Noi:Labnote tracking: Difference between revisions

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                               (samples from Kansas University)
                               (samples from Kansas University)
  14-12-04                    SeqCap Epi probe pool (UMR v1) hybridization capture on cancer patient
  14-12-04                    SeqCap Epi probe pool (UMR v1) hybridization capture on cancer patient
                               WGBS libraries (plasma/tumor tissue DNA)
                               WGBS libraries (plasma/tumor tissue DNA, )
                              2nd experiment (used 3 tubes of LMS SeqCap probe pool)
 
'''November 2014'''
  14-11-25                    Comparison of the efficiency between TruSeq adaptor and a customized  
  14-11-25                    Comparison of the efficiency between TruSeq adaptor and a customized  
                               unmethylated Y-adaptor with UMI
                               unmethylated Y-adaptor with UMI
  [[Noi/NOTES/2014-11-4|14-12-04]]                    SeqCap Epi probe pool (UMR v1) hybridization capture on normal and cancer  
  [[Noi/NOTES/2014-11-4|14-12-04]]                    SeqCap Epi probe pool (UMR v1) hybridization capture on normal and cancer  
                               patient WGBS libraries (First Experiment)
                               patient WGBS libraries  
                              1st Experiment (used 2 tubes of LMS SeqCap probe pool)
                               <u>Also included</u>  
                               <u>Also included</u>  
                               Part I: Re-amplification of WGBS libraries of normal plasma samples
                               Part I: Re-amplification of WGBS libraries of normal plasma samples
'''October 2014'''
14-10-31                    Repeating of BIS/DNA SMART ChIP-Seq protocol
14-10-29                    Generation of sequencing library of a customized SeqCap EZ Epi Probe Pool to decode the sequences
                              of LMS SeqCap probe pool
                              Library generated by DNA SMART ChIP Seq Kit

Revision as of 12:28, 24 December 2014

Labnote tracking

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Date                         Description
December 2014
14-12-11                     RRBS library prep, mouse hippocampus gDNA (Zhou's lab)
14-12-08                     LMS + CRC BSPP capture on WGBS libraries prepared from ctDNA
                             of CRC patient (Illumina)
14-12-05                     WGBS library prep and BSPP capture of cfDNA from Illumina (with Li Liu)
                             ctDNA of colorectal cancer (CRC) patients from Illumina 
                             (samples from Kansas University)
14-12-04                     SeqCap Epi probe pool (UMR v1) hybridization capture on cancer patient
                             WGBS libraries (plasma/tumor tissue DNA, )
                             2nd experiment (used 3 tubes of LMS SeqCap probe pool)
November 2014
14-11-25                     Comparison of the efficiency between TruSeq adaptor and a customized 
                             unmethylated Y-adaptor with UMI
14-12-04                     SeqCap Epi probe pool (UMR v1) hybridization capture on normal and cancer 
                             patient WGBS libraries 
                             1st Experiment (used 2 tubes of LMS SeqCap probe pool)
                             Also included 
                             Part I: Re-amplification of WGBS libraries of normal plasma samples
October 2014
14-10-31                     Repeating of BIS/DNA SMART ChIP-Seq protocol
14-10-29                     Generation of sequencing library of a customized SeqCap EZ Epi Probe Pool to decode the sequences
                             of LMS SeqCap probe pool
                             Library generated by DNA SMART ChIP Seq Kit