Sample record: Difference between revisions
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>Jie deng No edit summary |
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| align="center" style="background:#f0f0f0;"|'''prepared by''' | | align="center" style="background:#f0f0f0;"|'''prepared by''' | ||
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| Feb||6||CpG30k_paired end||BJ||75.4nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-13]] | | Feb||6||CpG30k_paired end||BJ||75.4nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-13|Jie]] | ||
|- | |- | ||
| Feb||6||CpG30k_paired end|| Hybrid_1||87.6nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-13]] | | Feb||6||CpG30k_paired end|| Hybrid_1||87.6nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-13|Jie]] | ||
|- | |- | ||
| Feb||6||CpG30k_paired end|| PGP1_F||106nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-13]] | | Feb||6||CpG30k_paired end|| PGP1_F||106nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-13|Jie]] | ||
|- | |- | ||
| Feb||6||CpG30k_paired end|| HUES12||74.9nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-13]] | | Feb||6||CpG30k_paired end|| HUES12||74.9nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-13|Jie]] | ||
|- | |- | ||
| Feb||6||CpG30k_paired end|| PGP1_iPS1||90.3nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-22]] | | Feb||6||CpG30k_paired end|| PGP1_iPS1||90.3nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-22|Jie]] | ||
|- | |- | ||
| Feb||6||CpG30k_paired end|| PGP1_L||77.6nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-22]] | | Feb||6||CpG30k_paired end|| PGP1_L||77.6nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-22|Jie]] | ||
|- | |- | ||
| Feb||6||CpG30k_paired end|| PGP3_L||80.9nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-22]] | | Feb||6||CpG30k_paired end|| PGP3_L||80.9nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-22|Jie]] | ||
|- | |- | ||
| Feb||6||CpG30k_paired end|| PGP9_L||96.9nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-22]] | | Feb||6||CpG30k_paired end|| PGP9_L||96.9nM x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-1-22|Jie]] | ||
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| May ||26||cpg97K_end sequencing||NA21070*1 100406 captured targets|| 25.3ng/ul (96nM) x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-5-20]] | | May ||26||cpg97K_end sequencing||NA21070*1 100406 captured targets|| 25.3ng/ul (96nM) x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-5-20|Jie]] | ||
|- | |- | ||
| May ||26||cpg97K_end sequencing|| NA21070*1 100406 normalized captured targets|| 23.1ng/ul (87nM) x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-5-20]] | | May ||26||cpg97K_end sequencing|| NA21070*1 100406 normalized captured targets|| 23.1ng/ul (87nM) x 15ul;||Yuan Gao||[[Jie:LabNotes/CpgSeq/2009-5-20|Jie]] | ||
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| June||8||cpg97k||DF6-9-9_P16(4)|| 11nM x 10ul x 2 lanes;||BioGem||[[Jie:LabNotes/CpgSeq/2009-5-29]] | | June||8||cpg97k||DF6-9-9_P16(4)|| 11nM x 10ul x 2 lanes;||BioGem||[[Jie:LabNotes/CpgSeq/2009-5-29|Jie]] | ||
|- | |- | ||
| June||8||cpg97k||foreskin|| 15nM x 10ul x | | June||8||cpg97k||foreskin|| 15nM x 10ul x 1 lane.||BioGem||[[Jie:LabNotes/CpgSeq/2009-5-29|Jie]] | ||
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| June||10||Exome||NA12878-3-061009||22nM; 15ul||Zhen Ye||[[Alice:LabNotes/2009-6-10|Alice Li]] | | June||10||Exome||NA12878-3-061009||22nM; 15ul||Zhen Ye||[[Alice:LabNotes/2009-6-10|Alice Li]] | ||
|- | |- | ||
| June||10||cpg97k||NA21070*1_100406_97k ||21.2nM x 14ul;||Bin Ren||[[Jie:LabNotes/CpgSeq/2009-6-4]] | | June||10||cpg97k||NA21070*1_100406_97k ||21.2nM x 14ul;||Bin Ren||[[Jie:LabNotes/CpgSeq/2009-6-4|Jie]] | ||
|- | |- | ||
| June||10||cpg30k||DF6-9-9_P16(4)_30k ||21.2nM x 14ul;||Bin Ren||[[Jie:LabNotes/CpgSeq/2009-6-4]] | | June||10||cpg30k||DF6-9-9_P16(4)_30k ||21.2nM x 14ul;||Bin Ren||[[Jie:LabNotes/CpgSeq/2009-6-4|Jie]] | ||
|- | |- | ||
| June||10||cpg30k||foreskin_30k ||21.2nM x 14ul;||Bin Ren||[[Jie:LabNotes/CpgSeq/2009-6-4]] | | June||10||cpg30k||foreskin_30k ||21.2nM x 14ul;||Bin Ren||[[Jie:LabNotes/CpgSeq/2009-6-4|Jie]] | ||
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| June||18||CES27k9bp_end sequening||Hybrid_1_CES27k9bp|| 4.3ng/ul (37nM) x 5ul||Bin Ren||[[Jie:LabNotes/ASE/2009-6-10]] | | June||18||CES27k9bp_end sequening||Hybrid_1_CES27k9bp|| 4.3ng/ul (37nM) x 5ul||Bin Ren||[[Jie:LabNotes/ASE/2009-6-10|Jie]] | ||
|- | |- | ||
| June||18||CES27k9bp_end sequening|| BJ_CES27k9bp||7.2ng/ul (62nM) x 5ul||Bin Ren||[[Jie:LabNotes/ASE/2009-6-10]] | | June||18||CES27k9bp_end sequening|| BJ_CES27k9bp||7.2ng/ul (62nM) x 5ul||Bin Ren||[[Jie:LabNotes/ASE/2009-6-10|Jie]] | ||
|- | |- | ||
| June||18||cpg97k||DF6-9-9_P16(4)_97k_repeat|| 11nM x 5ul||Bin Ren||[[Jie:LabNotes/CpgSeq/2009-5-29]] | | June||18||cpg97k||DF6-9-9_P16(4)_97k_repeat|| 11nM x 5ul||Bin Ren||[[Jie:LabNotes/CpgSeq/2009-5-29|Jie]] | ||
|- | |- | ||
| June||18||cpg97k||foreskin_97k_repeat ||7.5nM x 5ul||Bin Ren||[[Jie:LabNotes/CpgSeq/2009-5-29]] | | June||18||cpg97k||foreskin_97k_repeat ||7.5nM x 5ul||Bin Ren||[[Jie:LabNotes/CpgSeq/2009-5-29|Jie]] | ||
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| | | | ||
|} | |} |
Revision as of 21:30, 29 June 2009
2009
Month | Date | Probe Set | tube label | concentration ; vol. | sequencing facility | prepared by |
Feb | 6 | CpG30k_paired end | BJ | 75.4nM x 15ul; | Yuan Gao | Jie |
Feb | 6 | CpG30k_paired end | Hybrid_1 | 87.6nM x 15ul; | Yuan Gao | Jie |
Feb | 6 | CpG30k_paired end | PGP1_F | 106nM x 15ul; | Yuan Gao | Jie |
Feb | 6 | CpG30k_paired end | HUES12 | 74.9nM x 15ul; | Yuan Gao | Jie |
Feb | 6 | CpG30k_paired end | PGP1_iPS1 | 90.3nM x 15ul; | Yuan Gao | Jie |
Feb | 6 | CpG30k_paired end | PGP1_L | 77.6nM x 15ul; | Yuan Gao | Jie |
Feb | 6 | CpG30k_paired end | PGP3_L | 80.9nM x 15ul; | Yuan Gao | Jie |
Feb | 6 | CpG30k_paired end | PGP9_L | 96.9nM x 15ul; | Yuan Gao | Jie |
March | 13 | Exome | PGP1-CTRL | 48.5ng/ul; 30ul | Billy Li (Harvard) | Alice Li |
March | 13 | Exome | PGP1-shaked | 46ng/ul; 30ul | Billy Li (Harvard) | Alice Li |
May | 25 | Exome | PGP1E0509A | 77nM; 40ul | BioGem | Alice Li |
May | 25 | Exome | PGP2E0509A | 64nM; 40ul | BioGem | Alice Li |
May | 25 | Exome | PGP3E0509A | 49.5nM; 40ul | BioGem | Alice Li |
May | 25 | Exome | NA12878E0509A | 60nM; 40ul | BioGem | Alice Li |
May | 25 | Exome | PGP1E0509k | 19nM; 40ul | BioGem | Kun Zhang |
May | 25 | Exome | PGP2E0509k | 20nM; 40ul | BioGem | Kun Zhang |
May | 25 | Exome | PGP3E0509k | 19nM; 40ul | BioGem | Kun Zhang |
May | 25 | Exome | NA12878E0509k | 33nM; 40ul | BioGem | Kun Zhang |
May | 26 | cpg97K_end sequencing | NA21070*1 100406 captured targets | 25.3ng/ul (96nM) x 15ul; | Yuan Gao | Jie |
May | 26 | cpg97K_end sequencing | NA21070*1 100406 normalized captured targets | 23.1ng/ul (87nM) x 15ul; | Yuan Gao | Jie |
May | 29 | Exome | PGP2_052909A | 111nM; 15ul | Guao Yuan | Alice Li |
May | 29 | Exome | PGP3_052909A | 126nM; 15ul | Guao Yuan | Alice Li |
June | 4 | Exome | PGP5-1-060809 | 62.5nM; 10ul | BioGem | Alice Li |
June | 4 | Exome | PGP5-2-060809 | 65.7nM; 10ul | BioGem | Alice Li |
June | 4 | Exome | PGP7-1-060809 | 75.5nM; 10ul | BioGem | Alice Li |
June | 4 | Exome | PGP7-2-060809 | 79.7nM; 20ul | BioGem | Alice Li |
June | 8 | cpg97k | DF6-9-9_P16(4) | 11nM x 10ul x 2 lanes; | BioGem | Jie |
June | 8 | cpg97k | foreskin | 15nM x 10ul x 1 lane. | BioGem | Jie |
June | 10 | Exome | PGP1-3-061009 | 34nM; 15ul | Zhen Ye | Alice Li |
June | 10 | Exome | PGP2-3-061009 | 25nM; 15ul | zhen Ye | Alice Li |
June | 10 | Exome | PGP3-3-061009 | 22nM; 15ul | Zhen Ye | Alice Li |
June | 10 | Exome | NA12878-3-061009 | 22nM; 15ul | Zhen Ye | Alice Li |
June | 10 | cpg97k | NA21070*1_100406_97k | 21.2nM x 14ul; | Bin Ren | Jie |
June | 10 | cpg30k | DF6-9-9_P16(4)_30k | 21.2nM x 14ul; | Bin Ren | Jie |
June | 10 | cpg30k | foreskin_30k | 21.2nM x 14ul; | Bin Ren | Jie |
June | 18 | Exome | PGP5-1-060809 | 62.5nM; 5ul | Zhen Ye | Alice Li |
June | 18 | Exome | PGP5-2-060809 | 65.7nM; 5ul | Zhen Ye | Alice Li |
June | 18 | Exome | PGP7-1-060809 | 75.5nM; 5ul | Zhen Ye | Alice Li |
June | 18 | CES27k9bp_end sequening | Hybrid_1_CES27k9bp | 4.3ng/ul (37nM) x 5ul | Bin Ren | Jie |
June | 18 | CES27k9bp_end sequening | BJ_CES27k9bp | 7.2ng/ul (62nM) x 5ul | Bin Ren | Jie |
June | 18 | cpg97k | DF6-9-9_P16(4)_97k_repeat | 11nM x 5ul | Bin Ren | Jie |
June | 18 | cpg97k | foreskin_97k_repeat | 7.5nM x 5ul | Bin Ren | Jie |