Blue:RNA-Seq Analyses:C1 hNuc 1000 Dataset: Difference between revisions

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*C1 Run Summary:
*C1 Run Summary:
[[File:20chips_Samplelist.png|400px]]
[[File:1000hNucBA8.jpg|1200px]]
*Primary Mapping/Analysis done by [[Rui:LabNotes/SingleCell/2014-7-3 Rui]] using our pipeline  
*Primary Mapping/Analysis done by [http://genome-tech.ucsd.edu/LabNotes/index.php/Rui:LabNotes/SingleCell/2014-7-3#Primary_analysis_on_20_chips_of_hNuc_BA8 Rui] using our pipeline  
*More in depth analysis by [[Rui:LabNotes/SingleCell/2014-7-4 Rui]]
*More in depth analysis by [http://genome-tech.ucsd.edu/LabNotes/index.php/Rui:LabNotes/SingleCell/2014-7-4 Rui]


==Analyses==


==Average cDNA Yields Across Runs==
[[Blue:RNA-Seq Analyses:C1 hNuc 1000 Dataset: Protocol Optimizations]]


[[File:20_C1_Runs_cDNA_Yields_2.png | 500px]]
[[Blue:RNA-Seq Analyses:C1 hNuc 1000 Dataset: Layer Specific Gene Expression]]

Latest revision as of 01:05, 8 November 2014

Overview[edit]

  • C1 Run Summary:

File:1000hNucBA8.jpg

  • Primary Mapping/Analysis done by Rui using our pipeline
  • More in depth analysis by Rui

Analyses[edit]

Blue:RNA-Seq Analyses:C1 hNuc 1000 Dataset: Protocol Optimizations

Blue:RNA-Seq Analyses:C1 hNuc 1000 Dataset: Layer Specific Gene Expression