Blue:RNA-Seq Libraries: Difference between revisions
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| align="center" style="background:#f0f0f0;"|'''Lane''' | | align="center" style="background:#f0f0f0;"|'''Lane''' | ||
| align="center" style="background:#f0f0f0;"|'''Data Storage Location''' | | align="center" style="background:#f0f0f0;"|'''Data Storage Location''' | ||
| align="center" style="background:#f0f0f0;"|'''Analysis''' | |||
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|BL-mCherryNPC-N2id81_92-Apr24||[[Blue:RNA-Seq Libraries:04242013|04242013]]||||hNPC lo/hi Pool||R04||RnaseIII||HL152||Lanes 6-8||/home/kunzhang/seqStore/130521_HL152 | |BL-mCherryNPC-N2id81_92-Apr24||[[Blue:RNA-Seq Libraries:04242013|04242013]]||||hNPC lo/hi Pool||R04||RnaseIII||HL152||Lanes 6-8||/home/kunzhang/seqStore/130521_HL152|| | ||
|- | |- | ||
|BL-UHRR-IVT-May28||[[Blue:RNA-Seq Libraries:05282013|05282013]]||||UHRR||RL.IVT.N6/N9||RNaseIII||HL155||Lanes 1,2 (id1,2,4,5)||/home/kunzhang/seqStore/130627_HiSeq_RapidRun/BL-UHRR-IVT-May28 | |BL-UHRR-IVT-May28||[[Blue:RNA-Seq Libraries:05282013|05282013]]||||UHRR||RL.IVT.N6/N9||RNaseIII||HL155||Lanes 1,2 (id1,2,4,5)||/home/kunzhang/seqStore/130627_HiSeq_RapidRun/BL-UHRR-IVT-May28|| | ||
|- | |- | ||
|BL_mESC_SingleCell_0614||[[Blue:RNA-Seq Libraries:06142013|06142013]]||||Single mESCs (60 cells)||R04 (one and two step)||RNaseIII, 94C 2min||HL155||Lane 8 (id81-84)||/home/kunzhang/seqStore/130628_HL155 | |BL_mESC_SingleCell_0614||[[Blue:RNA-Seq Libraries:06142013|06142013]]||||Single mESCs (60 cells)||R04 (one and two step)||RNaseIII, 94C 2min||HL155||Lane 8 (id81-84)||/home/kunzhang/seqStore/130628_HL155|| | ||
|- | |- | ||
|BL_mCherryNPC_0620||[[Blue:RNA-Seq Libraries:06202013|06202013]]||||human NPC sorts CD184+CD44-||R04||RnaseIII||HL155||Lanes1,2 (id1-5, 11-12)||/home/kunzhang/seqStore/130628_HL155 | |BL_mCherryNPC_0620||[[Blue:RNA-Seq Libraries:06202013|06202013]]||||human NPC sorts CD184+CD44-||R04||RnaseIII||HL155||Lanes1,2 (id1-5, 11-12)||/home/kunzhang/seqStore/130628_HL155|| | ||
|- | |- | ||
|BL_mESC_SingleCell_0621||[[Blue:RNA-Seq Libraries:06212013|06212013]]||||mESCs (34 cells)||R04 (one step)||94C 2min||HL155||Lane 8 (id13-18)||/home/kunzhang/seqStore/130628_HL155 | |BL_mESC_SingleCell_0621||[[Blue:RNA-Seq Libraries:06212013|06212013]]||||mESCs (34 cells)||R04 (one step)||94C 2min||HL155||Lane 8 (id13-18)||/home/kunzhang/seqStore/130628_HL155|| | ||
|- | |- | ||
|BL_mNPC_SingleCell_N2id81_Jul25||[[Blue:RNA-Seq Experiments:07252013|07252013]]||||Single mNPCs (60)||R04||94C 2min||HL157||Lane 3 (id81)||/home/kunzhang/seqStore/130807_HL157 | |BL_mNPC_SingleCell_N2id81_Jul25||[[Blue:RNA-Seq Experiments:07252013|07252013]]||||Single mNPCs (60)||R04||94C 2min||HL157||Lane 3 (id81)||/home/kunzhang/seqStore/130807_HL157|| | ||
|- | |- | ||
|BL_mNPC_SingleCell_N2id82_Jul25||[[Blue:RNA-Seq Experiments:07252013|07252013]]||||Single mNPCs (60)||R04||94C 2min||HL157||Lane 4 (id82)||/home/kunzhang/seqStore/130807_HL157 | |BL_mNPC_SingleCell_N2id82_Jul25||[[Blue:RNA-Seq Experiments:07252013|07252013]]||||Single mNPCs (60)||R04||94C 2min||HL157||Lane 4 (id82)||/home/kunzhang/seqStore/130807_HL157|| | ||
|- | |- | ||
|BL_huES8_SingleCell_N2id85_0820||[[Blue:RNA-Seq Experiments:08202013|08202013]]||||Single huESCs (30)||R04||RNaseIII||HL161||Lane (id85)||/home/kunzhang/seqStore/131009_HL161 | |BL_huES8_SingleCell_N2id85_0820||[[Blue:RNA-Seq Experiments:08202013|08202013]]||||Single huESCs (30)||R04||RNaseIII||HL161||Lane (id85)||/home/kunzhang/seqStore/131009_HL161|| | ||
|- | |- | ||
|BL_huES8_SingleCell_N2id86_0820||[[Blue:RNA-Seq Experiments:08202013|08202013]]||||Single huESCs (30)||R04||RNaseIII||HL161||Lane (id86)||/home/kunzhang/seqStore/131009_HL161 | |BL_huES8_SingleCell_N2id86_0820||[[Blue:RNA-Seq Experiments:08202013|08202013]]||||Single huESCs (30)||R04||RNaseIII||HL161||Lane (id86)||/home/kunzhang/seqStore/131009_HL161|| | ||
|- | |- | ||
|BL_huES8_SingleCell_N2id87-88_0820||[[Blue:RNA-Seq Experiments:08202013|08202013]]||||250pg UHRR||R04||RNaseIII||HL161||Lane (id87,88)||/home/kunzhang/seqStore/131009_HL161 | |BL_huES8_SingleCell_N2id87-88_0820||[[Blue:RNA-Seq Experiments:08202013|08202013]]||||250pg UHRR||R04||RNaseIII||HL161||Lane (id87,88)||/home/kunzhang/seqStore/131009_HL161|| | ||
|- | |- | ||
|BL_UHRR_N2id9-12_0910||[[Blue:RNA-Seq Experiments:09102013|09102013]]||||500pg UHRR||R04-R05||RNaseIII, 94C 2min||HL160||Lane 3 - 20% (id9-12)||/home/kunzhang/seqStore/130925_HL160 | |BL_UHRR_N2id9-12_0910||[[Blue:RNA-Seq Experiments:09102013|09102013]]||||500pg UHRR||R04-R05||RNaseIII, 94C 2min||HL160||Lane 3 - 20% (id9-12)||/home/kunzhang/seqStore/130925_HL160|| | ||
|- | |- | ||
|BL_UHRR_N2id13-14_0910||[[Blue:RNA-Seq Experiments:09102013|09102013]]||||500pg UHRR||Smarter||RNaseIII, 94C 2min||HL161||Lane (id13, 14)||/home/kunzhang/seqStore/131009_HL161 | |BL_UHRR_N2id13-14_0910||[[Blue:RNA-Seq Experiments:09102013|09102013]]||||500pg UHRR||Smarter||RNaseIII, 94C 2min||HL161||Lane (id13, 14)||/home/kunzhang/seqStore/131009_HL161|| | ||
|- | |- | ||
|BL_UHRR_N2id9,12_Sept18||[[Blue:RNA-Seq Experiments:09182013|09182013]]||||1ng UHRR||STRT_V2_3,R03||RNaseIII||HL161||Lane (id9, 12)||/home/kunzhang/seqStore/131009_HL161 | |BL_UHRR_N2id9,12_Sept18||[[Blue:RNA-Seq Experiments:09182013|09182013]]||||1ng UHRR||STRT_V2_3,R03||RNaseIII||HL161||Lane (id9, 12)||/home/kunzhang/seqStore/131009_HL161|| | ||
|- | |- | ||
|BL_UHRR/HuNu_N2id15-20_Sept27||[[Blue:RNA-Seq Experiments:09272013|09272013]]||||1ng UHRR, HuNu, msLCM||R06||RNAseIII (5-10min)||HL161||Lane (id15-20)||/home/kunzhang/seqStore/131009_HL161 | |BL_UHRR/HuNu_N2id15-20_Sept27||[[Blue:RNA-Seq Experiments:09272013|09272013]]||||1ng UHRR, HuNu, msLCM||R06||RNAseIII (5-10min)||HL161||Lane 5(id15-20)||/home/kunzhang/seqStore/131009_HL161|| | ||
|- | |- | ||
|BL_UHRR/HuNu_N2id21-28_Sept27||[[Blue:RNA-Seq Experiments:09272013|09272013]]||||10pg-100pg UHRR||R06||RNaseIII (5-10min)||||Lane|| | |BL_UHRR/HuNu_N2id21-28_Sept27||[[Blue:RNA-Seq Experiments:09272013|09272013]]||||10pg-100pg UHRR||R06||RNaseIII (5-10min)||||Lane|||| | ||
|- | |- | ||
|BL_huES8_SingleCell_N2id-90_Oct01||[[Blue:RNA-Seq Experiments:10012013|10012013]]||||250pg UHRR||R06||RNaseIII||HL161||Lane (id90)||/home/kunzhang/seqStore/131009_HL161 | |BL_huES8_SingleCell_N2id-90_Oct01||[[Blue:RNA-Seq Experiments:10012013|10012013]]||||250pg UHRR||R06||RNaseIII||HL161||Lane (id90)||/home/kunzhang/seqStore/131009_HL161|| | ||
|- | |- | ||
|BL_huES8_SingleCell_N2id-89_Oct01||[[Blue:RNA-Seq Experiments:10012013|10012013]]||||Single huESCs (30)||R06||RNaseIII||HL161||Lane (id89)||/home/kunzhang/seqStore/131009_HL161 | |BL_huES8_SingleCell_N2id-89_Oct01||[[Blue:RNA-Seq Experiments:10012013|10012013]]||||Single huESCs (30)||R06||RNaseIII||HL161||Lane (id89)||/home/kunzhang/seqStore/131009_HL161|| | ||
|- | |- | ||
|BL-LCM-10Cell_N2id1_4,7,8-Oct3||[[Blue:RNA-Seq Experiments:10032013|10032013]]||id1||msLCM 10 cell (C1)||R06||RNaseIII||HL161||Lane (id1-4, 7, 8)||/home/kunzhang/seqStore/131009_HL161 | |BL-LCM-10Cell_N2id1_4,7,8-Oct3||[[Blue:RNA-Seq Experiments:10032013|10032013]]||id1||msLCM 10 cell (C1)||R06||RNaseIII||HL161||Lane (id1-4, 7, 8)||/home/kunzhang/seqStore/131009_HL161|| | ||
|- | |- | ||
|||||id2||msLCM 10 cell (C3)||R06||RNaseIII||HL161||Lane (id1-4, 7, 8)||/home/kunzhang/seqStore/131009_HL161 | |||||id2||msLCM 10 cell (C3)||R06||RNaseIII||HL161||Lane (id1-4, 7, 8)||/home/kunzhang/seqStore/131009_HL161|| | ||
|- | |- | ||
|||||id3||msLCM 10 cell(T1)||R06||RNaseIII||HL161||Lane (id1-4, 7, 8)||/home/kunzhang/seqStore/131009_HL161 | |||||id3||msLCM 10 cell(T1)||R06||RNaseIII||HL161||Lane (id1-4, 7, 8)||/home/kunzhang/seqStore/131009_HL161|| | ||
|- | |- | ||
|||||id4||msLCM 10 cell (T4)||R06||RNaseIII||HL161||Lane (id1-4, 7, 8)||/home/kunzhang/seqStore/131009_HL161 | |||||id4||msLCM 10 cell (T4)||R06||RNaseIII||HL161||Lane (id1-4, 7, 8)||/home/kunzhang/seqStore/131009_HL161|| | ||
|- | |- | ||
|||||id7||msLCM 100pg||R06||RNaseIII||HL161||Lane (id1-4, 7, 8)||/home/kunzhang/seqStore/131009_HL161 | |||||id7||msLCM 100pg||R06||RNaseIII||HL161||Lane (id1-4, 7, 8)||/home/kunzhang/seqStore/131009_HL161|| | ||
|- | |- | ||
|||||id8||msLCM 100pg||R06||RNaseIII||HL161||Lane (id1-4, 7, 8)||/home/kunzhang/seqStore/131009_HL161 | |||||id8||msLCM 100pg||R06||RNaseIII||HL161||Lane (id1-4, 7, 8)||/home/kunzhang/seqStore/131009_HL161|| | ||
|- | |- | ||
|BL_totoRNAseq_10ngUHRR_Nov13||[[Blue:RNA-Seq Experiments:11132013|11132013]]||id1||UHRR(10ng)/ERCC RNaseIII buffer/Ambion PAP(ATP)||R06||RNaseIII||HL162||Lane || | |BL_totoRNAseq_10ngUHRR_Nov13||[[Blue:RNA-Seq Experiments:11132013|11132013]]||id1||UHRR(10ng)/ERCC RNaseIII buffer/Ambion PAP(ATP)||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:11132013|11132013]]||id2||UHRR(10ng)/ERCC RNaseIII buffer/Ambion PAP(ATP/3'dATP)||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:11132013|11132013]]||id2||UHRR(10ng)/ERCC RNaseIII buffer/Ambion PAP(ATP/3'dATP)||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:11132013|11132013]]||id3||UHRR(10ng)/ERCC RNaseIII buffer/Ambion PAP(ATP/dATP)||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:11132013|11132013]]||id3||UHRR(10ng)/ERCC RNaseIII buffer/Ambion PAP(ATP/dATP)||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:11132013|11132013]]||id4||UHRR(10ng)/ERCC RNaseIII buffer/Affymetrix PAP(ATP)||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:11132013|11132013]]||id4||UHRR(10ng)/ERCC RNaseIII buffer/Affymetrix PAP(ATP)||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:11132013|11132013]]||id5||UHRR(10ng)/ERCC RNaseIII buffer/Affymetrix PAP(ATP/3'dATP)||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:11132013|11132013]]||id5||UHRR(10ng)/ERCC RNaseIII buffer/Affymetrix PAP(ATP/3'dATP)||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:11132013|11132013]]||id6||UHRR(10ng)/ERCC RNaseIII buffer/Affymetrix PAP(ATP/dATP)||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:11132013|11132013]]||id6||UHRR(10ng)/ERCC RNaseIII buffer/Affymetrix PAP(ATP/dATP)||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:11132013|11132013]]||id7||UHRR(10ng)/ERCC RNaseIII buffer/Affymetrix PAP(ATP) then added 3'dATP||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:11132013|11132013]]||id7||UHRR(10ng)/ERCC RNaseIII buffer/Affymetrix PAP(ATP) then added 3'dATP||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
|BL_totoRNAseq_1ngUHRR_Dec03||[[Blue:RNA-Seq Experiments:12032013|12032013]]||id81||UHRR(1ng)/ERCC RNaseIII 5min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane || | |BL_totoRNAseq_1ngUHRR_Dec03||[[Blue:RNA-Seq Experiments:12032013|12032013]]||id81||UHRR(1ng)/ERCC RNaseIII 5min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:12032013|12032013]]||id82||UHRR(1ng)/ERCC RNaseIII 5min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:12032013|12032013]]||id82||UHRR(1ng)/ERCC RNaseIII 5min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
|BL_totoRNAseq_1ng_100pgUHRR_Dec06||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id9||UHRR(1ng)/ERCC RNaseIII 1min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane || | |BL_totoRNAseq_1ng_100pgUHRR_Dec06||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id9||UHRR(1ng)/ERCC RNaseIII 1min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id10||UHRR(1ng)/ERCC RNaseIII 1min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id10||UHRR(1ng)/ERCC RNaseIII 1min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id17||UHRR(1ng)/ERCC RNaseIII 1min/Affymetrix PAP 30min||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id17||UHRR(1ng)/ERCC RNaseIII 1min/Affymetrix PAP 30min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id18||UHRR(1ng)/ERCC RNaseIII 1min/Affymetrix PAP 30min||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id18||UHRR(1ng)/ERCC RNaseIII 1min/Affymetrix PAP 30min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id11||UHRR(100pg)/ERCC RNaseIII 1min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id11||UHRR(100pg)/ERCC RNaseIII 1min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id12||UHRR(100pg)/ERCC RNaseIII 1min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id12||UHRR(100pg)/ERCC RNaseIII 1min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id19||UHRR(100pg)/ERCC RNaseIII 1min/Affymetrix PAP 30min||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id19||UHRR(100pg)/ERCC RNaseIII 1min/Affymetrix PAP 30min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id20||UHRR(100pg)/ERCC RNaseIII 1min/Affymetrix PAP 30min||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:12062013|12062013]]||id20||UHRR(100pg)/ERCC RNaseIII 1min/Affymetrix PAP 30min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
|BL_totoRNAseq_10pgUHRR_Dec10||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id89||UHRR(10pg)/ERCC RNaseIII 15sec/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane || | |BL_totoRNAseq_10pgUHRR_Dec10||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id89||UHRR(10pg)/ERCC RNaseIII 15sec/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id90||UHRR(10pg)/ERCC RNaseIII 15sec/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id90||UHRR(10pg)/ERCC RNaseIII 15sec/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id91||UHRR(10pg)/ERCC RNaseIII 30sec/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id91||UHRR(10pg)/ERCC RNaseIII 30sec/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id92||UHRR(10pg)/ERCC RNaseIII 30sec/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id92||UHRR(10pg)/ERCC RNaseIII 30sec/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id93||UHRR(10pg)/ERCC RNaseIII 1min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id93||UHRR(10pg)/ERCC RNaseIII 1min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id94||UHRR(10pg)/ERCC RNaseIII 1min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id94||UHRR(10pg)/ERCC RNaseIII 1min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id95||UHRR(10pg)/ERCC RNaseIII 5min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id95||UHRR(10pg)/ERCC RNaseIII 5min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
| ||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id96||UHRR(10pg)/ERCC RNaseIII 5min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane || | | ||[[Blue:RNA-Seq Experiments:12102013|12102013]]||id96||UHRR(10pg)/ERCC RNaseIII 5min/Affymetrix PAP 10min||R06||RNaseIII||HL162||Lane |||| | ||
|- | |- | ||
|} | |} |
Revision as of 00:28, 18 December 2013
Sequencing Summary Table
Library | Experiment | ID | Sample | TSO | Condition | Seq Run | Lane | Data Storage Location | Analysis |
BL-mCherryNPC-N2id81_92-Apr24 | 04242013 | hNPC lo/hi Pool | R04 | RnaseIII | HL152 | Lanes 6-8 | /home/kunzhang/seqStore/130521_HL152 | ||
BL-UHRR-IVT-May28 | 05282013 | UHRR | RL.IVT.N6/N9 | RNaseIII | HL155 | Lanes 1,2 (id1,2,4,5) | /home/kunzhang/seqStore/130627_HiSeq_RapidRun/BL-UHRR-IVT-May28 | ||
BL_mESC_SingleCell_0614 | 06142013 | Single mESCs (60 cells) | R04 (one and two step) | RNaseIII, 94C 2min | HL155 | Lane 8 (id81-84) | /home/kunzhang/seqStore/130628_HL155 | ||
BL_mCherryNPC_0620 | 06202013 | human NPC sorts CD184+CD44- | R04 | RnaseIII | HL155 | Lanes1,2 (id1-5, 11-12) | /home/kunzhang/seqStore/130628_HL155 | ||
BL_mESC_SingleCell_0621 | 06212013 | mESCs (34 cells) | R04 (one step) | 94C 2min | HL155 | Lane 8 (id13-18) | /home/kunzhang/seqStore/130628_HL155 | ||
BL_mNPC_SingleCell_N2id81_Jul25 | 07252013 | Single mNPCs (60) | R04 | 94C 2min | HL157 | Lane 3 (id81) | /home/kunzhang/seqStore/130807_HL157 | ||
BL_mNPC_SingleCell_N2id82_Jul25 | 07252013 | Single mNPCs (60) | R04 | 94C 2min | HL157 | Lane 4 (id82) | /home/kunzhang/seqStore/130807_HL157 | ||
BL_huES8_SingleCell_N2id85_0820 | 08202013 | Single huESCs (30) | R04 | RNaseIII | HL161 | Lane (id85) | /home/kunzhang/seqStore/131009_HL161 | ||
BL_huES8_SingleCell_N2id86_0820 | 08202013 | Single huESCs (30) | R04 | RNaseIII | HL161 | Lane (id86) | /home/kunzhang/seqStore/131009_HL161 | ||
BL_huES8_SingleCell_N2id87-88_0820 | 08202013 | 250pg UHRR | R04 | RNaseIII | HL161 | Lane (id87,88) | /home/kunzhang/seqStore/131009_HL161 | ||
BL_UHRR_N2id9-12_0910 | 09102013 | 500pg UHRR | R04-R05 | RNaseIII, 94C 2min | HL160 | Lane 3 - 20% (id9-12) | /home/kunzhang/seqStore/130925_HL160 | ||
BL_UHRR_N2id13-14_0910 | 09102013 | 500pg UHRR | Smarter | RNaseIII, 94C 2min | HL161 | Lane (id13, 14) | /home/kunzhang/seqStore/131009_HL161 | ||
BL_UHRR_N2id9,12_Sept18 | 09182013 | 1ng UHRR | STRT_V2_3,R03 | RNaseIII | HL161 | Lane (id9, 12) | /home/kunzhang/seqStore/131009_HL161 | ||
BL_UHRR/HuNu_N2id15-20_Sept27 | 09272013 | 1ng UHRR, HuNu, msLCM | R06 | RNAseIII (5-10min) | HL161 | Lane 5(id15-20) | /home/kunzhang/seqStore/131009_HL161 | ||
BL_UHRR/HuNu_N2id21-28_Sept27 | 09272013 | 10pg-100pg UHRR | R06 | RNaseIII (5-10min) | Lane | ||||
BL_huES8_SingleCell_N2id-90_Oct01 | 10012013 | 250pg UHRR | R06 | RNaseIII | HL161 | Lane (id90) | /home/kunzhang/seqStore/131009_HL161 | ||
BL_huES8_SingleCell_N2id-89_Oct01 | 10012013 | Single huESCs (30) | R06 | RNaseIII | HL161 | Lane (id89) | /home/kunzhang/seqStore/131009_HL161 | ||
BL-LCM-10Cell_N2id1_4,7,8-Oct3 | 10032013 | id1 | msLCM 10 cell (C1) | R06 | RNaseIII | HL161 | Lane (id1-4, 7, 8) | /home/kunzhang/seqStore/131009_HL161 | |
id2 | msLCM 10 cell (C3) | R06 | RNaseIII | HL161 | Lane (id1-4, 7, 8) | /home/kunzhang/seqStore/131009_HL161 | |||
id3 | msLCM 10 cell(T1) | R06 | RNaseIII | HL161 | Lane (id1-4, 7, 8) | /home/kunzhang/seqStore/131009_HL161 | |||
id4 | msLCM 10 cell (T4) | R06 | RNaseIII | HL161 | Lane (id1-4, 7, 8) | /home/kunzhang/seqStore/131009_HL161 | |||
id7 | msLCM 100pg | R06 | RNaseIII | HL161 | Lane (id1-4, 7, 8) | /home/kunzhang/seqStore/131009_HL161 | |||
id8 | msLCM 100pg | R06 | RNaseIII | HL161 | Lane (id1-4, 7, 8) | /home/kunzhang/seqStore/131009_HL161 | |||
BL_totoRNAseq_10ngUHRR_Nov13 | 11132013 | id1 | UHRR(10ng)/ERCC RNaseIII buffer/Ambion PAP(ATP) | R06 | RNaseIII | HL162 | Lane | ||
11132013 | id2 | UHRR(10ng)/ERCC RNaseIII buffer/Ambion PAP(ATP/3'dATP) | R06 | RNaseIII | HL162 | Lane | |||
11132013 | id3 | UHRR(10ng)/ERCC RNaseIII buffer/Ambion PAP(ATP/dATP) | R06 | RNaseIII | HL162 | Lane | |||
11132013 | id4 | UHRR(10ng)/ERCC RNaseIII buffer/Affymetrix PAP(ATP) | R06 | RNaseIII | HL162 | Lane | |||
11132013 | id5 | UHRR(10ng)/ERCC RNaseIII buffer/Affymetrix PAP(ATP/3'dATP) | R06 | RNaseIII | HL162 | Lane | |||
11132013 | id6 | UHRR(10ng)/ERCC RNaseIII buffer/Affymetrix PAP(ATP/dATP) | R06 | RNaseIII | HL162 | Lane | |||
11132013 | id7 | UHRR(10ng)/ERCC RNaseIII buffer/Affymetrix PAP(ATP) then added 3'dATP | R06 | RNaseIII | HL162 | Lane | |||
BL_totoRNAseq_1ngUHRR_Dec03 | 12032013 | id81 | UHRR(1ng)/ERCC RNaseIII 5min/Affymetrix PAP 10min | R06 | RNaseIII | HL162 | Lane | ||
12032013 | id82 | UHRR(1ng)/ERCC RNaseIII 5min/Affymetrix PAP 10min | R06 | RNaseIII | HL162 | Lane | |||
BL_totoRNAseq_1ng_100pgUHRR_Dec06 | 12062013 | id9 | UHRR(1ng)/ERCC RNaseIII 1min/Affymetrix PAP 10min | R06 | RNaseIII | HL162 | Lane | ||
12062013 | id10 | UHRR(1ng)/ERCC RNaseIII 1min/Affymetrix PAP 10min | R06 | RNaseIII | HL162 | Lane | |||
12062013 | id17 | UHRR(1ng)/ERCC RNaseIII 1min/Affymetrix PAP 30min | R06 | RNaseIII | HL162 | Lane | |||
12062013 | id18 | UHRR(1ng)/ERCC RNaseIII 1min/Affymetrix PAP 30min | R06 | RNaseIII | HL162 | Lane | |||
12062013 | id11 | UHRR(100pg)/ERCC RNaseIII 1min/Affymetrix PAP 10min | R06 | RNaseIII | HL162 | Lane | |||
12062013 | id12 | UHRR(100pg)/ERCC RNaseIII 1min/Affymetrix PAP 10min | R06 | RNaseIII | HL162 | Lane | |||
12062013 | id19 | UHRR(100pg)/ERCC RNaseIII 1min/Affymetrix PAP 30min | R06 | RNaseIII | HL162 | Lane | |||
12062013 | id20 | UHRR(100pg)/ERCC RNaseIII 1min/Affymetrix PAP 30min | R06 | RNaseIII | HL162 | Lane | |||
BL_totoRNAseq_10pgUHRR_Dec10 | 12102013 | id89 | UHRR(10pg)/ERCC RNaseIII 15sec/Affymetrix PAP 10min | R06 | RNaseIII | HL162 | Lane | ||
12102013 | id90 | UHRR(10pg)/ERCC RNaseIII 15sec/Affymetrix PAP 10min | R06 | RNaseIII | HL162 | Lane | |||
12102013 | id91 | UHRR(10pg)/ERCC RNaseIII 30sec/Affymetrix PAP 10min | R06 | RNaseIII | HL162 | Lane | |||
12102013 | id92 | UHRR(10pg)/ERCC RNaseIII 30sec/Affymetrix PAP 10min | R06 | RNaseIII | HL162 | Lane | |||
12102013 | id93 | UHRR(10pg)/ERCC RNaseIII 1min/Affymetrix PAP 10min | R06 | RNaseIII | HL162 | Lane | |||
12102013 | id94 | UHRR(10pg)/ERCC RNaseIII 1min/Affymetrix PAP 10min | R06 | RNaseIII | HL162 | Lane | |||
12102013 | id95 | UHRR(10pg)/ERCC RNaseIII 5min/Affymetrix PAP 10min | R06 | RNaseIII | HL162 | Lane | |||
12102013 | id96 | UHRR(10pg)/ERCC RNaseIII 5min/Affymetrix PAP 10min | R06 | RNaseIII | HL162 | Lane |
Additional Libraries Sequenced