Rui:Data Analysis: Difference between revisions

From ZhangLabWiki
Jump to navigation Jump to search
>RuiLiu
>RuiLiu
Line 18: Line 18:
*[[Rui:Hap analysis on HL108|Hap analysis on HL108]]
*[[Rui:Hap analysis on HL108|Hap analysis on HL108]]
*[[Rui:RNAseq analysis on HL109|RNAseq analysis on HL109]]
*[[Rui:RNAseq analysis on HL109|RNAseq analysis on HL109]]
*[[Rui:DNAseq analysis on HL114|DNAseq analysis on HL114]]


==RNAseq analysis key notes==
==RNAseq analysis key notes==

Revision as of 18:29, 9 March 2012

Examples

Jeff's samples:
Kun:LabNotes/Haplotyping/2010-9-17 [1]
Transcriptome:
Kun:LabNotes/SingleCellExpr/2011-6-13 [2]
Haplotyping:
Kun:LabNotes/Haplotyping/2011-6-14 [3]

Data analysis

RNAseq analysis key notes

  • iGenome packages [4]
  1. UCSC genome package: [5]
  2. Ensemble genome package: [6]
  • Comparison of RNAseq analysis programs: [7]