Jie:LabNotes/CpgSeq/2009-8-4: Difference between revisions
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>Jie deng (New page: ==SNP_ASM analysis in different tissue types== ===SNP_ASM analysis in three cell types derived from one denor=== The input file from expresso.chem.ucsd.edu/kunpaired/SNPOLD/[[Media:SNP_A...) |
>Jie deng No edit summary |
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The code is [[Media:SNP_ASM_PGP1.txt|SNP_ASM_PGP1]] | The code is [[Media:SNP_ASM_PGP1.txt|SNP_ASM_PGP1]] | ||
The output file is [[Media:SNP_ASM_PGP1_3_cell.txt|SNP_ASM_PGP1_3_cell]] | The output file is [[Media:SNP_ASM_PGP1_3_cell.txt|SNP_ASM_PGP1_3_cell]] | ||
===SNP_ASM analysis in 4 fibroblast cell lines=== | |||
The input file is PGP1F, IMR90, BJ, hFib2. | |||
[[Media:SNP_ASM_fibroblast.txt|SNP_ASM_fibroblast]] | |||
output file [[Media:SNP_ASM_4_fibroblast.txt|SNP_ASM_4_fibroblast]] |
Latest revision as of 01:21, 5 August 2009
SNP_ASM analysis in different tissue types[edit]
SNP_ASM analysis in three cell types derived from one denor[edit]
The input file from expresso.chem.ucsd.edu/kunpaired/SNPOLD/SNP_ASM_PGP1L, SNP_ASM_PGP1F, SNP_ASM_PGP1iPS. The code is SNP_ASM_PGP1 The output file is SNP_ASM_PGP1_3_cell
SNP_ASM analysis in 4 fibroblast cell lines[edit]
The input file is PGP1F, IMR90, BJ, hFib2. SNP_ASM_fibroblast output file SNP_ASM_4_fibroblast