Noi/NOTES/2014-7-7: Difference between revisions

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>Noi
(Created page with "= Summary of RRBS sequencing libraries and their corresponding index = '''Calendar''' == HiSeq Rapid run at IGM ( XXXXXX) == {| {{table}} class...")
 
>Noi
mNo edit summary
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[[noi:DMR220k_LabNotes#2014| '''Calendar''']]
[[noi:DMR220k_LabNotes#2014| '''Calendar''']]
== HiSeq Rapid run at IGM ( XXXXXX) ==
== HiSeq Rapid run at IGM ( XXXXXX) ==
* PE 100+7
* [[Noi/NOTES/2014-6-28| NP-RRBS-6T_set1_100ng-Jun28, NP-RRBS-6T-set2_100ng-Jun28, NP-RRBS-6T-4_2-set2_100ng-Jun28, NP-RRBS-7T_set1_100ng-Jun28, NP-RRBS-7T_set2_100ng-Jun28]]
{| {{table}} class = wikitable
{| {{table}} class = wikitable
| align="center" style="width:200px;background:#f0f0f0;"|'''Original Library ID'''
| align="center" style="width:200px;background:#f0f0f0;"|'''Original Library ID'''
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| align="center" style="width:60px;background:#f0f0f0;"|'''TruSeq Index'''
| align="center" style="width:60px;background:#f0f0f0;"|'''TruSeq Index'''
| align="center" style="width:100px;background:#f0f0f0;"|'''Sequencing platform/at'''
| align="center" style="width:100px;background:#f0f0f0;"|'''Sequencing platform/at'''
| align="center" style="width:50px;background:#f0f0f0;"|'''Lane'''
| align="center" style="width:50px;background:#f0f0f0;"|'''Lane #'''
| align="center" style="width:60px;background:#f0f0f0;"|'''Inout DNA amount (ng)'''
| align="center" style="width:60px;background:#f0f0f0;"|'''Inout DNA amount (ng)'''
| align="center" style="width:220px;background:#f0f0f0;"|'''Note'''
| align="center" style="width:220px;background:#f0f0f0;"|'''Note'''
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== HiSeq Rapid run at Illumina ( XXXXXX) ==
== HiSeq Rapid run at Illumina ( XXXXXX) ==
* PE 100+7
* [[Noi/NOTES/2014-6-29| NP-RRBS-6P_1ng-Jun29, NP-RRBS-7P_1ng-Jun29]]
{| {{table}} class = wikitable
{| {{table}} class = wikitable
| align="center" style="width:200px;background:#f0f0f0;"|'''Original Library ID'''
| align="center" style="width:200px;background:#f0f0f0;"|'''Original Library ID'''
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| align="center" style="width:60px;background:#f0f0f0;"|'''TruSeq Index'''
| align="center" style="width:60px;background:#f0f0f0;"|'''TruSeq Index'''
| align="center" style="width:100px;background:#f0f0f0;"|'''Sequencing platform/at'''
| align="center" style="width:100px;background:#f0f0f0;"|'''Sequencing platform/at'''
| align="center" style="width:50px;background:#f0f0f0;"|'''Lane'''
| align="center" style="width:50px;background:#f0f0f0;"|'''Lane #'''
| align="center" style="width:60px;background:#f0f0f0;"|'''Inout DNA amount (ng)'''
| align="center" style="width:60px;background:#f0f0f0;"|'''Inout DNA amount (ng)'''
| align="center" style="width:220px;background:#f0f0f0;"|'''Note'''
| align="center" style="width:220px;background:#f0f0f0;"|'''Note'''

Revision as of 22:55, 7 July 2014

Summary of RRBS sequencing libraries and their corresponding index

Calendar

HiSeq Rapid run at IGM ( XXXXXX)

Original Library ID Library ID (for sequencing) Sample ID TruSeq Index Sequencing platform/at Lane # Inout DNA amount (ng) Note
NP-RRBS-6T_set1_100ng-Jun28 NP_RRBS_006T_100ng_20140628 6-T-1_1 1 Rapid run/IGM 1 100 Solid tumor tissue from UCSD-006 project
NP-RRBS-6T_set1_100ng-Jun28 NP_RRBS_006T_100ng_20140628 6-T-2_2 4 Rapid run/IGM 1 100 Solid tumor tissue from UCSD-006 project
NP-RRBS-6T_set1_100ng-Jun28 NP_RRBS_006T_100ng_20140628 6-T-3_1 5 Rapid run/IGM 1 100 Solid tumor tissue from UCSD-006 project
NP-RRBS-6T_set1_100ng-Jun28 NP_RRBS_006T_100ng_20140628 6-T-4_1 7 Rapid run/IGM 1 100 Solid tumor tissue from UCSD-006 project
NP-RRBS-6T_set1_100ng-Jun28 NP_RRBS_006T_100ng_20140628 6-T-5_1 25 Rapid run/IGM 1 100 Solid tumor tissue from UCSD-006 project
NP-RRBS-6T-set2_100ng-Jun28 NP_RRBS_006T_100ng_20140628 6-T-1_2 2 Rapid run/IGM 1 100 Solid tumor tissue from UCSD-006 project
NP-RRBS-6T-set2_100ng-Jun28 NP_RRBS_006T_100ng_20140628 6-T-2_1 23 Rapid run/IGM 1 100 Solid tumor tissue from UCSD-006 project
NP-RRBS-6T-set2_100ng-Jun28 NP_RRBS_006T_100ng_20140628 6-T-3_2 6 Rapid run/IGM 1 100 Solid tumor tissue from UCSD-006 project
NP-RRBS-6T-set2_100ng-Jun28 NP_RRBS_006T_100ng_20140628 6-T-5_2 10 Rapid run/IGM 1 100 Solid tumor tissue from UCSD-006 project
NP-RRBS-6T-4_2-set2_100ng-Jun28 NP_RRBS_006T_100ng_20140628 6-T-4_2 8 Rapid run/IGM 1 100 Solid tumor tissue from UCSD-006 project
NP-RRBS-7T_set1_100ng-Jun28 NP_RRBS_007T_100ng_20140628 7-T-1_1 13 Rapid run/IGM 2 100 Solid tumor tissue from UCSD-007 project
NP-RRBS-7T_set1_100ng-Jun28 NP_RRBS_007T_100ng_20140628 7-T-2_1 15 Rapid run/IGM 2 100 Solid tumor tissue from UCSD-007 project
NP-RRBS-7T_set1_100ng-Jun28 NP_RRBS_007T_100ng_20140628 7-T-3_1 27 Rapid run/IGM 2 100 Solid tumor tissue from UCSD-007 project
NP-RRBS-7T_set1_100ng-Jun28 NP_RRBS_007T_100ng_20140628 7-T-4_1 19 Rapid run/IGM 2 100 Solid tumor tissue from UCSD-007 project
NP-RRBS-7T_set1_100ng-Jun28 NP_RRBS_007T_100ng_20140628 7-T-5_1 21 Rapid run/IGM 2 100 Solid tumor tissue from UCSD-007 project
NP-RRBS-7T_set2_100ng-Jun28 NP_RRBS_007T_100ng_20140628 7-T-1_2 14 Rapid run/IGM 2 100 Solid tumor tissue from UCSD-007 project
NP-RRBS-7T_set2_100ng-Jun28 NP_RRBS_007T_100ng_20140628 7-T-2_2 16 Rapid run/IGM 2 100 Solid tumor tissue from UCSD-007 project
NP-RRBS-7T_set2_100ng-Jun28 NP_RRBS_007T_100ng_20140628 7-T-3_2 18 Rapid run/IGM 2 100 Solid tumor tissue from UCSD-007 project
NP-RRBS-7T_set2_100ng-Jun28 NP_RRBS_007T_100ng_20140628 7-T-4_2 20 Rapid run/IGM 2 100 Solid tumor tissue from UCSD-007 project
NP-RRBS-7T_set2_100ng-Jun28 NP_RRBS_007T_100ng_20140628 7-T-5_2 22 Rapid run/IGM 2 100 Solid tumor tissue from UCSD-007 project

HiSeq Rapid run at Illumina ( XXXXXX)

Original Library ID Sample ID TruSeq Index Sequencing platform/at Lane # Inout DNA amount (ng) Note
NP-RRBS-6P_1ng-Jun29 6-P-1 13 Rapid run/ILMN 1 1 Plasma from UCSD-006 project
NP-RRBS-6P_1ng-Jun29 6-P-2 14 Rapid run/ILMN 1 1 Plasma from UCSD-006 project
NP-RRBS-6P_1ng-Jun29 6-P-3 15 Rapid run/ILMN 1 1 Plasma from UCSD-006 project
NP-RRBS-6P_1ng-Jun29 6-P-4 16 Rapid run/ILMN 1 1 Plasma from UCSD-006 project
NP-RRBS-6P_1ng-Jun29 6-P-5 27 Rapid run/ILMN 1 1 Plasma from UCSD-006 project
NP-RRBS-6P_1ng-Jun29 6-P-6 18 Rapid run/ILMN 1 1 Plasma from UCSD-006 project
NP-RRBS-6P_1ng-Jun29 6-P-7 19 Rapid run/ILMN 1 1 Plasma from UCSD-006 project
NP-RRBS-6P_1ng-Jun29 6-P-8 20 Rapid run/ILMN 1 1 Plasma from UCSD-006 project
NP-RRBS-6P_1ng-Jun29 6-P-9 21 Rapid run/ILMN 1 1 Plasma from UCSD-006 project
NP-RRBS-6P_1ng-Jun29 6-P-10 22 Rapid run/ILMN 1 1 Plasma from UCSD-006 project
NP-RRBS-7P_1ng-Jun29 7-P-1 1 Rapid run/ILMN 2 1 Plasma from UCSD-007 project
NP-RRBS-7P_1ng-Jun29 7-P-2 2 Rapid run/ILMN 2 1 Plasma from UCSD-007 project
NP-RRBS-7P_1ng-Jun29 7-P-3 4 Rapid run/ILMN 2 1 Plasma from UCSD-007 project
NP-RRBS-7P_1ng-Jun29 7-P-4 5 Rapid run/ILMN 2 1 Plasma from UCSD-007 project
NP-RRBS-7P_1ng-Jun29 7-P-5 6 Rapid run/ILMN 2 1 Plasma from UCSD-007 project
NP-RRBS-7P_1ng-Jun29 7-P-6 7 Rapid run/ILMN 2 1 Plasma from UCSD-007 project
NP-RRBS-7P_1ng-Jun29 7-P-7 8 Rapid run/ILMN 2 1 Plasma from UCSD-007 project
NP-RRBS-7P_1ng-Jun29 7-P-8 10 Rapid run/ILMN 2 1 Plasma from UCSD-007 project
NP-RRBS-7P_1ng-Jun29 7-P-9 11 Rapid run/ILMN 2 1 Plasma from UCSD-007 project
NP-RRBS-7P_1ng-Jun29 7-P-10 12 Rapid run/ILMN 2 1 Plasma from UCSD-007 project