Noi/NOTES/2014-7-7: Difference between revisions
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* PE 100+7 | * PE 100+7 | ||
* [[Noi/NOTES/2014-6-29| Library prep]] | * [[Noi/NOTES/2014-6-29| Library prep]] | ||
* Need to double check with Dr. Zhang if he wants to sequence more plasma sequencing library from project UCSD-004-P (PC-P) and normal control (NC-P). | |||
{| {{table}} class = wikitable | {| {{table}} class = wikitable | ||
| align="center" style="width:200px;background:#f0f0f0;"|'''Original Library ID''' | | align="center" style="width:200px;background:#f0f0f0;"|'''Original Library ID''' |
Revision as of 05:21, 8 July 2014
Summary of RRBS sequencing libraries and their corresponding index
HiSeq Rapid run at IGM ( XXXXXX)
- PE 100+7
- Library prep
Original Library ID | Library ID (for sequencing) | Sample ID | TruSeq Index | Sequencing platform/at | Lane # | Inout DNA amount (ng) | Note |
NP-RRBS-6T_set1_100ng-Jun28 | NP_RRBS_006T_100ng_20140628 | 6-T-1_1 | 1 | Rapid run/IGM | 1 | 100 | Solid tumor tissue from UCSD-006 project |
NP-RRBS-6T_set1_100ng-Jun28 | NP_RRBS_006T_100ng_20140628 | 6-T-2_2 | 4 | Rapid run/IGM | 1 | 100 | Solid tumor tissue from UCSD-006 project |
NP-RRBS-6T_set1_100ng-Jun28 | NP_RRBS_006T_100ng_20140628 | 6-T-3_1 | 5 | Rapid run/IGM | 1 | 100 | Solid tumor tissue from UCSD-006 project |
NP-RRBS-6T_set1_100ng-Jun28 | NP_RRBS_006T_100ng_20140628 | 6-T-4_1 | 7 | Rapid run/IGM | 1 | 100 | Solid tumor tissue from UCSD-006 project |
NP-RRBS-6T_set1_100ng-Jun28 | NP_RRBS_006T_100ng_20140628 | 6-T-5_1 | 25 | Rapid run/IGM | 1 | 100 | Solid tumor tissue from UCSD-006 project |
NP-RRBS-6T-set2_100ng-Jun28 | NP_RRBS_006T_100ng_20140628 | 6-T-1_2 | 2 | Rapid run/IGM | 1 | 100 | Solid tumor tissue from UCSD-006 project |
NP-RRBS-6T-set2_100ng-Jun28 | NP_RRBS_006T_100ng_20140628 | 6-T-2_1 | 23 | Rapid run/IGM | 1 | 100 | Solid tumor tissue from UCSD-006 project |
NP-RRBS-6T-set2_100ng-Jun28 | NP_RRBS_006T_100ng_20140628 | 6-T-3_2 | 6 | Rapid run/IGM | 1 | 100 | Solid tumor tissue from UCSD-006 project |
NP-RRBS-6T-set2_100ng-Jun28 | NP_RRBS_006T_100ng_20140628 | 6-T-5_2 | 10 | Rapid run/IGM | 1 | 100 | Solid tumor tissue from UCSD-006 project |
NP-RRBS-6T-4_2-set2_100ng-Jun28 | NP_RRBS_006T_100ng_20140628 | 6-T-4_2 | 8 | Rapid run/IGM | 1 | 100 | Solid tumor tissue from UCSD-006 project |
NP-RRBS-7T_set1_100ng-Jun28 | NP_RRBS_007T_100ng_20140628 | 7-T-1_1 | 13 | Rapid run/IGM | 2 | 100 | Solid tumor tissue from UCSD-007 project |
NP-RRBS-7T_set1_100ng-Jun28 | NP_RRBS_007T_100ng_20140628 | 7-T-2_1 | 15 | Rapid run/IGM | 2 | 100 | Solid tumor tissue from UCSD-007 project |
NP-RRBS-7T_set1_100ng-Jun28 | NP_RRBS_007T_100ng_20140628 | 7-T-3_1 | 27 | Rapid run/IGM | 2 | 100 | Solid tumor tissue from UCSD-007 project |
NP-RRBS-7T_set1_100ng-Jun28 | NP_RRBS_007T_100ng_20140628 | 7-T-4_1 | 19 | Rapid run/IGM | 2 | 100 | Solid tumor tissue from UCSD-007 project |
NP-RRBS-7T_set1_100ng-Jun28 | NP_RRBS_007T_100ng_20140628 | 7-T-5_1 | 21 | Rapid run/IGM | 2 | 100 | Solid tumor tissue from UCSD-007 project |
NP-RRBS-7T_set2_100ng-Jun28 | NP_RRBS_007T_100ng_20140628 | 7-T-1_2 | 14 | Rapid run/IGM | 2 | 100 | Solid tumor tissue from UCSD-007 project |
NP-RRBS-7T_set2_100ng-Jun28 | NP_RRBS_007T_100ng_20140628 | 7-T-2_2 | 16 | Rapid run/IGM | 2 | 100 | Solid tumor tissue from UCSD-007 project |
NP-RRBS-7T_set2_100ng-Jun28 | NP_RRBS_007T_100ng_20140628 | 7-T-3_2 | 18 | Rapid run/IGM | 2 | 100 | Solid tumor tissue from UCSD-007 project |
NP-RRBS-7T_set2_100ng-Jun28 | NP_RRBS_007T_100ng_20140628 | 7-T-4_2 | 20 | Rapid run/IGM | 2 | 100 | Solid tumor tissue from UCSD-007 project |
NP-RRBS-7T_set2_100ng-Jun28 | NP_RRBS_007T_100ng_20140628 | 7-T-5_2 | 22 | Rapid run/IGM | 2 | 100 | Solid tumor tissue from UCSD-007 project |
HiSeq Rapid run at Illumina ( XXXXXX)
- PE 100+7
- Library prep
- Need to double check with Dr. Zhang if he wants to sequence more plasma sequencing library from project UCSD-004-P (PC-P) and normal control (NC-P).
Original Library ID | Sample ID | TruSeq Index | Sequencing platform/at | Lane # | Inout DNA amount (ng) | Note |
NP-RRBS-6P_1ng-Jun29 | 6-P-1 | 13 | Rapid run/ILMN | 1 | 1 | Plasma from UCSD-006 project |
NP-RRBS-6P_1ng-Jun29 | 6-P-2 | 14 | Rapid run/ILMN | 1 | 1 | Plasma from UCSD-006 project |
NP-RRBS-6P_1ng-Jun29 | 6-P-3 | 15 | Rapid run/ILMN | 1 | 1 | Plasma from UCSD-006 project |
NP-RRBS-6P_1ng-Jun29 | 6-P-4 | 16 | Rapid run/ILMN | 1 | 1 | Plasma from UCSD-006 project |
NP-RRBS-6P_1ng-Jun29 | 6-P-5 | 27 | Rapid run/ILMN | 1 | 1 | Plasma from UCSD-006 project |
NP-RRBS-6P_1ng-Jun29 | 6-P-6 | 18 | Rapid run/ILMN | 1 | 1 | Plasma from UCSD-006 project |
NP-RRBS-6P_1ng-Jun29 | 6-P-7 | 19 | Rapid run/ILMN | 1 | 1 | Plasma from UCSD-006 project |
NP-RRBS-6P_1ng-Jun29 | 6-P-8 | 20 | Rapid run/ILMN | 1 | 1 | Plasma from UCSD-006 project |
NP-RRBS-6P_1ng-Jun29 | 6-P-9 | 21 | Rapid run/ILMN | 1 | 1 | Plasma from UCSD-006 project |
NP-RRBS-6P_1ng-Jun29 | 6-P-10 | 22 | Rapid run/ILMN | 1 | 1 | Plasma from UCSD-006 project |
NP-RRBS-7P_1ng-Jun29 | 7-P-1 | 1 | Rapid run/ILMN | 2 | 1 | Plasma from UCSD-007 project |
NP-RRBS-7P_1ng-Jun29 | 7-P-2 | 2 | Rapid run/ILMN | 2 | 1 | Plasma from UCSD-007 project |
NP-RRBS-7P_1ng-Jun29 | 7-P-3 | 4 | Rapid run/ILMN | 2 | 1 | Plasma from UCSD-007 project |
NP-RRBS-7P_1ng-Jun29 | 7-P-4 | 5 | Rapid run/ILMN | 2 | 1 | Plasma from UCSD-007 project |
NP-RRBS-7P_1ng-Jun29 | 7-P-5 | 6 | Rapid run/ILMN | 2 | 1 | Plasma from UCSD-007 project |
NP-RRBS-7P_1ng-Jun29 | 7-P-6 | 7 | Rapid run/ILMN | 2 | 1 | Plasma from UCSD-007 project |
NP-RRBS-7P_1ng-Jun29 | 7-P-7 | 8 | Rapid run/ILMN | 2 | 1 | Plasma from UCSD-007 project |
NP-RRBS-7P_1ng-Jun29 | 7-P-8 | 10 | Rapid run/ILMN | 2 | 1 | Plasma from UCSD-007 project |
NP-RRBS-7P_1ng-Jun29 | 7-P-9 | 11 | Rapid run/ILMN | 2 | 1 | Plasma from UCSD-007 project |
NP-RRBS-7P_1ng-Jun29 | 7-P-10 | 12 | Rapid run/ILMN | 2 | 1 | Plasma from UCSD-007 project |