Matthew Cai: Difference between revisions
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==Notebook== | ==Notebook== | ||
=== | === 2014 === | ||
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name=Matt | name=Matt | ||
format=%name:LabNotes/%year-%month-%day | format=%name:LabNotes/%year-%month-%day | ||
date= | date=2014/01/01 | ||
view=oneyear | view=oneyear | ||
</calendar> | </calendar> | ||
=== 2013 === | |||
=== | |||
<calendar> | <calendar> | ||
name=Matt | name=Matt | ||
format=%name:LabNotes/%year-%month-%day | format=%name:LabNotes/%year-%month-%day | ||
date= | date=2013/01/01 | ||
view=oneyear | view=oneyear | ||
</calendar> | </calendar> |
Revision as of 21:28, 14 May 2014
Projects
in Situ Sequencing
- Padlock Probe Design
- Probe Production and Capture
- CA12k Capture (MiSeq_130325) Analysis
- CA12k End Sequencing (HL152_130524) Analysis
- Agi26k End Sequencing (HL155_130628) Analysis
- Quantifying Errors in CA12k and Agi26k Oligo Pools
Notebook
2014
<calendar> name=Matt format=%name:LabNotes/%year-%month-%day date=2014/01/01 view=oneyear </calendar>
2013
<calendar> name=Matt format=%name:LabNotes/%year-%month-%day date=2013/01/01 view=oneyear </calendar>
Protocols
Sequencing Runs
130325_MiSeq: CA12k capture of gDNA, cDNAwRNase, and cDNA-RNase
130524_HL152 (Lane 2, unassigned): CA12k oligos
130628_HL155 (Lane 3, Indx 10 & 12): Agi26k_0gap and Agi26k_20gap oligos
130729_MiSeq: Agi26k_0gap and Agi26k_20gap capture of gDNA and cDNA
Probe Sets
CA12k: 12,355 probes (170nt)
Agi26k_0gap: 12,964 probes (193nt)
Agi26k_20gap: 13,179 probes (193nt)