Daniel:Notebook/HiResChrPaint: Difference between revisions

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[[Daniel Jacobsen|Back to Notebook]]
[[Daniel Jacobsen|Back to Notebook]]
<calendar>
name=Daniel:Notebook/HiResChrPaint
format=%name/%year-%month-%day
date=2014/02/01
view=oneyear
</calendar>
<calendar>
<calendar>
name=Daniel:Notebook/HiResChrPaint
name=Daniel:Notebook/HiResChrPaint

Revision as of 23:34, 7 January 2014

High Resolution Chromosome Painting Project

Back to Notebook

<calendar> name=Daniel:Notebook/HiResChrPaint format=%name/%year-%month-%day date=2014/02/01 view=oneyear </calendar>

<calendar> name=Daniel:Notebook/HiResChrPaint format=%name/%year-%month-%day date=2013/02/01 view=oneyear </calendar>

Probe Design

For detailed analysis on probe design, see Dr. Zhang's wiki: Probe Design

The table below summarizes the first two probe sets, V4 and V6 (adapted from Dr. Zhang's notebook):

                                V6(#probes)  V4(#probes)
  19,518 Feb2012_80k_set_1.txt     16559       2959
  20,000 Feb2012_80k_set_2.txt     16400       3600
  18,850 Feb2012_80k_set_3.txt     13000       5850
  19,301 Feb2012_80k_set_4.txt     13314       5987

or

  V6 V4
Set 1 16559 2959
Set 2 16400 3600
Set 3 13000 5850
Set 4 13314 5987
total probes 59273 18396
total bp (102/probe, in millions) 6.05 1.88