Main Page: Difference between revisions

From ZhangLabWiki
Jump to navigation Jump to search
>Alan6017518
No edit summary
 
(68 intermediate revisions by 10 users not shown)
Line 1: Line 1:
=E-notes - Zhang Laboratory=
<strong>MediaWiki has been installed.</strong>
===Lab Meeting Schedule===
* [https://spreadsheets.google.com/ccc?key=0ApnKSQ9Jqu6_dHJGMDYtLVM0ZnlaVGZGSGFJOUpWYWc&hl=en&authkey=CJ-PyKQC Lab Meeting Calendar]


===Lab Purchase===
Consult the [https://www.mediawiki.org/wiki/Special:MyLanguage/Help:Contents User's Guide] for information on using the wiki software.
* https://docs.google.com/spreadsheet/ccc?key=0AhUen634IYdSdHRLYjBZWmNIMS1ybmdZZEZJbkdwamc&hl=en_US&pli=1#gid=17 Lab Ordering Form]
*[https://docs.google.com/spreadsheet/ccc?key=0AhUen634IYdSdDEtbnF3WVlheG8xd19DYnh0NjdoWGc Primer Ordering Form]


===Investigators===
== Getting started ==
* [[Kun_Zhang|Kun Zhang]]
* [https://www.mediawiki.org/wiki/Special:MyLanguage/Manual:Configuration_settings Configuration settings list]
* [[Alice Li|Alice Li]]
* [https://www.mediawiki.org/wiki/Special:MyLanguage/Manual:FAQ MediaWiki FAQ]
* [[Athurva Gore|Athurva Gore]]
* [https://lists.wikimedia.org/postorius/lists/mediawiki-announce.lists.wikimedia.org/ MediaWiki release mailing list]
* [[Alan Fung|Alan Fung]]
* [https://www.mediawiki.org/wiki/Special:MyLanguage/Localisation#Translation_resources Localise MediaWiki for your language]
* [[Jeff Gole|Jeff Gole]]
* [https://www.mediawiki.org/wiki/Special:MyLanguage/Manual:Combating_spam Learn how to combat spam on your wiki]
* [[Sam Chiang|Sam Chiang]]
* [[Dinh Diep|Dinh Diep]]
* [[Chris Wei|Chris Wei]]
* [[Nongluk (Noi) Plongthongkum|Nongluk (Noi) Plongthongkum]]
* [[Rui Liu|Rui Liu]]
* [[Brandon Sos|Brandon Sos]]
* [[Tina Lo|Tina Lo]]
* [[Matthew Cai|Matt Cai]]
* [[Andrew_Richards|Andrew Richards]]
 
===Alumni===
* [[Jie Deng|Jie Deng]]
* [[Ylaine Gerardin|Ylaine Gerardin]]
* [[Kyle Brubaker|Kyle Brubaker]]
* [[Robert Shoemaker|Robert Shoemaker]]
* [[Andy Chen|Andy Chen]]
 
===Sample record===
* [https://docs.google.com/spreadsheet/ccc?key=0ApnKSQ9Jqu6_dDBjUFFCYWt4S0xQZWhZVUZqYS1WdEE&hl=en#gid=11| Sequencing Samples]
* [[GA record|GA record]]
* [[Sample record|Sample record]]
* [[HUES | hES cell information]]
 
===Lab business===
* [[How to start in Zhang Lab| How to start in the Zhang Lab? Wiki and beyond. New member must read.]]
* [https://spreadsheets.google.com/ccc?key=0ApnKSQ9Jqu6_dHJGMDYtLVM0ZnlaVGZGSGFJOUpWYWc&authkey=CJ-PyKQC&hl=en#gid=0 Lab meeting calendar]
* [[Grant_proposals |Grant proposals.]]
* [[Lab_jobs|Lab jobs.]]
* [[Lab_IT|Lab's computational resources]]
* [[Illumina_GA|Information on Illumina sequencing.]]
 
===Lab Safety Information===
*If you are new to the lab, please fill out [http://www-ehs.ucsd.edu/lab/new_worker_checklist.doc New Worker Checklist]
*For annual refresher training:
*go to [http://uclearning.ucsd.edu UC learning Center]
#Login via Single Sign on or Active directory (your UCSD email user name only and password)
#Search for “IIPP”
#Click on "ANNUAL HAZARDOUS MATERIALS TRAINING"
#Click "Start" to complete the training
#Please print out the copy of your certificate after you are done
 
===Some handy tools===
* [http://excel2wiki.net/ SMD's Excel-to-Wiki Converter]
*[http://de.wikipedia.org/w/index.php?title=Wikipedia:Helferlein/VBA-Macro_for_EXCEL_tableconversion&action=edit&section=9 VBA-Macro for EXCEL tableconversion Instructions]
*[http://de.wikipedia.org/wiki/Wikipedia:Textverarbeitung/EXCEL-2003_Tabellenumwandlung_VBA VBA-Macro for EXCEL tableconversion ]
* [http://arep.med.harvard.edu/kzhang/cgi-bin/myOligoTm.cgi  Kun's Oligo Tm Calculator]
* [http://genome-tech.ucsd.edu/LabNotes/GeneTool.zip GeneTool]
* [http://genome-tech.ucsd.edu/LabNotes/SeqScannerInstall.exe ABI SeqScanner]
* [http://genome-tech.ucsd.edu/LabNotes/PeakPicker.jar PeakPicker]
* [http://genome-tech.ucsd.edu/public/share/SSHSecureShellClient-3.2.9.exe SSHSecureShell]
* [http://arep.med.harvard.edu/kzhang/cgi-bin/primer3_www.cgi Kun's version of Primer3]
* [[Circos]]
* [[SNS|CNV calling on single-cell sequencing data.]]
 
===[[Lab Protocols|Common lab protocols.]]===
===[[epMotion]]===
===[[How to write manuscript]]===
 
===About wiki===
* [http://www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]
* [http://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]
* [http://www.shawndouglas.com/wikifarm/ Wiki admin information]
__NOTOC__

Latest revision as of 05:03, 4 December 2024

MediaWiki has been installed.

Consult the User's Guide for information on using the wiki software.

Getting started[edit]