Daniel:Notebook/Haplotyping/SISSORPipeline: Difference between revisions
Jump to navigation
Jump to search
>Djacobse (Created page with "=SISSOR Segmentation Pipeline= Back to Haplotyping Notebook == <calendar> name=Daniel:Notebook/Haplotyping format=%name/%year-%month-%day da...") |
>Djacobse |
||
Line 3: | Line 3: | ||
[[Daniel:Notebook/Haplotyping|Back to Haplotyping Notebook]] | [[Daniel:Notebook/Haplotyping|Back to Haplotyping Notebook]] | ||
== | The purpose of this section is to include data from my recreation/use of Eric's algorithm to properly segment SISSOR data. Since SISSOR has very low coverage, the samtools targetcut function does not properly identify fragments created in the microfluidic device. | ||
[[EricChu:LabNotesMDA/2014-4-16|Eric's Original Algorithm]] | |||
==Calendar== | |||
<calendar> | <calendar> |
Revision as of 20:20, 2 December 2014
SISSOR Segmentation Pipeline
The purpose of this section is to include data from my recreation/use of Eric's algorithm to properly segment SISSOR data. Since SISSOR has very low coverage, the samtools targetcut function does not properly identify fragments created in the microfluidic device.
Calendar
<calendar> name=Daniel:Notebook/Haplotyping format=%name/%year-%month-%day date=2014/02/01 view=oneyear </calendar>