Matthew Cai: Difference between revisions
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*[[Matt:LabNotes/exonProbeDesign|Padlock Probe Design]] | *[[Matt:LabNotes/exonProbeDesign|Padlock Probe Design]] | ||
*[[Matt:LabNotes/Probe Production and Capture|Probe Production and Capture]] | *[[Matt:LabNotes/Probe Production and Capture|Probe Production and Capture]] | ||
*[[Matt:LabNotes/MiSeq_130325 Analysis|MiSeq_130325 Analysis]] | *[[Matt:LabNotes/MiSeq_130325 Analysis|CA12k Capture (MiSeq_130325) Analysis]] | ||
*[[Matt:LabNotes//2013-7-26#Analysis_of_HL152:_Representation_Bias_of_CA12k_Oligos_(Corrected)|CA12k End Sequencing (HL152_130524) Analysis]] | |||
==Notebook== | ==Notebook== |
Revision as of 04:49, 1 August 2013
Projects
in Situ Sequencing
- Padlock Probe Design
- Probe Production and Capture
- CA12k Capture (MiSeq_130325) Analysis
- CA12k End Sequencing (HL152_130524) Analysis
Notebook
2013
<calendar> name=Matt format=%name:LabNotes/%year-%month-%day date=2013/01/01 view=oneyear </calendar>
Protocols
Sequencing Runs
130325_MiSeq: CA12k capture of gDNA, cDNAwRNase, and cDNA-RNase
130524_HL152 (Lane 2, unassigned): CA12k oligos
130628_HL155 (Lane 3, Indx 10 & 12): Agi26k_0gap and Agi26k_20gap oligos
130729_MiSeq: Agi26k_0gap and Agi26k_20gap capture of gDNA and cDNA
Probe Sets
CA12k: 12,355 probes (170nt)
Agi26k_0gap: 12,964 probes (193nt)
Agi26k_20gap: 13,179 probes (193nt)