Matthew Cai: Difference between revisions

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*[[Matt:LabNotes/exonProbeDesign|Padlock Probe Design]]
*[[Matt:LabNotes/exonProbeDesign|Padlock Probe Design]]
*[[Matt:LabNotes/Probe Production and Capture|Probe Production and Capture]]
*[[Matt:LabNotes/Probe Production and Capture|Probe Production and Capture]]
*[[Matt:LabNotes/MiSeq_130325 Analysis|CA12k Capture (MiSeq_130325) Analysis]]
*[[Matt:LabNotes/2013-8-20|CA12k Capture (MiSeq_130325) Analysis]]
*[[Matt:LabNotes/2013-7-26#Analysis_of_HL152:_Representation_Bias_of_CA12k_Oligos_(Corrected)|CA12k End Sequencing (HL152_130524) Analysis]]
*[[Matt:LabNotes/2013-7-26#Analysis_of_HL152:_Representation_Bias_of_CA12k_Oligos_(Corrected)|CA12k End Sequencing (HL152_130524) Analysis]]
*[[Matt:LabNotes/2013-7-26#Analysis_of_HL155:_Representation_Bias_of_Agi26k_Oligos_(Corrected)|Agi26k End Sequencing (HL155_130628) Analysis]]
*[[Matt:LabNotes/2013-7-26#Analysis_of_HL155:_Representation_Bias_of_Agi26k_Oligos_(Corrected)|Agi26k End Sequencing (HL155_130628) Analysis]]

Revision as of 18:59, 21 August 2013

Projects

in Situ Sequencing

Notebook

2013

<calendar> name=Matt format=%name:LabNotes/%year-%month-%day date=2013/01/01 view=oneyear </calendar>

Protocols

Sequencing Runs

130325_MiSeq: CA12k capture of gDNA, cDNAwRNase, and cDNA-RNase
130524_HL152 (Lane 2, unassigned): CA12k oligos
130628_HL155 (Lane 3, Indx 10 & 12): Agi26k_0gap and Agi26k_20gap oligos
130729_MiSeq: Agi26k_0gap and Agi26k_20gap capture of gDNA and cDNA

Probe Sets

CA12k: 12,355 probes (170nt)
Agi26k_0gap: 12,964 probes (193nt)
Agi26k_20gap: 13,179 probes (193nt)