Nongluk (Noi) Plongthongkum: Difference between revisions
Jump to navigation
Jump to search
>Noi No edit summary |
>Noi No edit summary |
||
Line 6: | Line 6: | ||
*** BSPP capture: [[http://genome-tech.ucsd.edu/LabNotes/index.php/Noi/NOTES/2011-8-14]] | *** BSPP capture: [[http://genome-tech.ucsd.edu/LabNotes/index.php/Noi/NOTES/2011-8-14]] | ||
*** Sample identity check by Dinh (checked after combining three batches of sequencing data): | *** Sample identity check by Dinh (checked after combining three batches of sequencing data): | ||
**** Homozygous SNPs and heterozygous SNPs call for X chromosome: [[http://genome-tech.ucsd.edu/LabNotes/index.php/Dinh_2011/NOTES/2011-11-28]] | **** Homozygous SNPs and heterozygous SNPs call for X chromosome to identify males vs. females: [[http://genome-tech.ucsd.edu/LabNotes/index.php/Dinh_2011/NOTES/2011-11-28]] | ||
**** Genetic distance: [[http://genome-tech.ucsd.edu/LabNotes/index.php/File:UCLA_GeneticDistance.pdf]] | **** Genetic distance: [[http://genome-tech.ucsd.edu/LabNotes/index.php/File:UCLA_GeneticDistance.pdf]] | ||
*** Mid-parent offspring (mpo) analysis | *** Mid-parent offspring (mpo) analysis |
Revision as of 17:38, 21 March 2012
Current Projects
- Targeted bisulfite sequencing
- Lab Note: [[1]]
- Schizophrenia (UCLA, Roel Ophoff):
- Geographic Astrophy (GA) (UCSD, Kang Zhang) Note: most of the data analysis was performed by Dr. Zhang and Dinh
- HAPMAP project (HAPMAP PT01, two families, 1362 and 1464)
- BSPP capture:
- ASM analysis:
- Randomly tagging primers (with Athurva and Dinh)