Jeff:LabNotes/Hi Seq 9/12/12: Difference between revisions

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== '''Hi Seq Run: SN1001''' ==
*Data in/home/kunzhang/seqStore/120906_SN1001/Jeff
*Assemblies in ~/JG_Ext12T/SN1001_Hiseq/assembly/Indx*  (Indx 38 assembly just in assembly folder)
*Used kmer=21 in Velvet_SC with Euler_EC
{| {{table}}
{| {{table}}
| align="center" style="background:#f0f0f0;"|'''Lane 4'''
 
| align="center" style="background:#f0f0f0;"|'''''
 
|'''Lane 4'''
|-
|-
| '''Index'''||'''type'''
| '''Index'''||'''type'''
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| '''Lane 5'''||
| '''Lane 5'''||
|-
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| '''Index'''||"'Type'''
| '''Index'''||'''Type'''
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| 27||sea
| 27||sea

Latest revision as of 04:44, 22 September 2012

Hi Seq Run: SN1001[edit]

  • Data in/home/kunzhang/seqStore/120906_SN1001/Jeff
  • Assemblies in ~/JG_Ext12T/SN1001_Hiseq/assembly/Indx* (Indx 38 assembly just in assembly folder)
  • Used kmer=21 in Velvet_SC with Euler_EC
Lane 4
Index type
37 skin
38 skin
27 sea
31 chr
32 chr
33 neu
34 neu
35 nn
36 nn
42 chr
45 neu
46 neu
Lane 5
Index Type
27 sea
30 ch
31 neu
32 neu
33 nn
34 nn
39 skin
40 sea
47 nn
48 nn