Daniel:Notebook/HiResChrPaint/2014-6-24: Difference between revisions
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Well, it started [[Daniel:Notebook/HiResChrPaint/2014-6-20|Friday]], but at some point over the weekend my probe mining finished. There are 2 GB of 60 bp oligos, amounting to approximately 40k potential sequences. Now I should be able to run Oligopaints scripts on them in order to generate probe files of the desired sequences/properties. | Well, it started [[Daniel:Notebook/HiResChrPaint/2014-6-20|Friday]], but at some point over the weekend my probe mining finished. There are 2 GB of 60 bp oligos, amounting to approximately 40k potential sequences. Now I should be able to run Oligopaints scripts on them in order to generate probe files of the desired sequences/properties. | ||
#Clean oligo.txt file to make it into a bed file | |||
##python ../../Probe_Design/bin/clean_file.py |
Revision as of 22:24, 24 June 2014
Probe Design (Started 06/17/2014)
Probe Mining
Well, it started Friday, but at some point over the weekend my probe mining finished. There are 2 GB of 60 bp oligos, amounting to approximately 40k potential sequences. Now I should be able to run Oligopaints scripts on them in order to generate probe files of the desired sequences/properties.
- Clean oligo.txt file to make it into a bed file
- python ../../Probe_Design/bin/clean_file.py