Hosuk:LabNotes/2014-8-19: Difference between revisions
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====Analysis==== | ====Analysis==== | ||
*#Image aligning | =====Arrange data===== | ||
*File name (decided at imaging) : [Sample]_[Resolution]_[Step#]_[Pos#]_z##_ch##.tif | |||
**ex) PGP1F : PGP1F_Agi26k0gap_Decode_P20_S2_2014-08-09_20x_4k_Step1_Pos2_z01_ch01.tif | |||
**ex) Tissue section : HBTissue_2014-08-12_RCAagain_20x_4k_Pos1_z00_ch00.tif | |||
*Image aligning | |||
*#Shift, Crop | *#Shift, Crop | ||
*#Shift | *#Shift |
Revision as of 20:56, 22 August 2014
Decoding with Agi26k0gap Padlock Probe
Analysis
Arrange data
- File name (decided at imaging) : [Sample]_[Resolution]_[Step#]_[Pos#]_z##_ch##.tif
- ex) PGP1F : PGP1F_Agi26k0gap_Decode_P20_S2_2014-08-09_20x_4k_Step1_Pos2_z01_ch01.tif
- ex) Tissue section : HBTissue_2014-08-12_RCAagain_20x_4k_Pos1_z00_ch00.tif
- Image aligning
- Shift, Crop
- Shift
- BF
Result
- PGP1F_P20_S2_2014-08-09 --> , HBTissue_2014-08-12_S1