Daniel:Notebook/ComboLock/ExperimentList: Difference between revisions
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<li>T4Poly-Testing Circularization methods including t4 polymerase/ligase and hot-starting phusion (3/15/2017)</li> | |||
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Revision as of 22:45, 15 March 2017
Experiment List
This page is a list of experiments performed in ComboLock and the corresponding dates to those experiments
2017
March 2017
- Version 3 Oligos-Padlock0601 Test (3/1/2017) <dynamicpagelist> category=ComboLock category=20170301 </dynamicpagelist>
- Bolt Test-Ligation reaction connecting the C probes for a padlock binding target (3/8/2017) <dynamicpagelist> category=ComboLock category=20170308 </dynamicpagelist>
- T4Poly-Testing Circularization methods including t4 polymerase/ligase and hot-starting phusion (3/15/2017) <dynamicpagelist> category=ComboLock category=20170315 </dynamicpagelist>
February 2017
- Version 2 Oligos Test 2 (2/2/2017) <dynamicpagelist> category=ComboLock category=20170202 </dynamicpagelist>
- Version 3 Oligos-Low Temps (2/7/2017) <dynamicpagelist> category=ComboLock category=20170207 </dynamicpagelist>
- Beads Binding Test (2/9/2017)-Tests the efficiency of binding for the biotin-template to the beads and especially the C probes to the template. Also focuses on the temperature-dependent efficiency of wash/incubation steps <dynamicpagelist> category=ComboLock category=20170209 </dynamicpagelist>
January 2017
- Version 2 Oligos - Short Oligonucleotides (1/9/2017) <dynamicpagelist> category=ComboLock category=20170106 </dynamicpagelist>
- Version 3 Oligos - Normal Length Adapters, Lock Oligos, Phosphates Attached (1/13/2017) <dynamicpagelist> category=ComboLock category=20170113 </dynamicpagelist>
- RCA Test Dilutions - (1/23/2017) - Uses C4-C2 amplicon and Padlock0501 to test circularization and RCA effects <dynamicpagelist> category=ComboLock category=20170123 </dynamicpagelist>
- RCA Time Test - (1/27/2017) - Testing Various RCA conditions incl time <dynamicpagelist> category=ComboLock category=20170127 </dynamicpagelist>
2016
December 2016
- Mirror C Probe - Overnight capture (12/15/2016) <dynamicpagelist> category=ComboLock category=20161215 </dynamicpagelist>
- Mirror C Probe Test (12/13/2016) <dynamicpagelist> category=ComboLock category=20161213 </dynamicpagelist>
November 2016
- Antibody Binding Positive Control Test (11/03/2016) <dynamicpagelist> category=ComboLock category=20161103 </dynamicpagelist>
- Cell Test with RCA (11/07/2016) <dynamicpagelist> category=ComboLock category=20161107 </dynamicpagelist>
- Antibody Binding Positive Control Test 2 (11/15/2016) <dynamicpagelist> category=ComboLock category=20161115 </dynamicpagelist>
- Circularization Test 2 (11/22/2016) <dynamicpagelist> category=ComboLock category=20161122 </dynamicpagelist>
- Extended Latch Test (11/29/2016) <dynamicpagelist> category=ComboLock category=20161129 </dynamicpagelist>
October 2016
- C-Probe Positive Control Test (10/05/2016) <dynamicpagelist> category=ComboLock category=20161005 </dynamicpagelist>
- Padlock0301 Test (C-Probe Positive Control Template; 10/07/2016) <dynamicpagelist> category=ComboLock category=20161007 </dynamicpagelist>
- Padlock0301 Dilutions Test (10/13/2016) <dynamicpagelist> category=ComboLock category=20161013 </dynamicpagelist>
- BSA Ab-Oligo Linkage (10/14/2016) <dynamicpagelist> category=ComboLock category=20161014 </dynamicpagelist>
- Cell Test with Padlock0201 (10/17/2016) <dynamicpagelist> category=ComboLock category=20161017 </dynamicpagelist>
- Cell Test 2 (10/18/2016) <dynamicpagelist> category=ComboLock category=20161018 </dynamicpagelist>
- Cell Test 3-Time Course Experiment (10/21/2016) <dynamicpagelist> category=ComboLock category=20161021 </dynamicpagelist>
- Beads UMI Test (10/27/2016) <dynamicpagelist> category=ComboLock category=20161027 </dynamicpagelist>
- Circularization Test (10/31/2016) <dynamicpagelist> category=ComboLock category=20161031 </dynamicpagelist>
September 2016
- Positive Control Amplicon PCR Test, Primer Concentration (09/22/2016) <dynamicpagelist> category=ComboLock category=20160922 </dynamicpagelist>
- PCAmp4 Production (09/28/2016) <dynamicpagelist> category=ComboLock category=20160928 </dynamicpagelist>
- PC amplification test using (P12RC/P2) amplification primers(09/29/2016) <dynamicpagelist> category=ComboLock category=20160929 </dynamicpagelist>
- Padlock0201 test including primer amplification (Adapter is now primer24 sequence; 09/30/2016) <dynamicpagelist> category=ComboLock category=20160930 </dynamicpagelist>
August 2016
- Positive Control Amplicon Production (08/05/2016) <dynamicpagelist> category=ComboLock category=20160805 </dynamicpagelist>
- Positive Control Amplicon Test (08/18/2016) <dynamicpagelist> category=ComboLock category=20160818 </dynamicpagelist>
- Positive Control Amplicon Production 2 (08/23/2016) <dynamicpagelist> category=ComboLock category=20160823 </dynamicpagelist>
- Positive Control Amplicon Test 2 (08/22/2016) <dynamicpagelist> category=ComboLock category=20160822 </dynamicpagelist>
- Positive Control Dilution-X2(08/26/2016) <dynamicpagelist> category=ComboLock category=20160826 </dynamicpagelist>
- Positive Control-X3 (08/29/2016) <dynamicpagelist> category=ComboLock category=20160829 </dynamicpagelist>
July 2016
- C Probe SOD1/VIM Test 2 (7-1-2016) <dynamicpagelist> category=ComboLock category=20160701 </dynamicpagelist>
- Sequential Hybridization Test (7-5-2016) <dynamicpagelist> category=ComboLock category=20160705 </dynamicpagelist>
- Double Hybridization (C Probes+Antibodies) <dynamicpagelist> category=ComboLock category=20160707 </dynamicpagelist>
- Million Fold Test (SOD1) <dynamicpagelist> category=ComboLock category=20160711 </dynamicpagelist>
- C Probes (VIM+SOD1) with Stringent Washes <dynamicpagelist> category=ComboLock category=20160718 </dynamicpagelist>
- Latch 100X and Dextran Test <dynamicpagelist> category=ComboLock category=20160725 </dynamicpagelist>
- Phusion Test <dynamicpagelist> category=ComboLock category=20160728 </dynamicpagelist>
June 2016
- Stage 2 Test (C Probe, VIM, 6-23-2016) <dynamicpagelist> category=ComboLock category=20160623 </dynamicpagelist>
- Antibody Stage 2 Test 1 (6-27-2016) <dynamicpagelist> category=ComboLock category=20160627 </dynamicpagelist>
- Antibody Stage 2 Test 2 (6-28-2016) <dynamicpagelist> category=ComboLock category=20160628 </dynamicpagelist>
- C Probe SOD1/VIM Test 1 (6-29-2016) <dynamicpagelist> category=ComboLock category=20160629 </dynamicpagelist>