Chris Wei: Difference between revisions

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*[[Chris:LabNotes/Microbiome|Microbiome Project]]
=Projects=
*[[Chris:Presentations|Lab Meeting Presentations]]
*[[Chris:LabNotes/Microbiome|Microbiome (2010-2013)]]
*[[Chris:LabNotes/MIDAS|MIDAS (2013-2014)]]
*[[Chris:LabNotes/Moleculo|Moleculo (2013-2014)]]
*[[Chris:LabNotes/Hg19Haplotyping|Haplotyping (2014)]]
*[[Chris:LabNotes/SeaMicrobiome|Sea Microbiome (2015)]]
*[[Chris:LabNotes/FateMapping|Phylogenetic Fate Mapping (2014-16)]]
*[[Chris:LabNotes/MSI|Microsatellite Instability (2016-2017)]]
*[[Chris:LabNotes/MolecularBarcoding|Molecular Barcoding (2016)]]
*[[Chris:LabNotes/sci-Methyl_Seq|sci-Methyl_Seq (2017)]]
 
=General Protocols=
[[Media:chris_protocol_Bead_Purification.docx| Bead Purification]]
 
[[Media:chris_protocol_Ethanol_Precipitation.docx| Ethanol Precipitation]]
 
[[Media:chris_protocol_Qubit_Quantification_Protocol.docx| QUBIT Quantification]]
 
[[Media:chris_protocol_Pacbio_Library_Construction_Protocol_Updated.docx| Pacbio Library Construction]]
 
[[Chris:LabNotes/General_Protocols/BaseCalling_Procedure|Illumina Demultiplexing]]
 
[[Chris:LabNotes/General_Protocols/genome-miner_restart|Genome-miner Restart/Mount]]
 
[[Chris:LabNotes/General_Protocols/Electroporation|E. coli Electroporation]]
 
=Lab Meeting Presentations=
[[Media:De_novo_sequencing_of_the_microbial_genome_Lab_Meeting_Presentation.pdf|Lab Meeting 8/11/2010]]
Progress Report: Microbial Genome Project
 
[[Media:One_Bacteria_Cell,_One_Complete_Genome_Presentation.pdf| Lab Meeting 9/19/2010]]
Journal Club: One Bacteria Cell, One Complete Genome
 
[[Media:chris_Lab_Meeting_2_25_2011.pdf| Lab Meeting 2/25/2011]]
Progress Report: Limited MDA
 
[[Media:3_4_2011_Metagenomic_Discovery_of_Biomass-Degrading_Genes_and_Genomes_from_Cow_Rumen_Presentation.pptx| Lab Meeting 3/4/2011]]
Journal Club: Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen
 
[[Media:Chris_Progress_Report_5_25_2011.pptx| Lab Meeting 5/25/2011]]
Progress Report: Sequence Binning and Slide Cut
 
[[Media:Chris_Journal_Club_6_3_2011.pptx| Lab Meeting 6/3/2011]]
Journal Club: Genome of a Low-Salinity Ammonia-Oxidizing Archaeon Determined by Single-Cell and Metagenomic Analysis
 
[[Media:Chris_Wei_Journal_Club_1_23_2012.pptx| Lab Meeting 1/23/2012]]
Journal Club: Digital MDA for enumeration of total nucleic acid contamination
 
[[Media:Chris_Wei_Progress_Update_4_11_2012.pptx| Lab Meeting 4/11/2012]]
Progress Report: Single Cell + Metagenomics Hybrid Assembly
 
[[Media:chris_Lab_Meeting_5_30_2012.pptx| Lab Meeting 5/30/2012]]
Progress Report: Pacbio Sequencing
 
[[Media:chris_Lab_Meeting_6_18_2013.pptx| Lab Meeting 6/18/2013]]
Progress Report: Moleculo Sequencing
 
[[Media:chris_Illumina_Meeting_8_9_2013.pptx| Illumina Meeting 8/9/2013]]
Update on Oncomelania Moleculo Sequencing
 
[[Media:chris_Lab_Meeting_9_3_2013.pptx| Lab Meeting 9/3/2013]]
Progress Report: Moleculo Sequencing
 
[[Media:chris_Lab_Meeting_11_21_2013.pdf| Lab Meeting 11/21/2013]]
Progress Report: South Pacific Gyre Bacteria
 
[[Media:chris_Lab_Meeting_01_14_2014.pptx| Lab Meeting 1/14/2014]]
Progress Report: Moleculo Sequencing
 
[[Media:cw_Lab_Meeting_2_7_2014_Malaria_Single_Cell_Isolation.pptx| Meeting with Winzeler Lab 2/27/2014]]
Progress Report: Malaria Single Cell Identification
 
[[Media:cw_Lab_Meeting_03_03_2014.pptx| Lab Meeting 3/3/2014]]
Progress Report: Malaria Single Cell Identification
 
[[Media:cw_Lab_Meeting_05_01_2014_Phylogenetic_Fate_Mapping.pdf | Lab Meeting 5/1/2014]]
Progress Report: Phylogenetic Fate Mapping
 
[[Media:cw_2014_07_01_Lab_Meeting_Phylogenetic_Fate_Mapping_Update.pptx | Lab Meeting 7/1/2014]]
Progress Report: Phylogenetic Fate Mapping Update
 
[[Media:cw_2014_08_26_Lab_Meeting_Phylogenetic_Fate_Mapping_Update.pptx | Lab Meeting 8/26/2014]]
Progress Report: Phylogenetic Fate Mapping Update
 
[[Media:2014_10_20_Lab_Meeting_Phylogenetic_Fate_Mapping_Update.pptx | Lab Meeting 10/20/2014]]
Progress Report: Phylogenetic Fate Mapping Update
 
[[Media:cw_2015_01_30_Lab_Meeting_Phylogenetic_Fate_Mapping_Update.pptx | Lab Meeting 1/30/2015]]
Progress Report: Phylogenetic Fate Mapping Update
 
[[Media:cw_2015_03_15_Lab_Meeting_Phylogenetic_Fate_Mapping.pptx | Lab Meeting 3/15/2015]]
Progress Report: Phylogenetic Fate Mapping Update

Latest revision as of 20:52, 21 April 2017

Projects[edit]

General Protocols[edit]

Bead Purification

Ethanol Precipitation

QUBIT Quantification

Pacbio Library Construction

Illumina Demultiplexing

Genome-miner Restart/Mount

E. coli Electroporation

Lab Meeting Presentations[edit]

Lab Meeting 8/11/2010 Progress Report: Microbial Genome Project

Lab Meeting 9/19/2010 Journal Club: One Bacteria Cell, One Complete Genome

Lab Meeting 2/25/2011 Progress Report: Limited MDA

Lab Meeting 3/4/2011 Journal Club: Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen

Lab Meeting 5/25/2011 Progress Report: Sequence Binning and Slide Cut

Lab Meeting 6/3/2011 Journal Club: Genome of a Low-Salinity Ammonia-Oxidizing Archaeon Determined by Single-Cell and Metagenomic Analysis

Lab Meeting 1/23/2012 Journal Club: Digital MDA for enumeration of total nucleic acid contamination

Lab Meeting 4/11/2012 Progress Report: Single Cell + Metagenomics Hybrid Assembly

Lab Meeting 5/30/2012 Progress Report: Pacbio Sequencing

Lab Meeting 6/18/2013 Progress Report: Moleculo Sequencing

Illumina Meeting 8/9/2013 Update on Oncomelania Moleculo Sequencing

Lab Meeting 9/3/2013 Progress Report: Moleculo Sequencing

Lab Meeting 11/21/2013 Progress Report: South Pacific Gyre Bacteria

Lab Meeting 1/14/2014 Progress Report: Moleculo Sequencing

Meeting with Winzeler Lab 2/27/2014 Progress Report: Malaria Single Cell Identification

Lab Meeting 3/3/2014 Progress Report: Malaria Single Cell Identification

Lab Meeting 5/1/2014 Progress Report: Phylogenetic Fate Mapping

Lab Meeting 7/1/2014 Progress Report: Phylogenetic Fate Mapping Update

Lab Meeting 8/26/2014 Progress Report: Phylogenetic Fate Mapping Update

Lab Meeting 10/20/2014 Progress Report: Phylogenetic Fate Mapping Update

Lab Meeting 1/30/2015 Progress Report: Phylogenetic Fate Mapping Update

Lab Meeting 3/15/2015 Progress Report: Phylogenetic Fate Mapping Update