Daniel:Notebook/GenomeMiner/2013-8-13: Difference between revisions
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Continuing Matt's pipeline. Looking over the perl script. | Continuing Matt's pipeline. Looking over the perl script. | ||
I believe I fixed the perl script: [[File:]] | I believe I fixed the perl script (uses my notation): [[File:Count_mismatch.txt]] | ||
===Results=== | ===Results=== |
Revision as of 18:04, 13 August 2013
HL155
Continuing Matt's pipeline. Looking over the perl script.
I believe I fixed the perl script (uses my notation): File:Count mismatch.txt
Results
Error Rate: 0.0208727984165367
Total reads | Filtered reads | Perfect match | 1 ins/del | 1 sub | 2 ins/del | 2 sub | 1 ins/del & 1 sub | 3+ | |
Number | 20727275 | 15082383 | 4411040 | 3584377 | 2417322 | 1893421 | 754110 | 1647242 | 374871 |
Percent | 100 | 72.77 | 21.28 | 17.29 | 11.66 | 9.13 | 3.64 | 7.95 | 1.81 |