Noi:Labnote tracking: Difference between revisions
Jump to navigation
Jump to search
>Noi mNo edit summary |
>Noi mNo edit summary |
||
Line 11: | Line 11: | ||
(samples from Kansas University) | (samples from Kansas University) | ||
14-12-04 SeqCap Epi probe pool (UMR v1) hybridization capture on cancer patient | 14-12-04 SeqCap Epi probe pool (UMR v1) hybridization capture on cancer patient | ||
WGBS libraries (plasma/tumor tissue DNA) | WGBS libraries (plasma/tumor tissue DNA, ) | ||
2nd experiment (used 3 tubes of LMS SeqCap probe pool) | |||
'''November 2014''' | |||
14-11-25 Comparison of the efficiency between TruSeq adaptor and a customized | 14-11-25 Comparison of the efficiency between TruSeq adaptor and a customized | ||
unmethylated Y-adaptor with UMI | unmethylated Y-adaptor with UMI | ||
[[Noi/NOTES/2014-11-4|14-12-04]] SeqCap Epi probe pool (UMR v1) hybridization capture on normal and cancer | [[Noi/NOTES/2014-11-4|14-12-04]] SeqCap Epi probe pool (UMR v1) hybridization capture on normal and cancer | ||
patient WGBS libraries ( | patient WGBS libraries | ||
1st Experiment (used 2 tubes of LMS SeqCap probe pool) | |||
<u>Also included</u> | <u>Also included</u> | ||
Part I: Re-amplification of WGBS libraries of normal plasma samples | Part I: Re-amplification of WGBS libraries of normal plasma samples | ||
'''October 2014''' | |||
14-10-31 Repeating of BIS/DNA SMART ChIP-Seq protocol | |||
14-10-29 Generation of sequencing library of a customized SeqCap EZ Epi Probe Pool to decode the sequences | |||
of LMS SeqCap probe pool | |||
Library generated by DNA SMART ChIP Seq Kit |
Revision as of 12:28, 24 December 2014
Labnote tracking
Date Description December 2014 14-12-11 RRBS library prep, mouse hippocampus gDNA (Zhou's lab) 14-12-08 LMS + CRC BSPP capture on WGBS libraries prepared from ctDNA of CRC patient (Illumina) 14-12-05 WGBS library prep and BSPP capture of cfDNA from Illumina (with Li Liu) ctDNA of colorectal cancer (CRC) patients from Illumina (samples from Kansas University) 14-12-04 SeqCap Epi probe pool (UMR v1) hybridization capture on cancer patient WGBS libraries (plasma/tumor tissue DNA, ) 2nd experiment (used 3 tubes of LMS SeqCap probe pool)
November 2014 14-11-25 Comparison of the efficiency between TruSeq adaptor and a customized unmethylated Y-adaptor with UMI 14-12-04 SeqCap Epi probe pool (UMR v1) hybridization capture on normal and cancer patient WGBS libraries 1st Experiment (used 2 tubes of LMS SeqCap probe pool) Also included Part I: Re-amplification of WGBS libraries of normal plasma samples
October 2014 14-10-31 Repeating of BIS/DNA SMART ChIP-Seq protocol 14-10-29 Generation of sequencing library of a customized SeqCap EZ Epi Probe Pool to decode the sequences of LMS SeqCap probe pool Library generated by DNA SMART ChIP Seq Kit