Alice:LabNotes/2007-12-5: Difference between revisions

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[[Image:SNP 7.png]]<br>
[[Image:SNP 7.png]]<br>
The two samples we are really interested in are sample #6 and #7. The sample is GM20431 cDNA with rs 1264899 forward and reverse primer. The SNP location is rs 1264899. Then we will use software PeakPicker to compare and quantize the peaks.<br>
The two samples we are really interested in are sample #6 and #7. The sample is GM20431 cDNA with rs 1264899 forward and reverse primer. The SNP location is rs 1264899. Then we will use software PeakPicker to compare and quantize the peaks.<br>
Here are the files of the original sequencing result files:<br>
Here is the files of the original sequencing result files:<br>
* [https://genome-tech.ucsd.edu/LabNotes/index.php/Alice:LabNotes/2007-12-5/ZL1-cust.ab1 ZL1-cust] <br>
* [https://genome-tech.ucsd.edu/LabNotes/index.php/Alice:LabNotes/2007-12-5/ZL2-cust.ab1 ZL2-cust]<br>
* [https://genome-tech.ucsd.edu/LabNotes/index.php/Alice:LabNotes/2007-12-5/ZL3-cust.ab1 ZL3-cust]<br>
* [https://genome-tech.ucsd.edu/LabNotes/index.php/Alice:LabNotes/2007-12-5/ZL4-cust.ab1 ZL4-cust]<br>
* [https://genome-tech.ucsd.edu/LabNotes/index.php/Alice:LabNotes/2007-12-5/ZL5-cust.ab1 ZL5-cust]<br>
* [https://genome-tech.ucsd.edu/LabNotes/index.php/Alice:LabNotes/2007-12-5/ZL6-cust.ab1 ZL6-cust]<br>
* [https://genome-tech.ucsd.edu/LabNotes/index.php/Alice:LabNotes/2007-12-5/ZL7-cust.ab1 ZL7-cust]<br>

Revision as of 05:52, 1 January 2008

The sequencing results finally worked!

Sample SNP Sequencing result
1 rs3753565 yes
2 rs2295680 yes
3 rs6103 no
4 rs1264899 yes
5 rs1264899 yes
6 rs1264899 yes
7 rs1264899 yes

Sample 1
File:SNP 1.png
Sample 2
File:SNP 2.png
Sample 4
File:SNP 4.png
Sample 5
File:SNP 5.png
Sample 6
File:SNP 6.png
Sample 7
File:SNP 7.png
The two samples we are really interested in are sample #6 and #7. The sample is GM20431 cDNA with rs 1264899 forward and reverse primer. The SNP location is rs 1264899. Then we will use software PeakPicker to compare and quantize the peaks.
Here is the files of the original sequencing result files: