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>Alan6017518 (→2013) |
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(391 intermediate revisions by 5 users not shown) | |||
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[[Media: | ==2013== | ||
{| {{table}} | |||
| align="center" style="background:#f0f0f0;"|'''Run''' | |||
| align="center" style="background:#f0f0f0;"|'''Tracking''' | |||
| align="center" style="background:#f0f0f0;"|'''1st Cycle Report''' | |||
| align="center" style="background:#f0f0f0;"|'''Summary''' | |||
| align="center" style="background:#f0f0f0;"|'''% Good Clusters''' | |||
| align="center" style="background:#f0f0f0;"|'''Yield (kbases)''' | |||
|- | |||
| 130104_SN1001||[[Media:130104_SN1001.pdf|Tracking]]||[[Media:130104_SN1001_FBase.pdf|FBase]]||[[Media:130104_SN1001_Summary.pdf|Summary]]||92.19||358,197,114 | |||
|- | |||
| 130119_HL141||[[Media:130119_HL141.pdf|Tracking]]||[[Media:130119_HL141_FBase.pdf|FBase]]||[[Media:130119_HL141_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130128_HL142||[[Media:130128_HL142.pdf|Tracking]]||[[Media:130128_HL142_FBase.pdf|FBase]]||[[Media:130128_HL142_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130205_MiSeqFeb5||[[Media:130205_MiSeqFeb5.pdf|Tracking]]||[[Media:130205_MiSeqFeb5_FBase.pdf|FBase]]||[[Media:130205_MiSeqFeb5_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130207_HL143||[[Media:130207_HL143.pdf|Tracking]]||[[Media:130207_HL143_FBase.pdf|FBase]]||[[Media:130207_HL143_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130219_HL144||[[Media:130219_HL144.pdf|Tracking]]||[[Media:130219_HL144_FBase.pdf|FBase]]||[[Media:130219_HL144_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130227_HiSeqFeb27||[[Media:130227_HiSeqFeb27.pdf|Tracking]]||[[Media:130227_HiSeqFeb27_FBase.pdf|FBase]]||[[Media:130227_HiSeqFeb27_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130226_HL145||[[Media:130226_HL145.pdf|Tracking]]||[[Media:130226_HL145_FBase.pdf|FBase]]||[[Media:130226_HL145_Summary.pdf|Summary]]||81%||18,771,616 (PE 50+7+50 reads, Lane 5 overloaded) | |||
|- | |||
| 130306_HL146||[[Media:130306_HL146.pdf|Tracking]]||[[Media:130306_HL146_FBase.pdf|FBase]]||[[Media:130306_HL146_Summary.pdf|Summary]]||73.1%||12,229,391 (SE 36+7 reads) | |||
|- | |||
| 130316_HL147||[[Media:130316_HL147.pdf|Tracking]]||[[Media:130316_HL147_FBase.pdf|FBase]]||[[Media:130316_HL147_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130321_HL148||[[Media:130321_HL148.pdf|Tracking]]||[[Media:130321_HL148_FBase.pdf|FBase]]||[[Media:130321_HL148_Summary.pdf|Summary]]||82.8%||11,624,271 | |||
|- | |||
| 130322_Miseq||[[Media:130322_Miseq.pdf|Tracking]]||[[Media:130322_Miseq_FBase.pdf|FBase]]||[[Media:130322_Miseq_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130327_HiSeqMar27||[[Media:130327_HiSeqMar27.pdf|Tracking]]||[[Media:130327_HiSeqMar27_FBase.pdf|FBase]]||[[Media:130327_HiSeqMar27_Summary.pdf|Summary]]||?||31,473,118 | |||
|- | |||
| 130402_Miseq||[[Media:130402_Miseq.pdf|Tracking]]||[[Media:130402_Miseq_FBase.pdf|FBase]]||[[Media:130402_Miseq_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130402_HL149||[[Media:130402_HL149.pdf|Tracking]]||[[Media:130402_HL149_FBase.pdf|FBase]]||[[Media:130402_HL149_Summary.pdf|Summary]]||81.3%||13,889,196 | |||
|- | |||
| 130409_HL150||[[Media:130409_HL150.pdf|Tracking]]||[[Media:130409_HL150_FBase.pdf|FBase]]||[[Media:130409_HL150_Summary.pdf|Summary]]||84.5%||14,929,290 | |||
|- | |||
| 130409_Miseq||[[Media:130409_Miseq.pdf|Tracking]]||[[Media:130409_Miseq_FBase.pdf|FBase]]||[[Media:130409_Miseq_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130430_HL151||[[Media:130430_HL151.pdf|Tracking]]||[[Media:130430_HL151_FBase.pdf|FBase]]||[[Media:130430_HL151_Summary.pdf|Summary]]||90.93%||11,274,256 | |||
|- | |||
| 130521_HL152||[[Media:130521_HL152.pdf|Tracking]]||[[Media:130521_HL152_FBase.pdf|FBase]]||[[Media:130521_HL152_Summary.pdf|Summary]]||79.85%||14,463,774 | |||
|- | |||
| 130528_HL153||[[Media:130528_HL153.pdf|Tracking]]||[[Media:130528_HL153_FBase.pdf|FBase]]||[[Media:130528_HL153_Summary.pdf|Summary]]||87.97%?||23,767,498 | |||
|- | |||
| 130612_HL154||[[Media:130612_HL154.pdf|Tracking]]||[[Media:130612_HL154_FBase.pdf|FBase]]||[[Media:130612_HL154_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130614_Miseq||[[Media:130614_Miseq.pdf|Tracking]]||[[Media:130614_Miseq_FBase.pdf|FBase]]||[[Media:130614_Miseq_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130618_Miseq||[[Media:130618_Miseq.pdf|Tracking]]||[[Media:130618_Miseq_FBase.pdf|FBase]]||[[Media:130618_Miseq_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130628_HL155||[[Media:130628_HL155.pdf|Tracking]]||[[Media:130628_HL155_FBase.pdf|FBase]]||[[Media:130628_HL155_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130715_HL156||[[Media:130715_HL156.pdf|Tracking]]||[[Media:130715_HL156_FBase.pdf|FBase]]||[[Media:130715_HL156_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130807_HL157||[[Media:130807_HL157.pdf|Tracking]]||[[Media:130807_HL157_FBase.pdf|FBase]]||[[Media:130807_HL157_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130812_HL158||[[Media:130812_HL158.pdf|Tracking]]||[[Media:130812_HL158_FBase.pdf|FBase]]||[[Media:130812_HL158_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130903_HL159||[[Media:130903_HL159.pdf|Tracking]]||[[Media:130903_HL159_FBase.pdf|FBase]]||[[Media:130903_HL159_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 130917_HL160||[[Media:130917_HL160.pdf|Tracking]]||[[Media:130917_HL160_FBase.pdf|FBase]]||[[Media:130917_HL160_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 131009_HL161||[[Media:131009_HL161.pdf|Tracking]]||[[Media:131009_HL161_FBase.pdf|FBase]]||[[Media:131009_HL161_Summary.pdf|Summary]]||?||? | |||
|} | |||
==2012== | |||
{| {{table}} | |||
| align="center" style="background:#f0f0f0;"|'''Run''' | |||
| align="center" style="background:#f0f0f0;"|'''Tracking''' | |||
| align="center" style="background:#f0f0f0;"|'''1st Cycle Report''' | |||
| align="center" style="background:#f0f0f0;"|'''Summary''' | |||
| align="center" style="background:#f0f0f0;"|'''% Good Clusters''' | |||
| align="center" style="background:#f0f0f0;"|'''Yield (kbases)''' | |||
|- | |||
| 120125_HL113||[[Media:120125_HL113.pdf|Tracking]]||[[Media:120125_HL113_FBase.pdf|FBase]]||[[Media:120125_HL113_Summary.pdf|Summary]]||69.61||22900852 (First attempt failed, probably due to bad reagents. The second one was better. However, lane 7&8 still have very poor quality.) | |||
|- | |||
|- | |||
| 120209_HiseqFeb09||[[Media:120209_HiseqFeb09.pdf|Tracking]]||[[Media:120209_HiSeqFeb09_FBase.pdf|FBase]]||[[Media:120209_HiseqFeb09_Summary.pdf|Summary]]||?||382,585,278 (@ BioGem) | |||
|- | |||
|- | |||
| 120210_HL114||[[Media:120210_HL114.pdf|Tracking]]||[[Media:120210_HL114_FBase.pdf|FBase]]||[[Media:120210_HL114_Summary.pdf|Summary]]||79.14||25,971,886 | |||
|- | |||
|- | |||
| 120217_HL115||[[Media:120217_HL115.pdf|Tracking]]||[[Media:120217_HL115_FBase.pdf|FBase]]||[[Media:120217_HL115_Summary.pdf|Summary]]||?||Read 2 Failed, Rehyb unsuccessful, Received illumina replacement | |||
|- | |||
|- | |||
| 120313_HiseqMar13||[[Media:120313_HiseqMar13.pdf|Tracking]]||[[Media:120313_HiseqMar13_FBase.pdf|FBase]]||[[Media:120313_HiseqMar13_Summary.pdf|Summary]]||92.95||318,641,613 | |||
|- | |||
|- | |||
| 120317_HL116||[[Media:120317_HL116.pdf|Tracking]]||[[Media:120317_HL116_FBase.pdf|FBase]]||[[Media:120317_HL116_Summary.pdf|Summary]]||?||? | |||
|- | |||
|- | |||
| 120412_HL117||[[Media:120412_HL117.pdf|Tracking]]||[[Media:120412_HL117_FBase.pdf|FBase]]||[[Media:120412_HL117_Summary.pdf|Summary]]||?||? Read 2 Failed kits replaced | |||
|- | |||
|- | |||
| 120426_HL118||[[Media:120426_HL118.pdf|Tracking]]||[[Media:120426_HL118_FBase.pdf|FBase]]||[[Media:120426_HL118_Summary.pdf|Summary]]||?||~50Gb | |||
|- | |||
|- | |||
| 120503_HiseqMay04||[[Media:120426_HiseqApr26.pdf|Tracking]]||[[Media:120503_May04_FBase.pdf|FBase]]||[[Media:120504_HiseqMay04_Summary.pdf|Summary]]||95.47||291,670,307 | |||
|- | |||
|- | |||
| 120510_HiseqMay10||[[Media:120510_HiseqMay10.pdf|Tracking]]||[[Media:120510_May10_FBase.pdf|FBase]]||[[Media:120510_HiseqMay10_Summary.pdf|Summary]]||93.34||347,495,254 | |||
|- | |||
|- | |||
| 120525_HiseqMay25||[[Media:120516_HiseqMay16.pdf|Tracking]]||[[Media:120516_May16_FBase.pdf|FBase]]||[[Media:120516_HiseqMay16_Summary.pdf|Summary]]||81.77%||260,691,319 | |||
|- | |||
|- | |||
| 120519_HL119||[[Media:120519_HL119.pdf|Tracking]]||[[Media:120519_HL119_FBase.pdf|FBase]]||[[Media:120519_HL118_Summary.pdf|Summary]]||55.5%||12,262,059 | |||
|- | |||
|- | |||
| 120531_HiseqMay31||[[Media:120529_HiseqMay29.pdf|Tracking]]||[[Media:120529_May29_FBase.pdf|FBase]]||[[Media:120529_HiseqMay29_Summary.pdf|Summary]]||90.53%||408,717,804 | |||
|- | |||
|- | |||
| 120531_HL120||[[Media:120531_HL120.pdf|Tracking]]||[[Media:120531_HL120_FBase.pdf|FBase]]||[[Media:120531_HL120_Summary.pdf|Summary]]||?||? | |||
|- | |||
|- | |||
| 120608_HiseqJun08||[[Media:120608_HiseqJun08.pdf|Tracking]]||[[Media:120608_HiseqJun08_FBase.pdf|FBase]]||[[Media:120608_HiseqJun08_Summary.pdf|Summary]]||96.99%||172,621,300 | |||
|- | |||
| 120702_HL124||[[Media:120702_HL124.pdf|Tracking]]||[[Media:120702_HL124_FBase.pdf|FBase]]||[[Media:120702_HL124_Summary.pdf|Summary]]||88.08||33,307,344 | |||
Intensities low for read 3 terminate run early at cycle 168 | |||
|- | |||
| 120712_HL125||[[Media:120712_HL125.pdf|Tracking]]||[[Media:120712_HL125_FBase.pdf|FBase]]||[[Media:120712_HL125_Summary.pdf|Summary]]||79.12||16,601,513 | |||
|- | |||
| 120711_HiSeqJul11||[[Media:120711_HiSeqJul11.pdf|Tracking]]||[[Media:120711_HiSeqJul11_FBase.pdf|FBase]]||[[Media:120711_HiSeqJul11_Summary.pdf|Summary]]||94.06||301,875,173 | |||
|- | |||
| 120716_HL126||[[Media:120716_HL126.pdf|Tracking]]||[[Media:120716_HL126_FBase.pdf|FBase]]||[[Media:120716_HL126_Summary.pdf|Summary]]||80.65||11,488,063 | |||
|- | |||
| 120727_HL127||[[Media:120727_HL127.pdf|Tracking]]||[[Media:120727_HL127_FBase.pdf|FBase]]||[[Media:120727_HL127_Summary.pdf|Summary]]||85.67||28,477,248 | |||
|- | |||
| 120807_HL128||[[Media:120807_HL128.pdf|Tracking]]||[[Media:120807_HL128_FBase.pdf|FBase]]||[[Media:120807_HL128_Summary.pdf|Summary]]||88.52||14,546,195 | |||
|- | |||
| 120818_HL129||[[Media:120818_HL129.pdf|Tracking]]||[[Media:120818_HL129_FBase.pdf|FBase]]||[[Media:120818_HL129_Summary.pdf|Summary]]||74.32||15,944,231 | |||
|- | |||
| 120828_HiSeqAug28||[[Media:120828_HiSeqAug28.pdf|Tracking]]||[[Media:120828_HiSeqAug28_FBase.pdf|FBase]]||[[Media:120828_HiSeqAug28_Summary.pdf|Summary]]||90.41||320,114,704 | |||
|- | |||
| 120906_DD004||[[Media:120906_DD004.png|Tracking]]||[[Media:120906_DD004_FBase.pdf|FBase]]||[[Media:120906_DD004_Summary.pdf|Summary]]||68.85||9,553,625(s1,s2,s3 were underloaded, s8 no cluster) | |||
|- | |||
| 120917_HL130||[[Media:120917_HL130.pdf|Tracking]]||[[Media:120917_HL130_FBase.pdf|FBase]]||[[Media:120917_HL130_Summary.pdf|Summary]]||80.49||6,971,676 (s8 no cluster, replacement received for both runs) | |||
|- | |||
| 121004_HL131||[[Media:121004_HL131.pdf|Tracking]]||[[Media:121004_HL131_FBase.pdf|FBase]]||[[Media:121004_HL131_Summary.pdf|Summary]]||88.95||9,465,433 | |||
|- | |||
| 121017_HL132||[[Media:121017_HL132.pdf|Tracking]]||[[Media:121017_HL132_FBase.pdf|FBase]]||[[Media:121017_HL132_Summary.pdf|Summary]]||88.01||9,615,198 | |||
|- | |||
| 121026_HL133||[[Media:121026_HL133.pdf|Tracking]]||[[Media:121026_HL133_FBase.pdf|FBase]]||[[Media:121026_HL133_Summary.pdf|Summary]]||88.45||33,030,297 | |||
|- | |||
| 121101_HL134||[[Media:121101_HL134.pdf|Tracking]]||[[Media:121101_HL134_FBase.pdf|FBase]]||[[Media:121101_HL134_Summary.pdf|Summary]]||89.09||13,324,015 | |||
|- | |||
|| 121108_HL135||[[Media:121108_HL135.pdf|Tracking]]||[[Media:121108_HL135_FBase.pdf|FBase]]||[[Media:121108_HL135_Summary.pdf|Summary]]||82.61||25,068,908 (s7 no cluster, line clogged?, replacement received) | |||
|- | |||
| 121108_HiSeqNov8||[[Media:121108_HiSeqNov8.pdf|Tracking]]||[[Media:121108_HiSeqNov8_FBase.pdf|FBase]]||[[Media:121108_HiSeqNov8_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 121120_HL136||[[Media:121120_HL136.pdf|Tracking]]||[[Media:121120_HL136_FBase.pdf|FBase]]||[[Media:121120_HL136_Summary.pdf|Summary]]||57.82||8,626,041 (s1-s7of HL135 & s2 no visible clusters, library issue?) | |||
|- | |||
| 121130_HL137||[[Media:121130_HL137.pdf|Tracking]]||[[Media:121130_HL137_FBase.pdf|FBase]]||[[Media:121130_HL137_Summary.pdf|Summary]]||?||? (s1 no clusters, s2 primer lawn issue, FC reimbursed) | |||
|- | |||
| 121210_HL137_2||[[Media:121210_HL137_2.pdf|Tracking]]||[[Media:121210_HL137_2_FBase.pdf|FBase]]||[[Media:121210_HL137_2_Summary.pdf|Summary]]||75.4||9,607,022 | |||
|- | |||
| 121214_HL138||[[Media:121214_HL138.pdf|Tracking]]||[[Media:121214_HL138_FBase.pdf|FBase]]||[[Media:121214_HL138_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 121218_HL139||[[Media:121218_HL139.pdf|Tracking]]||[[Media:121218_HL139_FBase.pdf|FBase]]||[[Media:121218_HL139_Summary.pdf|Summary]]||?||? | |||
|- | |||
| 121222_HL140||[[Media:121222_HL140.pdf|Tracking]]||[[Media:121222_HL140_FBase.pdf|FBase]]||[[Media:121222_HL140_Summary.pdf|Summary]]||?||?(read1 rehyb, 2x36sbs kits replaced) | |||
|} | |||
==2011== | |||
{| {{table}} | |||
| align="center" style="background:#f0f0f0;"|'''Run''' | |||
| align="center" style="background:#f0f0f0;"|'''Tracking''' | |||
| align="center" style="background:#f0f0f0;"|'''1st Cycle Report''' | |||
| align="center" style="background:#f0f0f0;"|'''Summary''' | |||
| align="center" style="background:#f0f0f0;"|'''% Good Clusters''' | |||
| align="center" style="background:#f0f0f0;"|'''Yield (kbases)''' | |||
|- | |||
|- | |||
| 110112_HL086||[[Media:110112_HL086.pdf|Tracking]]||[[Media:110112_HL086_FBase.pdf|FBase]]||[[Media:110112_HL086_Summary.pdf|Summary]]||90.6||27,432,853 | |||
|- | |||
|- | |||
| 110119_HL087||[[Media:110119_HL087.pdf|Tracking]]||[[Media:110119_HL087_FBase.pdf|FBase]]||[[Media:110119_HL087_Summary.pdf|Summary]]||85.44||48,665,171 | |||
|- | |||
|- | |||
| 110303_HL088||[[Media:110303_HL088.pdf|Tracking]]||[[Media:110303_HL088_FBase.pdf|FBase]]||[[Media:110303_HL088_Summary.pdf|Summary]]||79.01||23,332,319 | |||
|- | |||
|- | |||
| 110307_HL089||[[Media:110307_HL089.pdf|Tracking]]||[[Media:110307_HL089_FBase.pdf|FBase]]||[[Media:110307_HL089_Summary.pdf|Summary]]||87.23||48,487,197 | |||
|- | |||
|- | |||
| 110318_HL090||[[Media:110318_HL090.pdf|Tracking]]||[[Media:110318_HL090_FBase.pdf|FBase]]||[[Media:110318_HL090_Summary.pdf|Summary]]||80.98||23,299,776 | |||
|- | |||
|- | |||
| 110323_HL091||[[Media:110323_HL091.pdf|Tracking]]||[[Media:110323_HL091_FBase.pdf|FBase]]||[[Media:110323_HL091_Summary.pdf|Summary]]||83||29,265,834 | |||
|- | |||
|- | |||
| 110408_HL092||[[Media:110408_HL092.pdf|Tracking]]||[[Media:110408_HL092_FBase.pdf|FBase]]||[[Media:110408_HL092_Summary.pdf|Summary]]||81.22||12,957,480 | |||
|- | |||
|- | |||
| 110417_HL093||[[Media:110417_HL093.pdf|Tracking]]||[[Media:110417_HL093_FBase.pdf|FBase]]||[[Media:110417_HL093_Summary.pdf|Summary]]||83.85||19,081,551 | |||
|- | |||
|- | |||
| 110513_HL094||[[Media:110513_HL094.pdf|Tracking]]||[[Media:110513_HL094_FBase.pdf|FBase]]||[[Media:110513_HL094_Summary.pdf|Summary]]||80.27||77,575,532 | |||
|- | |||
|- | |||
| 110608_HL095||[[Media:110608_HL095.pdf|Tracking]]||[[Media:110608_HL095_FBase.pdf|FBase]]||[[Media:110608_HL095_Summary.pdf|Summary]]||82||24,590,778 | |||
|- | |||
|- | |||
| 110619_HL096||[[Media:110619_HL096.pdf|Tracking]]||[[Media:110619_HL096_FBase.pdf|FBase]]||[[Media:110619_HL096_Summary.pdf|Summary]]||85.84||27,172,886 (2nd reads failed) | |||
|- | |||
|- | |||
| 110626_HL097||[[Media:110626_HL097.pdf|Tracking]]||[[Media:110626_HL097_FBase.pdf|FBase]]||[[Media:110626_HL097_Summary.pdf|Summary]]||78.6||25,943,849 (Repeat of HL096) | |||
|- | |||
|- | |||
| 110714_HL098||[[Media:110714_HL098.pdf|Tracking]]||[[Media:110714_HL098_FBase.pdf|FBase]]||[[Media:110714_HL098_Summary.pdf|Summary]]||85.93||51,666,958 | |||
|- | |||
|- | |||
| 110726_HL099||[[Media:110726_HL099.pdf|Tracking]]||[[Media:110726_HL099_FBase.pdf|FBase]]||[[Media:110726_HL099_Summary.pdf|Summary]]||74||14,508,606 | |||
|- | |||
|- | |||
| 110811_HL100||[[Media:110811_HL100.pdf|Tracking]]||[[Media:110811_HL100_FBase.pdf|FBase]]||[[Media:110811_HL100_Summary.pdf|Summary]]||74||8,597,569 | |||
|- | |||
|- | |||
| 110902_HL101||[[Media:110902_HL101.pdf|Tracking]]||[[Media:110902_HL101_FBase.pdf|FBase]]||[[Media:110902_HL101_Summary.pdf|Summary]]||75||15,810,995 | |||
|- | |||
|- | |||
| 110907_HL102||[[Media:110907_HL102.pdf|Tracking]]||[[Media:110907_HL102_FBase.pdf|FBase]]||[[Media:110907_HL102_Summary.pdf|Summary]]||65.47||9,448,824 | |||
|- | |||
|- | |||
| 110923_HL103||[[Media:110923_HL103.pdf|Tracking]]||[[Media:110923_HL103_FBase.pdf|FBase]]||[[Media:110923_HL103_Summary.pdf|Summary]]||58.64||15,816,673 | |||
|- | |||
|- | |||
| 110929_SN1001(HiSeq)||Tracking||FBase||[[Media:110929_SN1001_Summary.pdf|Summary]]||90.39||366,883,826 | |||
|- | |||
|- | |||
| 111013_HL105||[[Media:111013_HL105.pdf|Tracking]]||[[Media:111013_HL105_FBase.pdf|FBase]]||[[Media:111013_HL105_Summary.pdf|Summary]]||80.5||30,080,124 | |||
|- | |||
|- | |||
| 111019_HL106||[[Media:111019_HL106.pdf|Tracking]]||[[Media:111019_HL106_FBase.pdf|FBase]]||[[Media:111019_HL106_Summary.pdf|Summary]]||?||? | |||
|- | |||
|- | |||
| 111030_HL107||[[Media:111030_HL107.pdf|Tracking]]||[[Media:111030_HL107_FBase.pdf|FBase]]||[[Media:111030_HL107_Summary.pdf|Summary]]||65.5||15,508,439 | |||
|- | |||
|- | |||
| 111109_HL108||[[Media:111109_HL108.pdf|Tracking]]||[[Media:111109_HL108_FBase.pdf|FBase]]||[[Media:111109_HL108_Summary.pdf|Summary]]||63.4||7,910,991 | |||
|- | |||
|- | |||
| 111112_HL109||[[Media:111112_HL109.pdf|Tracking]]||[[Media:111112_HL109_FBase.pdf|FBase]]||[[Media:111112_HL109_Summary.pdf|Summary]]||78.2||54,405,997 | |||
|- | |||
|- | |||
| 111124_HL110||[[Media:111124_HL110.pdf|Tracking]]||[[Media:111124_HL110_HL109_FBase.pdf|FBase]]||[[Media:111124_HL110_Summary.pdf|Summary]]||78.23||54,405,997 (very low quality for 2nd end) | |||
|- | |||
|- | |||
| 111207_HL111||[[Media:111207_HL111.pdf|Tracking]]||[[Media:111207_HL111_FBase.pdf|FBase]]||[[Media:111207_HL111_Summary.pdf|Summary]]||86.98||391,944,270 (HiSeq PE110) | |||
|- | |||
|- | |||
| 111222_HL112||[[Media:111222_HL112.pdf|Tracking]]||[[Media:111222_HL112_FBase.pdf|FBase]]||[[Media:111222_HL112_Summary.pdf|Summary]]||?||Run failed,cracked manifold, kits replaced by illumina | |||
|- | |||
| | |||
|} | |||
==2010== | |||
{| {{table}} | |||
| align="center" style="background:#f0f0f0;"|'''Run''' | |||
| align="center" style="background:#f0f0f0;"|'''Tracking''' | |||
| align="center" style="background:#f0f0f0;"|'''1st Cycle Report''' | |||
| align="center" style="background:#f0f0f0;"|'''Summary''' | |||
| align="center" style="background:#f0f0f0;"|'''% Good Clusters''' | |||
| align="center" style="background:#f0f0f0;"|'''Yield (kbases)''' | |||
|- | |||
|- | |||
| 100101_HL031||[[Media:100101_HL031_Tracking.pdf|Tracking]]||[[Media:100101_HL031_FBase.pdf|FBase]]||[[Media:100101_HL031_Summary.pdf|Summary]]||?||Failed, overloaded, focusing laser | |||
|- | |||
|- | |||
| 100105_HL032||[[Media:100105_HL032_Tracking.pdf|Tracking]]||[[Media:100105_HL032_FBase.pdf|FBase]]||[[Media:100105_HL032_Summary.pdf|Summary]]||61.24||2,940,492 | |||
|- | |||
|- | |||
| 100113_HL033||[[Media:100113_HL033_Tracking.pdf|Tracking]]||[[Media:100113_HL033_FBase.pdf|FBase]]||[[Media:100113_HL033_Summary.pdf|Summary]]||?||? | |||
|- | |||
|- | |||
| 100117_HL034||[[Media:100117_HL034_Tracking.pdf|Tracking]]||[[Media:100117_HL034_FBase.pdf|FBase]]||[[Media:100117_HL034_Summary.pdf|Summary]]||72.28||6,896,056 | |||
|- | |||
|- | |||
| 100123_HL035||[[Media:100123_HL035_Tracking.pdf|Tracking]]||[[Media:100123_HL035_FBase.pdf|FBase]]||[[Media:100123_HL035_Summary.pdf|Summary]]||74,49||9,045,278 | |||
|- | |||
|- | |||
| 100127_HL036||[[Media:100127_HL036_Tracking.pdf|Tracking]]||[[Media:100127_HL036_FBase.pdf|FBase]]||[[Media:100127_HL036_Summary.pdf|Summary]]||69.07||7,518,218 | |||
|- | |||
|- | |||
| 100221_HL037||[[Media:100201_HL037_Tracking.pdf|Tracking]]||[[Media:100201_HL037_FBase.pdf|FBase]]||[[Media:100201_HL037_Summary.pdf|Summary]]||51.39||5,993,304 | |||
|- | |||
| 100207_HL038||[[Media:100207_HL038_Tracking.pdf|Tracking]]||[[Media:100207_HL038_FBase.pdf|FBase]]||[[Media:100207_HL038_Summary.pdf|Summary]]||82.62||11,587,982 | |||
|- | |||
| 100212_HL039||[[Media:100212_HL039_Tracking.pdf|Tracking]]||[[Media:100212_HL039_FBase.pdf|FBase]]||[[Media:100212_HL039_Summary.pdf|Summary]]||53.7||5,163,203 | |||
|- | |||
|- | |||
| 100219_HL040||[[Media:100219_HL040_Tracking.pdf|Tracking]]||[[Media:100219_HL040_FBase.pdf|FBase]]||[[Media:100219_HL040_Summary.pdf|Summary]]||59.35||6,091,535 | |||
|- | |||
|- | |||
| 100226_HL041||[[Media:100226_HL041_Tracking.pdf|Tracking]]||[[Media:100226_HL041_FBase.pdf|FBase]]||[[Media:100226_HL041_Summary.pdf|Summary]]||71.02||11,153,313 | |||
|- | |||
|- | |||
| 100303_HL042||[[Media:100303_HL042_Tracking.pdf|Tracking]]||[[Media:100303_HL042_FBase.pdf|FBase]]||[[Media:100303_HL042_Summary.pdf|Summary]]||68.17||7,113,883 | |||
|- | |||
|- | |||
| 100305_HL043||[[Media:100305_HL043_Tracking.pdf|Tracking]]||[[Media:100305_HL043_FBase.pdf|FBase]]||[[Media:100305_HL043_Summary.pdf|Summary]]||61.8||8,949,130 | |||
|- | |||
|- | |||
| 100309_HL044||[[Media:100309_HL044_Tracking.pdf|Tracking]]||[[Media:100309_HL044_FBase.pdf|FBase]]||[[Media:100309_HL044_Summary.pdf|Summary]]||73.91||6,019,006 | |||
|- | |||
|- | |||
| 100312_HL045||[[Media:100312_HL045_Tracking.pdf|Tracking]]||[[Media:100312_HL045_FBase.pdf|FBase]]||[[Media:100312_HL045_Summary.pdf|Summary]]||81.68||14,577,361 | |||
|- | |||
|- | |||
| 100318_HL046_2||[[Media:100318_HL046_2_Tracking.pdf|Tracking]]||[[Media:100318_HL046_2_FBase.pdf|FBase]]||[[Media:100318_HL046_2_Summary.pdf|Summary]]||13||Failed(focusing??) | |||
|- | |||
|- | |||
| 100318_HL046_3||[[Media:100318_HL046_Tracking.pdf|Tracking]]||[[Media:100318_HL046_FBase.pdf|FBase]]||[[Media:100318_HL046_Summary.pdf|Summary]]||36.4||3,481,844(overloaded) | |||
|- | |||
|- | |||
| 100326_HL047||[[Media:100326_HL047_Tracking.pdf|Tracking]]||[[Media:100326_HL047_FBase.pdf|FBase]]||[[Media:100326_HL047_Summary.pdf|Summary]]||80.56||15,102,359 | |||
|- | |||
|- | |||
| 100329_HL048||[[Media:100329_HL048_Tracking.pdf|Tracking]]||[[Media:100329_HL048_FBase.pdf|FBase]]||[[Media:100329_HL048_Summary.pdf|Summary]]||76.02||6,467,724(38bp,wrong flowcell orientation) | |||
|- | |||
|- | |||
| 100329_HL048_repeat||[[Media:100329_HL048_Tracking.pdf|Tracking]]||[[Media:100329_HL048_repeat_FBase.pdf|FBase]]||[[Media:100329_HL048_repeat_Summary.pdf|Summary]]||80.94||16,728,503 | |||
|- | |||
|- | |||
| 100329_DD001||[[Media:100329_DD001.pdf|Tracking]]||[[Media:100329_DD001_FBase.pdf|FBase]]||[[Media:100329_DD001_Summary.pdf|Summary]]||?||Ran 4 complete cycles, ended because of low quality and intensity | |||
|- | |||
|- | |||
| 100329_DD001_repeat||[[Media:100329_DD001.pdf|Tracking]]||[[Media:100329_DD001_FBase_repeat.pdf|FBase]]||[[Media:100329_DD001_Summary.pdf|Summary]]||87.04||5,765,966(flowcell underloaded) | |||
|- | |||
|- | |||
| 100411_HL049_2||[[Media:100411_HL049_2.pdf|Tracking]]||[[Media:100411_HL049_2_FBase_repeat.pdf|FBase]]||[[Media:100411_HL049_2_Summary.pdf|Summary]]||71.04||8,624,535(defective primer lawn) | |||
|- | |||
|- | |||
| 100415_HL050||[[Media:100415_HL050.pdf|Tracking]]||[[Media:100415_HL050_FBase_repeat.pdf|FBase]]||[[Media:100415_HL050_Summary.pdf|Summary]]||83.14||13,132,725 | |||
|- | |||
|- | |||
| 100420_HL051||[[Media:100420_HL051.pdf|Tracking]]||[[Media:100420_HL051_FBase_repeat.pdf|FBase]]||[[Media:100420_HL051_Summary.pdf|Summary]]||89.86||2,839,513 | |||
|- | |||
|- | |||
| 100424_DD002||[[Media:100424_DD002.pdf|Tracking]]||[[Media:100424_DD002_FBase.pdf|FBase]]||[[Media:100424_DD002_Summary.pdf|Summary]]|| || Ran 24 cycles, Scott said software restarts at 25th and 50th cycles, and was a connection problem regarding problem with re-accessing the recipe file (primary Run folder was stored in network drive instead of D drive. Intensities were low (below 2000 for all lanes), probably due to using primers not from Illumina. | |||
|- | |||
| 100425_DD002_reprimed||[[Media:100425_DD002_reprimed.pdf|Tracking]]||[[Media:100425_DD002_FBase_reprimed.pdf|FBase]]||[[Media:100425_DD002_Summary.pdf|Summary]]|| || Reprimed with standard Illumina primers. | |||
|- | |||
|- | |||
| 100429_HL052||[[Media:100429_HL052.pdf|Tracking]]||[[Media:100429_HL052_FBase.pdf|FBase]]||[[Media:100429_HL052_Summary.pdf|Summary]]||85.95||1,175,185 | |||
|- | |||
|- | |||
| 100503_HL053||[[Media:100503_HL053.pdf|Tracking]]||[[Media:100503_HL053_FBase.pdf|FBase]]||[[Media:100503_HL053_Summary.pdf|Summary]]||80.52||31,007,707 | |||
|- | |||
|- | |||
| 100514_HL054||[[Media:100514_HL054.pdf|Tracking]]||[[Media:100514_HL054_FBase.pdf|FBase]]||[[Media:100514_HL054_Summary.pdf|Summary]]||89.93||32,835,688 | |||
|- | |||
|- | |||
| 100523_HL055||[[Media:100523_HL055.pdf|Tracking]]||[[Media:100523_HL055_FBase.pdf|FBase]]||[[Media:100523_HL05_Summary.pdf|Summary]]||83.12||15775525(2nd reads failed, low intensity) | |||
|- | |||
|- | |||
| 100601_HL056||[[Media:100601_HL056.pdf|Tracking]]||[[Media:100601_HL056_FBase.pdf|FBase]]||[[Media:100601_HL056_Summary.pdf|Summary]]||84.17||17,156,595 | |||
|- | |||
|- | |||
| 100605_HL057||[[Media:100605_HL057.pdf|Tracking]]||[[Media:100605_HL057_FBase.pdf|FBase]]||[[Media:100605_HL057_Summary.pdf|Summary]]||88.53||6,862,886 | |||
|- | |||
|- | |||
| 100612_HL058||[[Media:100612_HL058.pdf|Tracking]]||[[Media:100612_HL058_FBase.pdf|FBase]]||[[Media:100612_HL058_Summary.pdf|N/A]]||N/A||Overloading and Low Cluster Density | |||
|- | |||
|- | |||
| 100615_HL058_2||[[Media:100615_HL058_2.pdf|Tracking]]||[[Media:100615_HL058_2_FBase.pdf|FBase]]||[[Media:100615_HL058_2_Summary.pdf|Summary]]||62.83||5,242,825 | |||
|- | |||
|- | |||
| 100623_HL059||[[Media:100623_HL059.pdf|Tracking]]||[[Media:100623_HL059_FBase.pdf|FBase]]||[[Media:100623_HL059_Summary.pdf|N/A]]||?||Failed (Low Cluster Density) | |||
|- | |||
|- | |||
| 100627_HL060||[[Media:100627_HL060.pdf|Tracking]]||[[Media:100627_HL060_FBase.pdf|FBase]]||[[Media:100627_HL060_Summary.pdf|Summary]]||?||? | |||
|- | |||
|- | |||
| 100630_HL061||[[Media:100630_HL061.pdf|Tracking]]||[[Media:100630_HL061_FBase.pdf|FBase]]||[[Media:100630_HL061_Summary.pdf|Summary]]||?||Stopped due to low number of clusters | |||
|- | |||
|- | |||
| 100701_HL061_2||[[Media:100701_HL061_2.pdf|Tracking]]||[[Media:100701_HL061_2_FBase.pdf|FBase]]||[[Media:100701_HL061_2_Summary.pdf|Summary]]||?||Defected flowcell | |||
|- | |||
|- | |||
| 100703_HL061_3||[[Media:100703_HL061_3.pdf|Tracking]]||[[Media:100703_HL061_3_FBase.pdf|FBase]]||[[Media:100703_HL061_3_Summary.pdf|Summary]]||89.5||11,854,572 | |||
|- | |||
|- | |||
| 100707_HL062||[[Media:100707_HL062.pdf|Tracking]]||[[Media:100707_HL062_FBase.pdf|FBase]]||[[Media:100707_HL062_Summary.pdf|Summary]]||91.52||5,171,211 | |||
|- | |||
|- | |||
| 100713_HL063||[[Media:100713_HL063.pdf|Tracking]]||[[Media:100713_HL063_FBase.pdf|FBase]]||[[Media:100713_HL063_Summary.pdf|Summary]]||91.19||12,767,919 | |||
|- | |||
|- | |||
| 100717_HL064||[[Media:100717_HL064.pdf|Tracking]]||[[Media:100717_HL064_FBase.pdf|FBase]]||[[Media:100717_HL064_Summary.pdf|Summary]]||87.4||11,306,633 | |||
|- | |||
|- | |||
| 100721_HL065||[[Media:100721_HL065.pdf|Tracking]]||[[Media:100721_HL065_FBase.pdf|FBase]]||[[Media:100721_HL065_Summary.pdf|Summary]]||87.48||12,959,289 | |||
|- | |||
|- | |||
| 100726_HL066||[[Media:100726_HL066.pdf|Tracking]]||[[Media:100726_HL066_FBase.pdf|FBase]]||[[Media:100726_HL066_Summary.pdf|Summary]]||61.5||9,875,407 (Low yield due to bad focusing, mainly on lane 5) | |||
|- | |||
|- | |||
| 100802_HL067||[[Media:100802_HL067.pdf|Tracking]]||[[Media:100802_HL067_FBase.pdf|FBase]]||[[Media:100802_HL067_Summary.pdf|Summary]]||64.16||5,816,951 (Overloaded lane 1 & 2 due to underestimation of library concentration) | |||
|- | |||
|- | |||
| 100807_HL068||[[Media:100807_HL068.pdf|Tracking]]||[[Media:100807_HL068_FBase.pdf|FBase]]||[[Media:100807_HL068_Summary.pdf|Summary]]||87.07||10,732,349 | |||
|- | |||
|- | |||
| 100814_HL069||[[Media:100814_HL069.pdf|Tracking]]||[[Media:100814_HL069_FBase.pdf|FBase]]||[[Media:100814_HL069_Summary.pdf|Summary]]||77.39||8,878,272 | |||
|- | |||
|- | |||
| 100817_HL070||[[Media:100817_HL070.pdf|Tracking]]||[[Media:100817_HL070_FBase.pdf|FBase]]||[[Media:100817_HL070_Summary.pdf|Summary]]||90.53||10,797,519 | |||
|- | |||
|- | |||
| 100825_HL071||[[Media:100825_HL071.pdf|Tracking]]||[[Media:100825_HL071_FBase.pdf|FBase]]||[[Media:100825_HL071_Summary.pdf|Summary]]||83.15||11,955,485 | |||
|- | |||
|- | |||
| 100913_HL072||[[Media:100913_HL072.pdf|Tracking]]||[[Media:100913_HL072_FBase.pdf|FBase]]||[[Media:100913_HL072_Summary.pdf|Summary]]||86.49||4,533,300 (No Clusters on lane 7 & 8) | |||
|- | |||
|- | |||
| 100917_HL073||[[Media:100917_HL073.pdf|Tracking]]||[[Media:100917_HL073_FBase.pdf|FBase]]||[[Media:100917_HL073_Summary.pdf|Summary]]||86.46||6,258,409 | |||
|- | |||
|- | |||
| 100921_HL074||[[Media:100921_HL074.pdf|Tracking]]||[[Media:100921_HL074_FBase.pdf|FBase]]||[[Media:100921_HL074_Summary.pdf|Summary]]||81.22||10,415,353 | |||
|- | |||
|- | |||
| 100925_HL075||[[Media:100925_HL075.pdf|Tracking]]||[[Media:100925_HL075_FBase.pdf|FBase]]||[[Media:100925_HL075_Summary.pdf|Summary]]||80.98||29,364,373 | |||
|- | |||
|- | |||
| 101006_HL076||[[Media:101006_HL076.pdf|Tracking]]||[[Media:HL076 first base.pdf|FBase]]||[[Media:101006_HL076_Summary.pdf|Summary]]||87.84||8,005,306 | |||
|- | |||
|- | |||
| 100810_DD003||[[Media:100810_DD003_corrected.pdf|Tracking]]||[[Media:DD003 first base.pdf|FBase]]||[[Media:101008_DD003_Summary.pdf|Summary]]||89.08||12821744 | |||
|- | |||
|- | |||
| 100812_AL009||[[Media:100812_AL009_corrected.pdf|Tracking]]||[[Media:AL009 first base.pdf|FBase]]||[[Media:101012_AL009_Summary.pdf|Summary]]||86.91||15,843,582 | |||
|- | |||
|- | |||
| 101016_HL077||[[Media:101016_HL077.pdf|Tracking]]||[[Media:101016_HL077_FBase.pdf|FBase]]||[[Media:101016_HL077_Summary.pdf|Summary]]||86.02||16,771,454 | |||
|- | |||
|- | |||
| 101021_HL078||[[Media:101021_HL078.pdf|Tracking]]||[[Media:101021_HL078_FBase.pdf|FBase]]||[[Media:101021_HL078_Summary.pdf|Summary]]||?||? | |||
|- | |||
|- | |||
| 101026_HL079||[[Media:101026_HL079.pdf|Tracking]]||[[Media:101026_HL079_FBase.pdf|FBase]]||[[Media:101026_HL079_Summary.pdf|Summary]]||61.61||12,414,871 | |||
|- | |||
|- | |||
| 101030_HL080||[[Media:101030_HL080.pdf|Tracking]]||[[Media:101030_HL080_FBase.pdf|FBase]]||[[Media:101030_HL080_Summary.pdf|Summary]]||78.26||13,909,754 | |||
|- | |||
|- | |||
| 101108_HL081||[[Media:101108_HL081.pdf|Tracking]]||[[Media:101108_HL081_FBase.pdf|FBase]]||[[Media:101108_HL081_Summary.pdf|Summary]]||86.06||43,250,579 | |||
|- | |||
|- | |||
| 101117_HL082||[[Media:101117_HL082.pdf|Tracking]]||[[Media:101117_HL082_FBase.pdf|FBase]]||[[Media:101117_HL082_Summary.pdf|Summary]]||81.99||19,504,189 | |||
|- | |||
|- | |||
| 101123_HL083||[[Media:101123_HL083.pdf|Tracking]]||[[Media:101123_HL083_FBase.pdf|FBase]]||[[Media:101123_HL083_Summary.pdf|Summary]]||87.92||45,478,237 | |||
|- | |||
|- | |||
| 101203_HL084||[[Media:101203_HL084.pdf|Tracking]]||[[Media:101203_HL084_FBase.pdf|FBase]]||[[Media:101203_HL084_Summary.pdf|Summary]]||87.07||21,585,694 | |||
|- | |||
|- | |||
| 101209_HL085||[[Media:101209_HL085.pdf|Tracking]]||[[Media:101209_HL085_FBase.pdf|FBase]]||[[Media:101209_HL085_Summary.pdf|Summary]]||86.69||45,305,249 | |||
|- | |||
| | |||
|} | |||
==2009== | |||
{| {{table}} | {| {{table}} | ||
| align="center" style="background:#f0f0f0;"|'''Run''' | | align="center" style="background:#f0f0f0;"|'''Run''' | ||
Line 22: | Line 490: | ||
| 090816_HL006||[[Media:090816_HL006_Tracking.pdf|Tracking]]||[[Media:090816_HL006_FBase.pdf|FBase]]||[[Media:090816_HL006_Summary.pdf|Summary]]||36.55||2486386 | | 090816_HL006||[[Media:090816_HL006_Tracking.pdf|Tracking]]||[[Media:090816_HL006_FBase.pdf|FBase]]||[[Media:090816_HL006_Summary.pdf|Summary]]||36.55||2486386 | ||
|- | |- | ||
| 090819_HL007||[[Media:090819_HL007_Tracking.pdf|Tracking]]||N/A||N/A||N/A|| | | 090819_HL007||[[Media:090819_HL007_Tracking.pdf|Tracking]]||N/A||N/A||N/A||4325020 | ||
|- | |- | ||
| 090826_HL008||[[Media:090826_HL008_Tracking.pdf|Tracking]]||[[Media:090826_HL008_FBase.pdf|FBase]]||[[Media:090826_HL008_Summary.pdf|Summary]]||56.94||4113170 | | 090826_HL008||[[Media:090826_HL008_Tracking.pdf|Tracking]]||[[Media:090826_HL008_FBase.pdf|FBase]]||[[Media:090826_HL008_Summary.pdf|Summary]]||56.94||4113170 | ||
|- | |- | ||
| 090829_HL009||[[Media:090829_HL009_Tracking.pdf|Tracking]]||[[Media:090829_HL009_FBase.pdf|FBase]]||[[Media:090826_HL009_Summary.pdf|Summary]]|| | | 090829_HL009||[[Media:090829_HL009_Tracking.pdf|Tracking]]||[[Media:090829_HL009_FBase.pdf|FBase]]||[[Media:090826_HL009_Summary.pdf|Summary]]||Failed|| | ||
|- | |||
| 090911_AL001||[[Media:Tracking-AL001.pdf|Tracking]]||-||-||41.8||2135001 | |||
|- | |||
| 090918_AL002||[[Media:Tracking-AL002.pdf|Tracking]]||-||-||61.54||4,249,626 | |||
|- | |||
| 090923_AL003||[[Media:090923_AL003_Tracking.pdf|Tracking]]||[[Media:090923_AL003_FBase.pdf|FBase]]||[[Media:090923_AL003_Summary.pdf|Summary]]||75.3||5,400,896 | |||
|- | |||
| 090925_HL010||[[Media:090923_HL010_Tracking.pdf|Tracking]]||[[Media:090925_HL010_FBase.pdf|FBase]]||[[Media:090925_HL010_Summary.pdf|Summary]]||61.15||4,676,112 | |||
|- | |||
| 090929_HL011||[[Media:090929_HL011_Tracking.pdf|Tracking]]||[[Media:090929_HL011_FBase.pdf|FBase]]||[[Media:090929_HL011_Summary.pdf|Summary]]||19.14(failed)||1,484,042 | |||
|- | |||
| 090930_HL012||[[Media:090930_HL012_Tracking.pdf|Tracking]]||[[Media:090930_HL012_FBase.pdf|FBase]]||[[Media:090930_HL012_Summary.pdf|Summary]]||79.06||5598506 | |||
|- | |||
|- | |||
| 091008_HL013||[[Media:091008_HL013_Tracking.pdf|Tracking]]||[[Media:091008_HL013_FBase.pdf|FBase]]||[[Media:091008_HL013_Summary.pdf|Summary]]||61.41||4,172,506 | |||
|- | |||
|- | |||
| 091012_HL014||[[Media:091012_HL014_Tracking.pdf|Tracking]]||[[Media:091012_HL014_FBase.pdf|FBase]]||[[Media:091012_HL014_Summary.pdf|Summary]]||55.88||2,788,276 | |||
|- | |||
|- | |||
| 091015_HL015||[[Media:091015_HL015_Tracking.pdf|Tracking]]||[[Media:091015_HL015_FBase.pdf|FBase]]||[[Media:091015_HL015_Summary.pdf|Summary]]||52.03||4,521,421 | |||
|- | |||
|- | |||
| 091018_HL016||[[Media:091018_HL016_Tracking.pdf|Tracking]]||[[Media:091016_HL016_FBase.pdf|FBase]]||[[Media:091016_HL016_Summary.pdf|Summary]]||67.06||5,059,724 | |||
|- | |||
|- | |||
| 091020_HL017||[[Media:091020_HL017_Tracking.pdf|Tracking]]||[[Media:091020_HL017_FBase.pdf|FBase]]||[[Media:091020_HL017_Summary.pdf|Summary]]||68.46||5,633,145 | |||
|- | |||
|- | |||
| 091023_HL018||[[Media:091023_HL018_Tracking.pdf|Tracking]]||[[Media:091023_HL018_FBase.pdf|FBase]]||[[Media:091023_HL018_Summary.pdf|Summary]]||67.73||5,318,108 | |||
|- | |||
|- | |||
| 091026_HL019||[[Media:091026_HL019_Tracking.pdf|Tracking]]||[[Media:091026_HL019_FBase.pdf|FBase]]||[[Media:091026_HL019_Summary.pdf|Summary]]||60.57||4,205,872 | |||
|- | |||
|- | |||
| 091029_HL020||[[Media:091029_HL020_Tracking.pdf|Tracking]]||[[Media:091029_HL020_FBase.pdf|FBase]]||[[Media:091029_HL020_Summary.pdf|Summary]]||76.22||7,769,646 | |||
|- | |||
|- | |||
| 091102_HL021||[[Media:091102_HL021_Tracking.pdf|Tracking]]||[[Media:091102_HL021_FBase.pdf|FBase]]||[[Media:091102_HL021_Summary.pdf|Summary]]||Failed||Failed | |||
|- | |||
|- | |||
| 091110_HL022||[[Media:091110_HL022_Tracking.pdf|Tracking]]||-||[[Media:091110_HL022_Summary.pdf|Summary]]||68.03||5,161,713 | |||
|- | |||
|- | |||
| 091113_HL023||[[Media:091113_HL023_Tracking.pdf|Tracking]]||[[Media:091113_HL023_FBase.pdf|FBase]]||[[Media:091113_HL023_Summary.pdf|Summary]]||80.97||7,083,662 | |||
|- | |||
|- | |||
| 091119_HL024||[[Media:091119_HL024_Tracking.pdf|Tracking]]||[[Media:091119_HL024_FBase.pdf|FBase]]||[[Media:091119_HL024_Summary.pdf|Summary]]||82.8||5,046,487 | |||
|- | |||
|- | |||
| 091123_HL025||[[Media:091123_HL025_Tracking.pdf|Tracking]]||[[Media:091123_HL025_FBase.pdf|FBase]]||[[Media:091123_HL025_Summary.pdf|Summary]]||68.39||5,727,128 | |||
|- | |||
|- | |||
| 091127_HL026||[[Media:091127_HL026_Tracking.pdf|Tracking]]||[[Media:091127_HL026_FBase.pdf|FBase]]||[[Media:091127_HL026_Summary.pdf|Summary]]||82.27||7,045,934 | |||
|- | |||
|- | |||
| 091202_HL027||[[Media:091202_HL027_Tracking.pdf|Tracking]]||[[Media:091202_HL027_FBase.pdf|FBase]]||[[Media:091202_HL027_Summary.pdf|Summary]]||82.46||6,017,845 | |||
|- | |||
|- | |||
| 091206_HL028||[[Media:091206_HL028_Tracking.pdf|Tracking]]||[[Media:091206_HL028_FBase.pdf|FBase]]||[[Media:091206_HL028_Summary.pdf|Summary]]||55.12||3,446,764 | |||
|- | |||
|- | |||
| 091208_HL029||[[Media:091208_HL029_Tracking.pdf|Tracking]]||[[Media:091208_HL029_FBase.pdf|FBase]]||[[Media:091208_HL029_Summary.pdf|Summary]]||72.26||6,151,726 | |||
|- | |||
|- | |||
| 091212_AL005||[[Media:AL004_Tracking.pdf|Tracking]]||[[-]]||[[Media:AL005.pdf|Summary]]||9.94||505,765 | |||
|- | |||
| 091217_AL006||[[Media:AL006_Tracking.pdf|Tracking]]||[[Media:AL006-first base.pdf|FBase]]||[[Media:AL006.pdf|Summary]]||74.95||6566654 | |||
|- | |||
|- | |||
| 091217_AL007||[[Media:AL007_Tracking.pdf|Tracking]]||[[Media:AL007-first base.pdf|FBase]]||[[Media:AL007.pdf|Summary]]||35.92||2638947 | |||
|- | |- | ||
| | | 091217_AL008||[[Media:AL008_Tracking.pdf|Tracking]]||[[FBase]]||[[Media:091226_AL008_Summary.pdf|Summary]]||27.76||2,197,558(failed, overloaded, focusing laser) | ||
|- | |- | ||
| 091229_HL030||[[Media:091229_HL030_Tracking.pdf|Tracking]]||[[Media:091229_HL030_FBase.pdf|FBase]]||[[Media:091229_HL030_Summary.pdf|Summary]]||84.94||6,385,095 | |||
|- | |||
| | | | ||
|} | |} |
Latest revision as of 16:59, 10 October 2013
2013[edit]
Run | Tracking | 1st Cycle Report | Summary | % Good Clusters | Yield (kbases) |
130104_SN1001 | Tracking | FBase | Summary | 92.19 | 358,197,114 |
130119_HL141 | Tracking | FBase | Summary | ? | ? |
130128_HL142 | Tracking | FBase | Summary | ? | ? |
130205_MiSeqFeb5 | Tracking | FBase | Summary | ? | ? |
130207_HL143 | Tracking | FBase | Summary | ? | ? |
130219_HL144 | Tracking | FBase | Summary | ? | ? |
130227_HiSeqFeb27 | Tracking | FBase | Summary | ? | ? |
130226_HL145 | Tracking | FBase | Summary | 81% | 18,771,616 (PE 50+7+50 reads, Lane 5 overloaded) |
130306_HL146 | Tracking | FBase | Summary | 73.1% | 12,229,391 (SE 36+7 reads) |
130316_HL147 | Tracking | FBase | Summary | ? | ? |
130321_HL148 | Tracking | FBase | Summary | 82.8% | 11,624,271 |
130322_Miseq | Tracking | FBase | Summary | ? | ? |
130327_HiSeqMar27 | Tracking | FBase | Summary | ? | 31,473,118 |
130402_Miseq | Tracking | FBase | Summary | ? | ? |
130402_HL149 | Tracking | FBase | Summary | 81.3% | 13,889,196 |
130409_HL150 | Tracking | FBase | Summary | 84.5% | 14,929,290 |
130409_Miseq | Tracking | FBase | Summary | ? | ? |
130430_HL151 | Tracking | FBase | Summary | 90.93% | 11,274,256 |
130521_HL152 | Tracking | FBase | Summary | 79.85% | 14,463,774 |
130528_HL153 | Tracking | FBase | Summary | 87.97%? | 23,767,498 |
130612_HL154 | Tracking | FBase | Summary | ? | ? |
130614_Miseq | Tracking | FBase | Summary | ? | ? |
130618_Miseq | Tracking | FBase | Summary | ? | ? |
130628_HL155 | Tracking | FBase | Summary | ? | ? |
130715_HL156 | Tracking | FBase | Summary | ? | ? |
130807_HL157 | Tracking | FBase | Summary | ? | ? |
130812_HL158 | Tracking | FBase | Summary | ? | ? |
130903_HL159 | Tracking | FBase | Summary | ? | ? |
130917_HL160 | Tracking | FBase | Summary | ? | ? |
131009_HL161 | Tracking | FBase | Summary | ? | ? |
2012[edit]
Run | Tracking | 1st Cycle Report | Summary | % Good Clusters | Yield (kbases) |
120125_HL113 | Tracking | FBase | Summary | 69.61 | 22900852 (First attempt failed, probably due to bad reagents. The second one was better. However, lane 7&8 still have very poor quality.) |
120209_HiseqFeb09 | Tracking | FBase | Summary | ? | 382,585,278 (@ BioGem) |
120210_HL114 | Tracking | FBase | Summary | 79.14 | 25,971,886 |
120217_HL115 | Tracking | FBase | Summary | ? | Read 2 Failed, Rehyb unsuccessful, Received illumina replacement |
120313_HiseqMar13 | Tracking | FBase | Summary | 92.95 | 318,641,613 |
120317_HL116 | Tracking | FBase | Summary | ? | ? |
120412_HL117 | Tracking | FBase | Summary | ? | ? Read 2 Failed kits replaced |
120426_HL118 | Tracking | FBase | Summary | ? | ~50Gb |
120503_HiseqMay04 | Tracking | FBase | Summary | 95.47 | 291,670,307 |
120510_HiseqMay10 | Tracking | FBase | Summary | 93.34 | 347,495,254 |
120525_HiseqMay25 | Tracking | FBase | Summary | 81.77% | 260,691,319 |
120519_HL119 | Tracking | FBase | Summary | 55.5% | 12,262,059 |
120531_HiseqMay31 | Tracking | FBase | Summary | 90.53% | 408,717,804 |
120531_HL120 | Tracking | FBase | Summary | ? | ? |
120608_HiseqJun08 | Tracking | FBase | Summary | 96.99% | 172,621,300 |
120702_HL124 | Tracking | FBase | Summary | 88.08 | 33,307,344
Intensities low for read 3 terminate run early at cycle 168 |
120712_HL125 | Tracking | FBase | Summary | 79.12 | 16,601,513 |
120711_HiSeqJul11 | Tracking | FBase | Summary | 94.06 | 301,875,173 |
120716_HL126 | Tracking | FBase | Summary | 80.65 | 11,488,063 |
120727_HL127 | Tracking | FBase | Summary | 85.67 | 28,477,248 |
120807_HL128 | Tracking | FBase | Summary | 88.52 | 14,546,195 |
120818_HL129 | Tracking | FBase | Summary | 74.32 | 15,944,231 |
120828_HiSeqAug28 | Tracking | FBase | Summary | 90.41 | 320,114,704 |
120906_DD004 | Tracking | FBase | Summary | 68.85 | 9,553,625(s1,s2,s3 were underloaded, s8 no cluster) |
120917_HL130 | Tracking | FBase | Summary | 80.49 | 6,971,676 (s8 no cluster, replacement received for both runs) |
121004_HL131 | Tracking | FBase | Summary | 88.95 | 9,465,433 |
121017_HL132 | Tracking | FBase | Summary | 88.01 | 9,615,198 |
121026_HL133 | Tracking | FBase | Summary | 88.45 | 33,030,297 |
121101_HL134 | Tracking | FBase | Summary | 89.09 | 13,324,015 |
121108_HL135 | Tracking | FBase | Summary | 82.61 | 25,068,908 (s7 no cluster, line clogged?, replacement received) |
121108_HiSeqNov8 | Tracking | FBase | Summary | ? | ? |
121120_HL136 | Tracking | FBase | Summary | 57.82 | 8,626,041 (s1-s7of HL135 & s2 no visible clusters, library issue?) |
121130_HL137 | Tracking | FBase | Summary | ? | ? (s1 no clusters, s2 primer lawn issue, FC reimbursed) |
121210_HL137_2 | Tracking | FBase | Summary | 75.4 | 9,607,022 |
121214_HL138 | Tracking | FBase | Summary | ? | ? |
121218_HL139 | Tracking | FBase | Summary | ? | ? |
121222_HL140 | Tracking | FBase | Summary | ? | ?(read1 rehyb, 2x36sbs kits replaced) |
2011[edit]
Run | Tracking | 1st Cycle Report | Summary | % Good Clusters | Yield (kbases) |
110112_HL086 | Tracking | FBase | Summary | 90.6 | 27,432,853 |
110119_HL087 | Tracking | FBase | Summary | 85.44 | 48,665,171 |
110303_HL088 | Tracking | FBase | Summary | 79.01 | 23,332,319 |
110307_HL089 | Tracking | FBase | Summary | 87.23 | 48,487,197 |
110318_HL090 | Tracking | FBase | Summary | 80.98 | 23,299,776 |
110323_HL091 | Tracking | FBase | Summary | 83 | 29,265,834 |
110408_HL092 | Tracking | FBase | Summary | 81.22 | 12,957,480 |
110417_HL093 | Tracking | FBase | Summary | 83.85 | 19,081,551 |
110513_HL094 | Tracking | FBase | Summary | 80.27 | 77,575,532 |
110608_HL095 | Tracking | FBase | Summary | 82 | 24,590,778 |
110619_HL096 | Tracking | FBase | Summary | 85.84 | 27,172,886 (2nd reads failed) |
110626_HL097 | Tracking | FBase | Summary | 78.6 | 25,943,849 (Repeat of HL096) |
110714_HL098 | Tracking | FBase | Summary | 85.93 | 51,666,958 |
110726_HL099 | Tracking | FBase | Summary | 74 | 14,508,606 |
110811_HL100 | Tracking | FBase | Summary | 74 | 8,597,569 |
110902_HL101 | Tracking | FBase | Summary | 75 | 15,810,995 |
110907_HL102 | Tracking | FBase | Summary | 65.47 | 9,448,824 |
110923_HL103 | Tracking | FBase | Summary | 58.64 | 15,816,673 |
110929_SN1001(HiSeq) | Tracking | FBase | Summary | 90.39 | 366,883,826 |
111013_HL105 | Tracking | FBase | Summary | 80.5 | 30,080,124 |
111019_HL106 | Tracking | FBase | Summary | ? | ? |
111030_HL107 | Tracking | FBase | Summary | 65.5 | 15,508,439 |
111109_HL108 | Tracking | FBase | Summary | 63.4 | 7,910,991 |
111112_HL109 | Tracking | FBase | Summary | 78.2 | 54,405,997 |
111124_HL110 | Tracking | FBase | Summary | 78.23 | 54,405,997 (very low quality for 2nd end) |
111207_HL111 | Tracking | FBase | Summary | 86.98 | 391,944,270 (HiSeq PE110) |
111222_HL112 | Tracking | FBase | Summary | ? | Run failed,cracked manifold, kits replaced by illumina |
2010[edit]
Run | Tracking | 1st Cycle Report | Summary | % Good Clusters | Yield (kbases) |
100101_HL031 | Tracking | FBase | Summary | ? | Failed, overloaded, focusing laser |
100105_HL032 | Tracking | FBase | Summary | 61.24 | 2,940,492 |
100113_HL033 | Tracking | FBase | Summary | ? | ? |
100117_HL034 | Tracking | FBase | Summary | 72.28 | 6,896,056 |
100123_HL035 | Tracking | FBase | Summary | 74,49 | 9,045,278 |
100127_HL036 | Tracking | FBase | Summary | 69.07 | 7,518,218 |
100221_HL037 | Tracking | FBase | Summary | 51.39 | 5,993,304 |
100207_HL038 | Tracking | FBase | Summary | 82.62 | 11,587,982 |
100212_HL039 | Tracking | FBase | Summary | 53.7 | 5,163,203 |
100219_HL040 | Tracking | FBase | Summary | 59.35 | 6,091,535 |
100226_HL041 | Tracking | FBase | Summary | 71.02 | 11,153,313 |
100303_HL042 | Tracking | FBase | Summary | 68.17 | 7,113,883 |
100305_HL043 | Tracking | FBase | Summary | 61.8 | 8,949,130 |
100309_HL044 | Tracking | FBase | Summary | 73.91 | 6,019,006 |
100312_HL045 | Tracking | FBase | Summary | 81.68 | 14,577,361 |
100318_HL046_2 | Tracking | FBase | Summary | 13 | Failed(focusing??) |
100318_HL046_3 | Tracking | FBase | Summary | 36.4 | 3,481,844(overloaded) |
100326_HL047 | Tracking | FBase | Summary | 80.56 | 15,102,359 |
100329_HL048 | Tracking | FBase | Summary | 76.02 | 6,467,724(38bp,wrong flowcell orientation) |
100329_HL048_repeat | Tracking | FBase | Summary | 80.94 | 16,728,503 |
100329_DD001 | Tracking | FBase | Summary | ? | Ran 4 complete cycles, ended because of low quality and intensity |
100329_DD001_repeat | Tracking | FBase | Summary | 87.04 | 5,765,966(flowcell underloaded) |
100411_HL049_2 | Tracking | FBase | Summary | 71.04 | 8,624,535(defective primer lawn) |
100415_HL050 | Tracking | FBase | Summary | 83.14 | 13,132,725 |
100420_HL051 | Tracking | FBase | Summary | 89.86 | 2,839,513 |
100424_DD002 | Tracking | FBase | Summary | Ran 24 cycles, Scott said software restarts at 25th and 50th cycles, and was a connection problem regarding problem with re-accessing the recipe file (primary Run folder was stored in network drive instead of D drive. Intensities were low (below 2000 for all lanes), probably due to using primers not from Illumina. | |
100425_DD002_reprimed | Tracking | FBase | Summary | Reprimed with standard Illumina primers. | |
100429_HL052 | Tracking | FBase | Summary | 85.95 | 1,175,185 |
100503_HL053 | Tracking | FBase | Summary | 80.52 | 31,007,707 |
100514_HL054 | Tracking | FBase | Summary | 89.93 | 32,835,688 |
100523_HL055 | Tracking | FBase | Summary | 83.12 | 15775525(2nd reads failed, low intensity) |
100601_HL056 | Tracking | FBase | Summary | 84.17 | 17,156,595 |
100605_HL057 | Tracking | FBase | Summary | 88.53 | 6,862,886 |
100612_HL058 | Tracking | FBase | N/A | N/A | Overloading and Low Cluster Density |
100615_HL058_2 | Tracking | FBase | Summary | 62.83 | 5,242,825 |
100623_HL059 | Tracking | FBase | N/A | ? | Failed (Low Cluster Density) |
100627_HL060 | Tracking | FBase | Summary | ? | ? |
100630_HL061 | Tracking | FBase | Summary | ? | Stopped due to low number of clusters |
100701_HL061_2 | Tracking | FBase | Summary | ? | Defected flowcell |
100703_HL061_3 | Tracking | FBase | Summary | 89.5 | 11,854,572 |
100707_HL062 | Tracking | FBase | Summary | 91.52 | 5,171,211 |
100713_HL063 | Tracking | FBase | Summary | 91.19 | 12,767,919 |
100717_HL064 | Tracking | FBase | Summary | 87.4 | 11,306,633 |
100721_HL065 | Tracking | FBase | Summary | 87.48 | 12,959,289 |
100726_HL066 | Tracking | FBase | Summary | 61.5 | 9,875,407 (Low yield due to bad focusing, mainly on lane 5) |
100802_HL067 | Tracking | FBase | Summary | 64.16 | 5,816,951 (Overloaded lane 1 & 2 due to underestimation of library concentration) |
100807_HL068 | Tracking | FBase | Summary | 87.07 | 10,732,349 |
100814_HL069 | Tracking | FBase | Summary | 77.39 | 8,878,272 |
100817_HL070 | Tracking | FBase | Summary | 90.53 | 10,797,519 |
100825_HL071 | Tracking | FBase | Summary | 83.15 | 11,955,485 |
100913_HL072 | Tracking | FBase | Summary | 86.49 | 4,533,300 (No Clusters on lane 7 & 8) |
100917_HL073 | Tracking | FBase | Summary | 86.46 | 6,258,409 |
100921_HL074 | Tracking | FBase | Summary | 81.22 | 10,415,353 |
100925_HL075 | Tracking | FBase | Summary | 80.98 | 29,364,373 |
101006_HL076 | Tracking | FBase | Summary | 87.84 | 8,005,306 |
100810_DD003 | Tracking | FBase | Summary | 89.08 | 12821744 |
100812_AL009 | Tracking | FBase | Summary | 86.91 | 15,843,582 |
101016_HL077 | Tracking | FBase | Summary | 86.02 | 16,771,454 |
101021_HL078 | Tracking | FBase | Summary | ? | ? |
101026_HL079 | Tracking | FBase | Summary | 61.61 | 12,414,871 |
101030_HL080 | Tracking | FBase | Summary | 78.26 | 13,909,754 |
101108_HL081 | Tracking | FBase | Summary | 86.06 | 43,250,579 |
101117_HL082 | Tracking | FBase | Summary | 81.99 | 19,504,189 |
101123_HL083 | Tracking | FBase | Summary | 87.92 | 45,478,237 |
101203_HL084 | Tracking | FBase | Summary | 87.07 | 21,585,694 |
101209_HL085 | Tracking | FBase | Summary | 86.69 | 45,305,249 |
2009[edit]
Run | Tracking | 1st Cycle Report | Summary | % Good Clusters | Yield (kbases) |
090721_PhiX_Test_Run | Tracking | FBase | Summary | 81.13 | 3892642 |
090724_HL001 | Tracking | FBase | Summary | 68.99 | 1729242 |
090728_HL002 | Tracking | FBase | Summary | 67.11 | 3731327 |
090805_HL003 | Tracking | FBase | Summary | 45.69 | 3159793 |
090809_HL004 | Tracking | FBase | Summary | 78.26 | 5806800 |
090813_HL005 | Tracking | FBase | Summary | 38.78 | 2159875 |
090816_HL006 | Tracking | FBase | Summary | 36.55 | 2486386 |
090819_HL007 | Tracking | N/A | N/A | N/A | 4325020 |
090826_HL008 | Tracking | FBase | Summary | 56.94 | 4113170 |
090829_HL009 | Tracking | FBase | Summary | Failed | |
090911_AL001 | Tracking | - | - | 41.8 | 2135001 |
090918_AL002 | Tracking | - | - | 61.54 | 4,249,626 |
090923_AL003 | Tracking | FBase | Summary | 75.3 | 5,400,896 |
090925_HL010 | Tracking | FBase | Summary | 61.15 | 4,676,112 |
090929_HL011 | Tracking | FBase | Summary | 19.14(failed) | 1,484,042 |
090930_HL012 | Tracking | FBase | Summary | 79.06 | 5598506 |
091008_HL013 | Tracking | FBase | Summary | 61.41 | 4,172,506 |
091012_HL014 | Tracking | FBase | Summary | 55.88 | 2,788,276 |
091015_HL015 | Tracking | FBase | Summary | 52.03 | 4,521,421 |
091018_HL016 | Tracking | FBase | Summary | 67.06 | 5,059,724 |
091020_HL017 | Tracking | FBase | Summary | 68.46 | 5,633,145 |
091023_HL018 | Tracking | FBase | Summary | 67.73 | 5,318,108 |
091026_HL019 | Tracking | FBase | Summary | 60.57 | 4,205,872 |
091029_HL020 | Tracking | FBase | Summary | 76.22 | 7,769,646 |
091102_HL021 | Tracking | FBase | Summary | Failed | Failed |
091110_HL022 | Tracking | - | Summary | 68.03 | 5,161,713 |
091113_HL023 | Tracking | FBase | Summary | 80.97 | 7,083,662 |
091119_HL024 | Tracking | FBase | Summary | 82.8 | 5,046,487 |
091123_HL025 | Tracking | FBase | Summary | 68.39 | 5,727,128 |
091127_HL026 | Tracking | FBase | Summary | 82.27 | 7,045,934 |
091202_HL027 | Tracking | FBase | Summary | 82.46 | 6,017,845 |
091206_HL028 | Tracking | FBase | Summary | 55.12 | 3,446,764 |
091208_HL029 | Tracking | FBase | Summary | 72.26 | 6,151,726 |
091212_AL005 | Tracking | - | Summary | 9.94 | 505,765 |
091217_AL006 | Tracking | FBase | Summary | 74.95 | 6566654 |
091217_AL007 | Tracking | FBase | Summary | 35.92 | 2638947 |
091217_AL008 | Tracking | FBase | Summary | 27.76 | 2,197,558(failed, overloaded, focusing laser) |
091229_HL030 | Tracking | FBase | Summary | 84.94 | 6,385,095 |