Shicheng Guo: Difference between revisions

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== MONOD Project==
== Scientific Project==
*[[Shicheng:MONOD|MONOD: Methylation Haplotyping for Non-invasive Diagnosis]]
*[[Shicheng:GMPOR|GMPOR: Genome-wide DNA methylation profile of reprogramming]]
*[[Shicheng:Twins|NASA twins project: Smoking influence to DNA methylation haplotype]]
*[[Shicheng:Deconvolution|IDRE: Integrate Deconvolution to RNA-seq and Epigenetics dataset]]
*[[Shicheng:To-do-List|To-Do-List]]


=== MONOD===
==Annotation and PublicData==
*[[Shicheng:Manuscript|Manuscript]]
*[[Shicheng:SALK2015-ROAD|Human Roadmap Epigenome Project]]
*[[Shicheng:Research_Follow|Research Result Follow ]]
*[[Shicheng:GEO_Methylation|GEO Methylation Microarray]]
*[[Shicheng:TCGA_Methylation|TCGA Methylation Dataset]]
*[[Shicheng:Encode_Methylation|ENCODE Epigenetics Project]]
*[[Shicheng:Zhang_UCSC|UCSC Track of Dr. Zhang's Lab]]
*[[Shicheng:Publication_collection|Publication Collection]]
*[[Shicheng:DennisLo2015-PNAS|DennisLo2015-PNAS]]
*[[Shicheng:Xliu2014GB|Xliu2014-GenomeBiology]]
*[[Shicheng:Heyn2016|Holger2016-GenomeBiology]]
*[[Shicheng:Holger2012|Holger2013-PNAS]]
*[[Shicheng:Ziller2013|Ziller2013-Nature]]
*[[Shicheng:Tang2016|Tang2016CellResearch]]
*[[Shicheng:LaSalle2012|LaSalle2012PNAS]]
*[[Shicheng:Pellegrini2015|Pellegrini2015]]
*[[Shicheng:Chen2016|Chen2016CellResearch]]
*[[Shicheng:David2016|David2016NatureCommunication]]
*[[Shicheng:Schroeder2013|Schroeder2013PNAS]]
*[[Shicheng:Kevin2014|Kevin2014GenomeBiology]]
*[[Shicheng:Yanhuang2010|Yanhuang2010]]
*[[Shicheng:Feinberg2017|Feinberg2017NG]]


=== Analysis===
==Codes and Pipeline==
*[[Shicheng:IT|Kun's IT Maintenance]]
*[[Shicheng:AnalysisPipeline|Genomic Data Analysis Pipeline]]
*[[Shicheng:BS-seq|BS-Squencing]]
*[[Shicheng:De-Convolution|De-Convolution]]
*[[Shicheng:GEO_Matric|Statistics and Metric]]
*[[Shicheng:GEO_Pipeline|GEO Methylation Meta-Analysis]]
*[[Shicheng:HEP_Pipeline|RRBS Methylation Analysis]]
*[[Shicheng:MHL_Calculate|Methylation Haplotype and Loading]]
*[[Shicheng:Public_tools|Public tools]]
*[[Shicheng:R_script|R Script and Figure]]
*[[Shicheng:Linux and Perl|Linux and Perl]]
*[[Shicheng:Cheat_sheet| Cheat Sheet]]
*[[Shicheng:Software_and_Analysis_Test| Software and Analysis Test]]
*[[Shicheng:Sequencing_Variance_Calling|Genome Sequencing and Variation Calling]]
*[[Shicheng:torque_PBS| Torque and PBS]]
*[[Shicheng:computational_time| Computational Time Estimation]]
*[[Shicheng:GREAT-BIOINFOR| BATCH mode of GREAT GO-ANALYSIS]]


=== Supplementary===
==Presentation and Poster==
*[[2015]]
*[[2016]]


==Annotation and Database==
== Daily Notebook==
<calendar>
name=Shicheng:Calendar
format=%name/NOTES/%year-%month-%day
date=2017/04/08
view=oneyear
</calendar>


==Codes and Pipeline==
<calendar>
name=Shicheng:Calendar
format=%name/NOTES/%year-%month-%day
date=2016/01/05
view=oneyear
</calendar>


== Daily Notebook==
<calendar>
<calendar>
name=Shicheng:Calendar
name=Shicheng:Calendar

Latest revision as of 00:04, 25 January 2017

Scientific Project[edit]

Annotation and PublicData[edit]

Codes and Pipeline[edit]

Presentation and Poster[edit]

Daily Notebook[edit]

<calendar> name=Shicheng:Calendar format=%name/NOTES/%year-%month-%day date=2017/04/08 view=oneyear </calendar>

<calendar> name=Shicheng:Calendar format=%name/NOTES/%year-%month-%day date=2016/01/05 view=oneyear </calendar>

<calendar> name=Shicheng:Calendar format=%name/NOTES/%year-%month-%day date=2015/04/08 view=oneyear </calendar>