Sample record: Difference between revisions

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==Instruction==
{| {{table}}
*All of the sample records will have the following information:
| align="center" style="background:#f0f0f0;"|'''2009'''
 
| align="center" style="background:#f0f0f0;"|''''''
Month Date, Year (provide a link to the preparation of the samples)
| align="center" style="background:#f0f0f0;"|''''''
[name] prepared and sent out [x] tubes of [sample] to [where] through [mail carrier]
| align="center" style="background:#f0f0f0;"|''''''
[tube 1]: tube label, concentration, volume
| align="center" style="background:#f0f0f0;"|''''''
.
| align="center" style="background:#f0f0f0;"|''''''
.
| align="center" style="background:#f0f0f0;"|''''''
.
| align="center" style="background:#f0f0f0;"|''''''
[tube x]: tube label, concentration, volume
| align="center" style="background:#f0f0f0;"|''''''
 
|-
==Sample Record==
| Month||Date||Probe Set||tube label||conc. ; vol.||sequencing facility||prepared by||||
 
|-
===March 13, 2009===
| March||13||Exome||PGP1-CTRL||48.5ng/ul; 30ul||Billy Li (Harvard)||[[Alice:LabNotes/2009-3-13|Alice Li]]||||
[[Alice:LabNotes/2009-3-13|Alice Li]] prepared and sent out 2 tubes of Shotgun sequencing libraries to Dr.Billy Li through Fedex overnight.
|-
| March||13||Exome||PGP1-shaked||46ng/ul; 30ul||Billy Li (Harvard)||[[Alice:LabNotes/2009-3-13|Alice Li]]||||
[tube 1]: PGP1-CTRL, 48.5ng/ul, 30ul
|-
[tube 2]: PGP1-shaked, 46ng/ul, 30ul
| ||||||||||||||||
 
|-
===May 25, 2009===
| May||25||Exome||PGP1_052509a||77nM; 40ul||BioGem||[[Alice:LabNotes/2009-5-24|Alice Li]]||||
[[Alice:LabNotes/2009-5-24|Alice Li]] and [[Kun:LabNotes/ExonomeSeq/2009-5-23|Kun Zhang]] each prepared 4 tubes of Shotgun sequencing libraries.
|-
A total of 8 tubes of solexa sequencing libraries were sent to BioGem.
| May||25||Exome||PGP2_052509a||64nM; 40ul||BioGem||[[Alice:LabNotes/2009-5-24|Alice Li]]||||
|-
[tube 1]: PGP1_062509k,    19nM, 40ul
| May||25||Exome||PGP3_052509a||49.5nM; 40ul||BioGem||[[Alice:LabNotes/2009-5-24|Alice Li]]||||
[tube 2]: PGP2_062509k,    20nM, 40ul
|-
[tube 3]: PGP3_062509k,    19nM, 40ul
| May||25||Exome||NA12878_052509a||60nM; 40ul||BioGem||[[Alice:LabNotes/2009-5-24|Alice Li]]||||
[tube 4]: NA12878_062509k, 33nM, 40ul
|-
[tube 5]: PGP1_062509a,    77nM, 40ul
| May||25||Exome||PGP1_052509k||19nM, 40ul||BioGem||[[Kun:LabNotes/ExonomeSeq/2009-5-23|Kun Zhang]] ||||
[tube 6]: PGP2_062509a,    64nM, 40ul
|-
[tube 7]: PGP3_062509a,    49.5nM, 40ul
| May||25||Exome||PGP2_052509k||20nM, 40ul||BioGem||[[Kun:LabNotes/ExonomeSeq/2009-5-23|Kun Zhang]] ||||
[tube 8]: NA12878_062509a, 60nM, 40ul
|-
 
| May||25||Exome||PGP3_052509k||19nM, 40ul||BioGem||[[Kun:LabNotes/ExonomeSeq/2009-5-23|Kun Zhang]] ||||
===May 29, 2009===
|-
[[Alice:LabNotes/2009-5-29|Alice Li]] prepared and sent out 2 tubes of sample for end-sequencing to Gua Yuan through Fedex overnight.
| May||25||Exome||NA12878_052509k||33nM, 40ul||BioGem||[[Kun:LabNotes/ExonomeSeq/2009-5-23|Kun Zhang]] ||||
[tube 1]: PGP2_052909A, 111nM, 15ul
|-
[tube 2]: PGP3_052909A, 126nM, 15ul
| ||||||||||||||||
 
|-
===June 4, 2009===
| May||29||Exome||PGP2_052909A||111nM; 15ul||Guao Yuan||[[Alice:LabNotes/2009-5-29|Alice Li]]||||
[[Alice:LabNotes/2009-6-4|Alice Li]] prepared and sent out 4 tubes of Shotgun sequencing libraries to BioGem.
|-
[tube 1]: PGP5-1-060809, 62.5nM, 10ul, lane 4
| May||29||Exome||PGP3_052909A||126nM; 15ul||Guao Yuan||[[Alice:LabNotes/2009-5-29|Alice Li]]||||
[tube 2]: PGP5-2-060809, 65.7nM, 10ul, lane 5
|-
[tube 3]: PGP7-1-060809, 75.5nM, 10ul, lane 6
| ||||||||||||||||
[tube 4]: PGP7-2-060809, 79.7nM, 20ul, lane 7 and lane 8
|-
 
| June||4||Exome||PGP5-1-060809||62.5nM; 10ul||BioGem||[[Alice:LabNotes/2009-6-4|Alice Li]]||||
===June 10, 2009===
|-
[[Alice:LabNotes/2009-6-10|Alice Li]] prepared and sent out 4 tubes of Shotgun sequencing libraries to Zhen Ye.
| June||4||Exome||PGP5-2-060809||65.7nM; 10ul||BioGem||[[Alice:LabNotes/2009-6-4|Alice Li]]||||
[tube 1]: PGP1-3-061009: 34nM x 15ul, lane 1
|-
[tube 2]: PGP2-3-061009: 25nM x 15ul, lane 2
| June||4||Exome||PGP7-1-060809||75.5nM; 10ul||BioGem||[[Alice:LabNotes/2009-6-4|Alice Li]]||||
[tube 3]: PGP3-3-061009: 22nM x 15ul, lane 3
|-
[tube 4]: NA12878-3-061009: 22nM x 15ul, lane 4
| June||4||Exome||PGP7-2-060809||79.7nM; 20ul||BioGem||[[Alice:LabNotes/2009-6-4|Alice Li]]||||
 
|-
===June 18, 2009===
| ||||||||||||||||
[[Alice:LabNotes/2009-6-4|Alice Li]] prepared and sent out 4 tubes of Shotgun sequencing libraries to Zhen Ye.
|-
[tube 1]: PGP5-1-060809, 62.5nM, 5ul  
| June||10||Exome||PGP1-3-061009||34nM; 15ul||Zhen Ye||[[Alice:LabNotes/2009-6-10|Alice Li]]||||
[tube 2]: PGP5-2-060809, 65.7nM, 5ul
|-
[tube 3]: PGP7-1-060809, 75.5nM, 5ul
| June||10||Exome||PGP2-3-061009||25nM; 15ul||zhen Ye||[[Alice:LabNotes/2009-6-10|Alice Li]]||||
|-
| June||10||Exome||PGP3-3-061009||22nM; 15ul||Zhen Ye||[[Alice:LabNotes/2009-6-10|Alice Li]]||||
|-
| June||10||Exome||NA12878-3-061009||22nM; 15ul||Zhen Ye||[[Alice:LabNotes/2009-6-10|Alice Li]]||||
|-
| ||||||||||||||||
|-
| June||18||Exome||PGP5-1-060809||62.5nM; 5ul||Zhen Ye||[[Alice:LabNotes/2009-6-4|Alice Li]]||||
|-
| June||18||Exome||PGP5-2-060809||65.7nM; 5ul||Zhen Ye||[[Alice:LabNotes/2009-6-4|Alice Li]]||||
|-
| June||18||Exome||PGP7-1-060809||75.5nM; 5ul||Zhen Ye||[[Alice:LabNotes/2009-6-4|Alice Li]]||||
|-
|
|}

Revision as of 19:09, 29 June 2009

2009 ' ' ' ' ' ' ' '
Month Date Probe Set tube label conc. ; vol. sequencing facility prepared by
March 13 Exome PGP1-CTRL 48.5ng/ul; 30ul Billy Li (Harvard) Alice Li
March 13 Exome PGP1-shaked 46ng/ul; 30ul Billy Li (Harvard) Alice Li
May 25 Exome PGP1_052509a 77nM; 40ul BioGem Alice Li
May 25 Exome PGP2_052509a 64nM; 40ul BioGem Alice Li
May 25 Exome PGP3_052509a 49.5nM; 40ul BioGem Alice Li
May 25 Exome NA12878_052509a 60nM; 40ul BioGem Alice Li
May 25 Exome PGP1_052509k 19nM, 40ul BioGem Kun Zhang
May 25 Exome PGP2_052509k 20nM, 40ul BioGem Kun Zhang
May 25 Exome PGP3_052509k 19nM, 40ul BioGem Kun Zhang
May 25 Exome NA12878_052509k 33nM, 40ul BioGem Kun Zhang
May 29 Exome PGP2_052909A 111nM; 15ul Guao Yuan Alice Li
May 29 Exome PGP3_052909A 126nM; 15ul Guao Yuan Alice Li
June 4 Exome PGP5-1-060809 62.5nM; 10ul BioGem Alice Li
June 4 Exome PGP5-2-060809 65.7nM; 10ul BioGem Alice Li
June 4 Exome PGP7-1-060809 75.5nM; 10ul BioGem Alice Li
June 4 Exome PGP7-2-060809 79.7nM; 20ul BioGem Alice Li
June 10 Exome PGP1-3-061009 34nM; 15ul Zhen Ye Alice Li
June 10 Exome PGP2-3-061009 25nM; 15ul zhen Ye Alice Li
June 10 Exome PGP3-3-061009 22nM; 15ul Zhen Ye Alice Li
June 10 Exome NA12878-3-061009 22nM; 15ul Zhen Ye Alice Li
June 18 Exome PGP5-1-060809 62.5nM; 5ul Zhen Ye Alice Li
June 18 Exome PGP5-2-060809 65.7nM; 5ul Zhen Ye Alice Li
June 18 Exome PGP7-1-060809 75.5nM; 5ul Zhen Ye Alice Li