Ns126:Encode Methylation: Difference between revisions
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==Background== | ==Background== | ||
1, Encode: http://genome.ucsc.edu/ENCODE/downloads.html | |||
2, Encode|RRBS1: http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeHaibMethylRrbs/ | |||
3, Encode|RRBS2: http://genome.ucsc.edu/cgi-bin/hgTrackUi?hgsid=437674359_aUhx08DjchWwtBjyCYv61EB7Yy8S&c=chr1&g=wgEncodeHaibMethylRrbs | |||
3, Encode|Methy450K: http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeHaibMethyl450/ | |||
4, Encode|software: https://www.encodeproject.org/software/ | |||
==Method== | ==Method== |
Revision as of 06:31, 1 August 2015
RRBS Data Analysis to Encode Project
Background
1, Encode: http://genome.ucsc.edu/ENCODE/downloads.html 2, Encode|RRBS1: http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeHaibMethylRrbs/ 3, Encode|RRBS2: http://genome.ucsc.edu/cgi-bin/hgTrackUi?hgsid=437674359_aUhx08DjchWwtBjyCYv61EB7Yy8S&c=chr1&g=wgEncodeHaibMethylRrbs 3, Encode|Methy450K: http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeHaibMethyl450/ 4, Encode|software: https://www.encodeproject.org/software/
Method
Data Download
Fastq and bed files can be downloaded from Encode Project. Files list can be downloaded here File:Rrbs.encode.files.txt.
101 RRBS were downloaded from [[]]