis on UCLA-SZ data set (no CpG-SNP)

  • Details will be filled later
  • Note: P-value of 10%FDR is p <= 1.636E−4
Associated CpG-SNP distance Number of assiciated CpG-SNP %
10%FDR_10kb 378 50.94
10%FDR_10-20kb 27 3.64
10%FDR_20-30kb 21 2.83
10%FDR_30-40kb 36 4.85
10%FDR_40-50kb 2 0.27
10%FDR_50kb-2Mb 278 37.47
Total in 2Mb 742
Associated CpG-SNP distance Number of assiciated CpG-SNP %
minpval0.05_10kb 862 13.43
minpval0.05_10-20kb 124 1.93
minpval0.05_20-30kb 133 2.07
minpval0.05_30-40kb 108 1.68
minpval0.05_40-50kb 75 1.17
minpval0.05_50kb-2Mb 5,116 79.71
Total in 2Mb 6,418