Kun:LabNotes/MONOD: Difference between revisions
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==Optimization thread== | |||
*[[Kun:LabNotes/MONOD/2013-11-22|Round 1]]: GBM/PC (short and long inserts, N6 UMI) | |||
*[[Kun:LabNotes/MONOD/2014-1-17|Round 2]]: GBM/PC + placenta (short inserts, N8 UMI) | |||
*[[Kun:LabNotes/MONOD/2014-3-18|Round 3]]: GBM/PC/LC + placenta (short inserts, N8 UMI, non-repetitive) | |||
*[[Kun:LabNotes/MONOD/2014-5-12|Round 4]]: selecting the best probes from Round 1&3 | |||
*[[Kun:LabNotes/MONOD/2014-8-4|Round 5]]: screening of all Blood LMS clusters | |||
*[[Kun:LabNotes/MONOD/2015-7-16|Round 6]]: Selected probes from Round 1&3, plus additional targets from different sources. | |||
==Summary of data== | |||
*BSPP | |||
#Round 1: [[Kun:LabNotes/MONOD/2013-11-22]] | |||
#Round 2: [[Kun:LabNotes/MONOD/2014-1-17]] | |||
#Round 3: [[Kun:LabNotes/MONOD/2014-3-18]], [[Kun:LabNotes/MONOD/2014-5-13]] | |||
#Round 4(aka V1N3): [[Kun:LabNotes/MONOD/2014-5-12]], [[Kun:LabNotes/MONOD/2014-6-16]] | |||
#Round 5: [[Kun:LabNotes/MONOD/2014-8-4]] | |||
#Round 6: [[Kun:LabNotes/MONOD/2015-7-16]], [[Kun:LabNotes/MONOD/2014-10-1]] | |||
*RRBS | |||
#[[Kun:LabNotes/MONOD/2014-7-6]] | |||
#[[Kun:LabNotes/MONOD/2014-8-12]] | |||
*Nimblegen capture | |||
#Target selection: [[Kun:LabNotes/MONOD/2014-8-27]] | |||
#[[Kun:LabNotes/MONOD/2014-11-22]] | |||
#[[Kun:LabNotes/MONOD/2015-1-9]] | |||
#[[Kun:LabNotes/MONOD/2015-3-4]] | |||
#[[Kun:LabNotes/MONOD/2015-3-11]] | |||
#[[Kun:LabNotes/MONOD/2015-7-6]] | |||
==Daily notes== | |||
2015 | |||
<calendar> | |||
name=Kun:LabNotes/MONOD | |||
format=%name/%year-%month-%day | |||
date=2015/10/01 | |||
</calendar> | |||
2014 | 2014 | ||
<calendar> | <calendar> |
Latest revision as of 21:53, 23 February 2017
Optimization thread[edit]
- Round 1: GBM/PC (short and long inserts, N6 UMI)
- Round 2: GBM/PC + placenta (short inserts, N8 UMI)
- Round 3: GBM/PC/LC + placenta (short inserts, N8 UMI, non-repetitive)
- Round 4: selecting the best probes from Round 1&3
- Round 5: screening of all Blood LMS clusters
- Round 6: Selected probes from Round 1&3, plus additional targets from different sources.
Summary of data[edit]
- BSPP
- Round 1: Kun:LabNotes/MONOD/2013-11-22
- Round 2: Kun:LabNotes/MONOD/2014-1-17
- Round 3: Kun:LabNotes/MONOD/2014-3-18, Kun:LabNotes/MONOD/2014-5-13
- Round 4(aka V1N3): Kun:LabNotes/MONOD/2014-5-12, Kun:LabNotes/MONOD/2014-6-16
- Round 5: Kun:LabNotes/MONOD/2014-8-4
- Round 6: Kun:LabNotes/MONOD/2015-7-16, Kun:LabNotes/MONOD/2014-10-1
- RRBS
- Nimblegen capture
- Target selection: Kun:LabNotes/MONOD/2014-8-27
- Kun:LabNotes/MONOD/2014-11-22
- Kun:LabNotes/MONOD/2015-1-9
- Kun:LabNotes/MONOD/2015-3-4
- Kun:LabNotes/MONOD/2015-3-11
Daily notes[edit]
2015 <calendar> name=Kun:LabNotes/MONOD format=%name/%year-%month-%day date=2015/10/01 </calendar>
2014 <calendar> name=Kun:LabNotes/MONOD format=%name/%year-%month-%day date=2014/10/01 </calendar>
2013 <calendar> name=Kun:LabNotes/MONOD format=%name/%year-%month-%day date=2013/10/01 </calendar>