Sample record: Difference between revisions
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>Alan6017518 |
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| align="center" style="background:#f0f0f0;"|'''# filtered reads (bps)''' | | align="center" style="background:#f0f0f0;"|'''# filtered reads (bps)''' | ||
|- | |- | ||
| | | 110318||HL090||S1||AL-Exome-cAWS#1-Mar18||Zhang Lab||80|| | ||
|- | |- | ||
| | | 110318||HL090||S2||AL-Exome-cAWS#1-Mar18||Zhang Lab||80|| | ||
|- | |- | ||
| | | 110318||HL090||S3||AL-Exome-HGPS-Mar18||Zhang Lab||80|| | ||
|- | |- | ||
| | | 110318||HL090||S4||AL-Exome-HGPS-Mar18||Zhang Lab||80|| | ||
|- | |- | ||
| | | 110318||HL090||S5||AL-Exome-cHGPS#1-Mar18||Zhang Lab||80|| | ||
|- | |- | ||
| | | 110318||HL090||S6||AL-Exome-cHGPS#1-Mar18||Zhang Lab||80|| | ||
|- | |- | ||
| | | 110318||HL090||S7||Al-Exome-AWS-Mar18||Zhang Lab||80|| | ||
|- | |- | ||
| | | 110318||HL090||S8||Al-Exome-AWS-Mar18||Zhang Lab||80|| | ||
|- | |- | ||
| | | 110307||HL089||S1||NP-220K-PGP_Exp1-3_Ind1-7-Feb14||Zhang Lab||80+6+80|| | ||
|- | |- | ||
| | | 110307||HL089||S2||NP-220K-PGP_Exp1-3_Ind1-7-Feb14||Zhang Lab||80+6+80|| | ||
|- | |- | ||
| | | 110307||HL089||S3||NP-220K-Parkinson_Ind1-18-Feb15||Zhang Lab||80+6+80|| | ||
|- | |- | ||
| | | 110307||HL089||S4||NP-220K-Parkinson_Ind1-18-Feb15||Zhang Lab||80+6+80|| | ||
|- | |- | ||
| | | 110307||HL089||S5||NP-220K-Parkinson_Ind1-18-Feb15||Zhang Lab||80+6+80|| | ||
|- | |- | ||
| | | 110307||HL089||S6||NP-220K-Parkinson_Ind1-18-Feb15||Zhang Lab||80+6+80|| | ||
|- | |- | ||
| | | 110307||HL089||S7||NP-220K-Parkinson_Ind1-18-Feb15||Zhang Lab||80+6+80|| | ||
|- | |- | ||
| 110112||HL086||S8||NP-AfricanUPenn.Ind1to48-Jan3||Zhang Lab||100+6|| | | 110307||HL089||S8||NP-220K-Parkinson_Ind1-18-Feb15||Zhang Lab||80+6+80|| | ||
|- | |||
| 110303||HL088||S1||AL-MsExome-2eiPS2P5-Feb4||Zhang Lab||80+6||2,735,432,000 | |||
|- | |||
| 110303||HL088||S2||AL-MsExome-2eiPS2P5-Feb4||Zhang Lab||80+6||2,802,442,000 | |||
|- | |||
| 110303||HL088||S3||AL-MsExome-Ie12P20-Feb4||Zhang Lab||80+6||2,676,336,000 | |||
|- | |||
| 110303||HL088||S4||AL-MsExome-Ie12P20-Feb4||Zhang Lab||80+6||2,683,055,000 | |||
|- | |||
| 110303||HL088||S5||AL-MsExome-B6MEF-Feb4||Zhang Lab||80+6||2,612,353,000 | |||
|- | |||
| 110303||HL088||S6||AL-MsExome-B6MEF-Feb4||Zhang Lab||80+6||2,650,632,000 | |||
|- | |||
| 110303||HL088||S7||AL-Exome-HuSc-Mar2||Zhang Lab||80+6||2,688,100,000 | |||
|- | |||
| 110303||HL088||S8||NP-220K-African_UPenn1_3-Feb16||Zhang Lab||80+6||2,856,129,000 | |||
|- | |||
| 110119||HL087||S1||AL-exome-2HFF_P6-Jan16||Zhang Lab||80+7+80||3,152,150,000 | |||
|- | |||
| 110119||HL087||S2||AL-exome-2HFF_7_10_3M-Jan16||Zhang Lab||80+7+80||3,216,929,000 | |||
|- | |||
| 110119||HL087||S3||AL-exome-2HFF_8d_10-Jan16||Zhang Lab||80+7+80||3,230,879,000 | |||
|- | |||
| 110119||HL087||S4||HC-MDA-Ecoli-SAGs(NX1-NX8)-Jan17||Zhang Lab||80+7+80||2,531,830,000 | |||
|- | |||
| 110119||HL087||S5||MouseMetaGen.SetA.Ind13to16-Dec15||Zhang Lab||80+7+80||2,831,831,000 | |||
|- | |||
| 110119||HL087||S6||MouseMetaGen.SetA.Ind13to16-Dec15||Zhang Lab||80+7+80||2,788,825,000 | |||
|- | |||
| 110119||HL087||S7||MouseMetaGen.SetA.Ind13to16-Dec15||Zhang Lab||80+7+80||2,804,556,000 | |||
|- | |||
| 110119||HL087||S8||MouseMetaGen.SetA.Ind13to16-Dec15||Zhang Lab||80+7+80||2,755,653,000 | |||
|- | |||
| 110112||HL086||S1||NP-PGP.Ind13to21-Dec14||Zhang Lab||100+6||2,946,977,000 | |||
|- | |||
| 110112||HL086||S2||NP-PGP.Ind13to21-Dec14||Zhang Lab||100+6||3,142,124,000 | |||
|- | |||
| 110112||HL086||S3||NP-PGP.Ind13to21-Dec14||Zhang Lab||100+6||3,043,874,000 | |||
|- | |||
| 110112||HL086||S4||NP-PGP.Ind13to21-Dec14||Zhang Lab||100+6||3,134,949,000 | |||
|- | |||
| 110112||HL086||S5||NP-PGP.Ind13to21-Dec14||Zhang Lab||100+6||3,031,047,000 | |||
|- | |||
| 110112||HL086||S6||NP-TumorJHU.Ind1to48-Dec18||Zhang Lab||100+6||3,476,486,000 | |||
|- | |||
| 110112||HL086||S7||NP-AfricanUPenn.Ind1to48-Jan3||Zhang Lab||100+6||3,599,069,000 | |||
|- | |||
| 110112||HL086||S8||NP-AfricanUPenn.Ind1to48-Jan3||Zhang Lab||100+6||3,505,520,000 | |||
|} | |} | ||
Revision as of 16:57, 21 March 2011
2011
Jan-Jun
Date | Run | Lane | Tube Label | Seq facility | Read length | # filtered reads (bps) |
110318 | HL090 | S1 | AL-Exome-cAWS#1-Mar18 | Zhang Lab | 80 | |
110318 | HL090 | S2 | AL-Exome-cAWS#1-Mar18 | Zhang Lab | 80 | |
110318 | HL090 | S3 | AL-Exome-HGPS-Mar18 | Zhang Lab | 80 | |
110318 | HL090 | S4 | AL-Exome-HGPS-Mar18 | Zhang Lab | 80 | |
110318 | HL090 | S5 | AL-Exome-cHGPS#1-Mar18 | Zhang Lab | 80 | |
110318 | HL090 | S6 | AL-Exome-cHGPS#1-Mar18 | Zhang Lab | 80 | |
110318 | HL090 | S7 | Al-Exome-AWS-Mar18 | Zhang Lab | 80 | |
110318 | HL090 | S8 | Al-Exome-AWS-Mar18 | Zhang Lab | 80 | |
110307 | HL089 | S1 | NP-220K-PGP_Exp1-3_Ind1-7-Feb14 | Zhang Lab | 80+6+80 | |
110307 | HL089 | S2 | NP-220K-PGP_Exp1-3_Ind1-7-Feb14 | Zhang Lab | 80+6+80 | |
110307 | HL089 | S3 | NP-220K-Parkinson_Ind1-18-Feb15 | Zhang Lab | 80+6+80 | |
110307 | HL089 | S4 | NP-220K-Parkinson_Ind1-18-Feb15 | Zhang Lab | 80+6+80 | |
110307 | HL089 | S5 | NP-220K-Parkinson_Ind1-18-Feb15 | Zhang Lab | 80+6+80 | |
110307 | HL089 | S6 | NP-220K-Parkinson_Ind1-18-Feb15 | Zhang Lab | 80+6+80 | |
110307 | HL089 | S7 | NP-220K-Parkinson_Ind1-18-Feb15 | Zhang Lab | 80+6+80 | |
110307 | HL089 | S8 | NP-220K-Parkinson_Ind1-18-Feb15 | Zhang Lab | 80+6+80 | |
110303 | HL088 | S1 | AL-MsExome-2eiPS2P5-Feb4 | Zhang Lab | 80+6 | 2,735,432,000 |
110303 | HL088 | S2 | AL-MsExome-2eiPS2P5-Feb4 | Zhang Lab | 80+6 | 2,802,442,000 |
110303 | HL088 | S3 | AL-MsExome-Ie12P20-Feb4 | Zhang Lab | 80+6 | 2,676,336,000 |
110303 | HL088 | S4 | AL-MsExome-Ie12P20-Feb4 | Zhang Lab | 80+6 | 2,683,055,000 |
110303 | HL088 | S5 | AL-MsExome-B6MEF-Feb4 | Zhang Lab | 80+6 | 2,612,353,000 |
110303 | HL088 | S6 | AL-MsExome-B6MEF-Feb4 | Zhang Lab | 80+6 | 2,650,632,000 |
110303 | HL088 | S7 | AL-Exome-HuSc-Mar2 | Zhang Lab | 80+6 | 2,688,100,000 |
110303 | HL088 | S8 | NP-220K-African_UPenn1_3-Feb16 | Zhang Lab | 80+6 | 2,856,129,000 |
110119 | HL087 | S1 | AL-exome-2HFF_P6-Jan16 | Zhang Lab | 80+7+80 | 3,152,150,000 |
110119 | HL087 | S2 | AL-exome-2HFF_7_10_3M-Jan16 | Zhang Lab | 80+7+80 | 3,216,929,000 |
110119 | HL087 | S3 | AL-exome-2HFF_8d_10-Jan16 | Zhang Lab | 80+7+80 | 3,230,879,000 |
110119 | HL087 | S4 | HC-MDA-Ecoli-SAGs(NX1-NX8)-Jan17 | Zhang Lab | 80+7+80 | 2,531,830,000 |
110119 | HL087 | S5 | MouseMetaGen.SetA.Ind13to16-Dec15 | Zhang Lab | 80+7+80 | 2,831,831,000 |
110119 | HL087 | S6 | MouseMetaGen.SetA.Ind13to16-Dec15 | Zhang Lab | 80+7+80 | 2,788,825,000 |
110119 | HL087 | S7 | MouseMetaGen.SetA.Ind13to16-Dec15 | Zhang Lab | 80+7+80 | 2,804,556,000 |
110119 | HL087 | S8 | MouseMetaGen.SetA.Ind13to16-Dec15 | Zhang Lab | 80+7+80 | 2,755,653,000 |
110112 | HL086 | S1 | NP-PGP.Ind13to21-Dec14 | Zhang Lab | 100+6 | 2,946,977,000 |
110112 | HL086 | S2 | NP-PGP.Ind13to21-Dec14 | Zhang Lab | 100+6 | 3,142,124,000 |
110112 | HL086 | S3 | NP-PGP.Ind13to21-Dec14 | Zhang Lab | 100+6 | 3,043,874,000 |
110112 | HL086 | S4 | NP-PGP.Ind13to21-Dec14 | Zhang Lab | 100+6 | 3,134,949,000 |
110112 | HL086 | S5 | NP-PGP.Ind13to21-Dec14 | Zhang Lab | 100+6 | 3,031,047,000 |
110112 | HL086 | S6 | NP-TumorJHU.Ind1to48-Dec18 | Zhang Lab | 100+6 | 3,476,486,000 |
110112 | HL086 | S7 | NP-AfricanUPenn.Ind1to48-Jan3 | Zhang Lab | 100+6 | 3,599,069,000 |
110112 | HL086 | S8 | NP-AfricanUPenn.Ind1to48-Jan3 | Zhang Lab | 100+6 | 3,505,520,000 |
2010
Jul-Dec
Date | Run | Lane | Tube Label | Seq facility | Read length | # filtered reads (bps) |
101209 | HL085 | S1 | AL-Exome-aMSC_p7-Dec7 | Zhang Lab | 80+7+80 | 2,801,366,000 |
101209 | HL085 | S2 | AL-Exome-MSC_iPS4_p14-Dec7 | Zhang Lab | 80+7+80 | 2,963,206,000 |
101209 | HL085 | S3 | AL-Exome-MSC_iPS8_p14-Dec7 | Zhang Lab | 80+7+80 | 3,149,351,000 |
101209 | HL085 | S4 | AL-Exome-KiPS3F7_p29-Dec7 | Zhang Lab | 80+7+80 | 2,935,861,000 |
101209 | HL085 | S5 | NP-Mm-IMR90-Nov23 | Zhang Lab | 80+7+80 | 2,590,543,000 |
101209 | HL085 | S6 | NP-Mm-IMR90-Nov23 | Zhang Lab | 80+7+80 | 2,572,362,000 |
101209 | HL085 | S7 | NP-Mm-IMR90-Nov23 | Zhang Lab | 80+7+80 | 2,587,222,000 |
101209 | HL085 | S8 | KZ-Lancelet_3_Lib-Sep10 | Zhang Lab | 80+7+80 | 2,103,198,000 |
101203 | HL084 | S1 | AL-Exome-Olf_MSC-Nov30_Nextera | Zhang Lab | 80 | 2,832,310,000 |
101203 | HL084 | S2 | AL-Exome-Olf_MSC-Nov30_Nextera | Zhang Lab | 80 | 2,848,472,000 |
101203 | HL084 | S3 | AL-Exome-Olf_CD34+-Nov30_Nextera | Zhang Lab | 80 | 2,484,395,000 |
101203 | HL084 | S4 | AL-Exome-Olf_CD34+-Nov30_Nextera | Zhang Lab | 80 | 2,506,430,000 |
101203 | HL084 | S5 | AL-Exome-KiPS-Nov30_Nextera | Zhang Lab | 80 | 2,774,503,000 |
101203 | HL084 | S6 | AL-Exome-KiPS-Nov30_Nextera | Zhang Lab | 80 | 2,827,796,000 |
101203 | HL084 | S7 | AL-Exome-KiPS_CD34+-Nov30_Nextera | Zhang Lab | 80 | 2,686,185,000 |
101203 | HL084 | S8 | AL-Exome-KiPS_CD34+-Nov30_Nextera | Zhang Lab | 80 | 2,625,599,000 |
101123 | HL083 | S1 | AL-Exome-FiPS_4F5_P15-Nov22 | Zhang Lab | 80+7+80 | 2,866,535,000 |
101123 | HL083 | S2 | AL-Exome-FiPS_4F5_P44-Nov22 | Zhang Lab | 80+7+80 | 2,786,330,000 |
101123 | HL083 | S3 | AL-Exome-Plvthm_Rb4_D_P10-Nov12 | Zhang Lab | 80+7+80 | 2,663,488,000 |
101123 | HL083 | S4 | HC-MDA-Ecoli-SAGs(Ind1to8)-Nov15 | Zhang Lab | 80+7+80 | 2,809,612,000 |
101123 | HL083 | S5 | AL-Exome-HFF_P5-Nov22 | Zhang Lab | 80+7+80 | 3,075,773,000 |
101123 | HL083 | S6 | AL-Exome-38H1C_6_P10-Nov22 | Zhang Lab | 80+7+80 | 2,680,754,000 |
101123 | HL083 | S7 | NP-SAG-MouseGutSetb-Nov4 | Zhang Lab | 80+7+80 | 3,067,120,000 |
101123 | HL083 | S8 | UCSD-BB-TM_Solexa1-Oct28 | Zhang Lab | 80+7+80 | 1,836,366,000 |
101117 | HL082 | S1 | AL-Exome-FiPS_4F2_P9-Nov12 | Zhang Lab | 80 | 2,320,956,000 |
101117 | HL082 | S2 | AL-Exome-FiPS_4F2_P9-Nov12 | Zhang Lab | 80 | 2,404,301,000 |
101117 | HL082 | S3 | AL-Exome-FiPS_4F2_P40-Nov12 | Zhang Lab | 80 | 2,422,202,000 |
101117 | HL082 | S4 | AL-Exome-FiPS_4F2_P40-Nov12 | Zhang Lab | 80 | 2,425,803,000 |
101117 | HL082 | S5 | AL-Exome-Plvthm_Rb4_5_P10-Nov12 | Zhang Lab | 80 | 2,451,276,000 |
101117 | HL082 | S6 | AL-Exome-Plvthm_Rb4_5_P10-Nov12 | Zhang Lab | 80 | 2,459,732,000 |
101117 | HL082 | S7 | AL-Exome-IMR90_P4-Nov12 | Zhang Lab | 80 | 2,549,279,000 |
101117 | HL082 | S8 | AL-Exome-IMR90_P4-Nov12 | Zhang Lab | 80 | 2,470,636,000 |
101108 | HL081 | S1 | KZ-Lancelet_3_Lib-Sep10 | Zhang Lab | 80+7+80 | 2,345,534,000 |
101108 | HL081 | S2 | KZ-Lancelet_3_Lib-Sep10 | Zhang Lab | 80+7+80 | 2,413,314,000 |
101108 | HL081 | S3 | KZ-Lancelet_3_Lib-Sep10 | Zhang Lab | 80+7+80 | 2,407,128,000 |
101108 | HL081 | S4 | KZ-Lancelet_3_Lib-Sep10 | Zhang Lab | 80+7+80 | 2,413,251,000 |
101108 | HL081 | S5 | KZ-Lancelet_3_Lib-Sep10 | Zhang Lab | 80+7+80 | 2,409,447,000 |
101108 | HL081 | S6 | NP-SAG-MouseGutSetA.Ind1-12-Oct28 | Zhang Lab | 80+7+80 | 3,044,539,000 |
101108 | HL081 | S7 | NP-SAG-MouseGutSetA.Ind1-12-Oct28 | Zhang Lab | 80+7+80 | 3,008,164,000 |
101108 | HL081 | S8 | NP-SAG-MouseGutSetA.Ind1-12-Oct28 | Zhang Lab | 80+7+80 | 2,928,597,000 |
101030 | HL080 | S1 | DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 | Zhang Lab | 80+7+80 | 1,295,516,000 |
101030 | HL080 | S2 | NP-SAG-MouseGutSetA.Ind1-12-Oct28 | Zhang Lab | 80+7+80 | 1,677,814,000 |
101030 | HL080 | S3 | UCSD-BB-TM_Solexa1-Oct28 | Zhang Lab | 80+7+80 | 1,168,578,000 |
101030 | HL080 | S4 | KZ-Lancelet_6_Lib-Se10 | Zhang Lab | 80+7+80 | 143,044,000 |
101030 | HL080 | S5 | KZ-Lancelet_6_Lib-Se10 | Zhang Lab | 80+7+80 | 142,647,000 |
101030 | HL080 | S6 | KZ-Lancelet_6_Lib-Se10 | Zhang Lab | 80+7+80 | 152,233,000 |
101030 | HL080 | S7 | KZ-Lancelet_6_Lib-Se10 | Zhang Lab | 80+7+80 | 148,587,000 |
101030 | HL080 | S8 | KZ-Lancelet_3_Lib-Sep10 | Zhang Lab | 80+7+80 | 1,934,932,000 |
101026 | HL079 | S1 | AL-Exome-MMTA-Jun29-Belmonte1 | Zhang Lab | 80+7 | 1,377,624,000 |
101026 | HL079 | S2 | AL-Exome-MMTA-Jun29-Belmonte1 | Zhang Lab | 80+7 | 1,217,203,000 |
101026 | HL079 | S3 | JG-PGP1-Chr-Lib-Oct22 | Zhang Lab | 80+7 | 474,667,000 |
101026 | HL079 | S4 | DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 | Zhang Lab | 80+7 | 1,428,659,000 |
101026 | HL079 | S5 | DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 | Zhang Lab | 80+7 | 1,191,736,000 |
101026 | HL079 | S6 | DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 | Zhang Lab | 80+7 | 1,956,053,000 |
101026 | HL079 | S7 | DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX | Zhang Lab | 80+7 | 1,978,414,000 |
101026 | HL079 | S8 | DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX | Zhang Lab | 80+7 | 1,924,357,000 |
101021 | HL078 | S1 | AL-Exome-hNSC-Aug14-Belmonte | Zhang Lab | 80+7 | |
101021 | HL078 | S2 | AL-Exome-hNSC-Aug14-Belmonte | Zhang Lab | 80+7 | |
101021 | HL078 | S3 | AL-Exome-NiPS2F-Aug14-Belmonte | Zhang Lab | 80+7 | |
101021 | HL078 | S4 | AL-Exome-NiPS2F-Aug14-Belmonte | Zhang Lab | 80+7 | |
101021 | HL078 | S5 | DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 | Zhang Lab | 80+7 | |
101021 | HL078 | S6 | DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 | Zhang Lab | 80+7 | |
101021 | HL078 | S7 | DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX | Zhang Lab | 80+7 | |
101021 | HL078 | S8 | DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX | Zhang Lab | 80+7 | |
101016 | HL077 | S1 | AL-Exome-AST-Oct4 | Zhang Lab | 80+7 | 1,913,314,000 |
101016 | HL077 | S2 | AL-Exome-AST-Oct4 | Zhang Lab | 80+7 | 1,977,248,000 |
101016 | HL077 | S3 | AL-Exome-ASTiPS4F_4-Oct4 | Zhang Lab | 80+7 | 2,205,330,000 |
101016 | HL077 | S4 | AL-Exome-ASTiPS4F_4-Oct4 | Zhang Lab | 80+7 | 2,146,837,000 |
101016 | HL077 | S5 | AL-Exome-ASTiPS4F_5-Oct4 | Zhang Lab | 80+7 | 2,449,641,000 |
101016 | HL077 | S6 | AL-Exome-ASTiPS4F_5-Oct4 | Zhang Lab | 80+7 | 2,504,974,000 |
101016 | HL077 | S7 | AL-Exome-HUViPS4F1-Aug14-Belmonte | Zhang Lab | 80+7 | 1,664,126,000 |
101016 | HL077 | S8 | DD-DMR220K-BJiPS_Rebalanced-Sep23 | Zhang Lab | 80+7 | 1,909,981,000 |
101012 | AL009 | S1 | AG-Exome-OAT_F-Oct12 | Zhang Lab | 80 | 2,119,404,000 |
101012 | AL009 | S2 | AG-Exome-OAT_12-Oct12 | Zhang Lab | 80 | 2,093,540,000 |
101012 | AL009 | S3 | AG-Exome-OAT_12.4-Oct12 | Zhang Lab | 80 | 1,901,899,000 |
101012 | AL009 | S4 | AG-Exome-OAT_12.4.2-Oct12 | Zhang Lab | 80 | 1,948,886,000 |
101012 | AL009 | S5 | AG-Exome-B4-Oct12 | Zhang Lab | 80 | 1,846,700,000 |
101012 | AL009 | S6 | AG-Exome-1034I-Oct12 | Zhang Lab | 80 | 1,964,239,000 |
101012 | AL009 | S7 | AG-Exome-1000F-Oct12 | Zhang Lab | 80 | 1,940,870,000 |
101012 | AL009 | S8 | AG-Exome-1000I-Oct12 | Zhang Lab | 80 | 2,028,039,000 |
101008 | DD003 | S1 | AG-Exome-OAT_F-Oct12 | Zhang Lab | 80 | 1,219,289,000 |
101008 | DD003 | S2 | AG-Exome-OAT_12-Oct12 | Zhang Lab | 80 | 1,620,779,000 |
101008 | DD003 | S3 | AG-Exome-OAT_12.4-Oct12 | Zhang Lab | 80 | 1,526,898,000 |
101008 | DD003 | S4 | AG-Exome-OAT_12.4.2-Oct12 | Zhang Lab | 80 | 1,713,981,000 |
101008 | DD003 | S5 | AG-Exome-B4-Oct12 | Zhang Lab | 80 | 1,546,025,000 |
101008 | DD003 | S6 | AG-Exome-1034I-Oct12 | Zhang Lab | 80 | 1,546,654,000 |
101008 | DD003 | S7 | AG-Exome-1000F-Oct12 | Zhang Lab | 80 | 1,634,594,000 |
101008 | DD003 | S8 | AG-Exome-1000I-Oct12 | Zhang Lab | 80 | 2,013,521,000 |
101006 | HL075 | S1 | HMS-C2U-12Plex-Sep29 | Zhang Lab | 36+6 | 849,634,000 |
101006 | HL075 | S2 | HMS-C2U-12Plex-Sep29 | Zhang Lab | 36+6 | 877,326,000 |
101006 | HL075 | S3 | HMS-C2U-12Plex-Sep29 | Zhang Lab | 36+6 | 881,302,000 |
101006 | HL075 | S4 | HMS-C2U-12Plex-Sep29 | Zhang Lab | 36+6 | 866,372,000 |
101006 | HL075 | S5 | HMS-C2U-12Plex-Sep29 | Zhang Lab | 36+6 | 845,377,000 |
101006 | HL075 | S6 | HMS-C2U-12Plex-Sep29 | Zhang Lab | 36+6 | 825,983,000 |
101006 | HL075 | S7 | HMS-C2U-12Plex-Sep29 | Zhang Lab | 36+6 | 865,950,000 |
101006 | HL076 | S8 | HMS-C2U-12Plex-Sep29 | Zhang Lab | 36+6 | 849,742,000 |
100925 | HL075 | S1 | KZ-Lancelet_3_Lib-Sep10 | Zhang Lab | 80+80+7 | 1,391,455,000 |
100925 | HL075 | S2 | KZ-Lancelet_3_Lib-Sep10 | Zhang Lab | 80+80+7 | 1,483,815,000 |
100925 | HL075 | S3 | KZ-Lancelet_3_Lib-Sep10 | Zhang Lab | 80+80+7 | 1,433,906,000 |
100925 | HL075 | S4 | KZ-Lancelet_3_Lib-Sep10 | Zhang Lab | 80+80+7 | 1,163,263,000 |
100925 | HL075 | S5 | KZ-Lancelet_6_Lib-Se10 | Zhang Lab | 80+80+7 | 1,951,079,000 |
100925 | HL075 | S6 | KZ-Lancelet_6_Lib-Se10 | Zhang Lab | 80+80+7 | 2,373,404,000 |
100925 | HL075 | S7 | DD-BSPP-DMR220K_N2_VarInd1_10-Sep23+10% PhiX | Zhang Lab | 80+80+7 | 2,057,108,000 |
100925 | HL075 | S8 | DD-BSPP-DMR220K_N2_SergioInd1_12-Sep23 | Zhang Lab | 80+80+7 | 2,212,734,000 |
100921 | HL074 | S1 | AL-Exome-iPS16-1-Sep17 | Zhang Lab | 80 | 1,472,681,000 |
100921 | HL074 | S2 | Al-Exome-iPS16-4-Sep17 | Zhang Lab | 80 | 1,495,036,000 |
100921 | HL074 | S3 | AL-Exome-PGP1.2_iPS#2_P38-Sep17 | Zhang Lab | 80 | 1,867,962,000 |
100921 | HL074 | S4 | AL-Exome-dH1_cf16-Sep17 | Zhang Lab | 80 | 1,456,431,000 |
100921 | HL074 | S5 | AL-Exome-NiPS2F-Aug14-Belmonte | Zhang Lab | 80 | 1,062,524,000 |
100921 | HL074 | S6 | AL-Exome-HUViPS4F3-Aug14-Belmonte | Zhang Lab | 80 | 1,174,766,000 |
100921 | HL074 | S7 | AL-Exome-HUViPS4F1-Aug14-Belmonte | Zhang Lab | 80 | 609,446,000 |
100921 | HL074 | S8 | AL-Exome-Huvec-Aug14-Belmonte | Zhang Lab | 80 | 1,276,503,000 |
100917 | HL073 | S1 | AL-Exome-iPS16-1-Sep17 | Zhang Lab | 80 | 742,023,000 |
100917 | HL073 | S2 | AL-Exome-iPS16-1-Sep17 | Zhang Lab | 80 | 789,931,000 |
100917 | HL073 | S3 | Al-Exome-iPS16-4-Sep17 | Zhang Lab | 80 | 850,349,000 |
100917 | HL073 | S4 | Al-Exome-iPS16-4-Sep17 | Zhang Lab | 80 | 855,557,000 |
100917 | HL073 | S5 | AL-Exome-PGP1.2_iPS#2_P38-Sep17 | Zhang Lab | 80 | 831,524,000 |
100917 | HL073 | S6 | AL-Exome-PGP1.2_iPS#2_P38-Sep17 | Zhang Lab | 80 | 726,195,000 |
100917 | HL073 | S7 | AL-Exome-dH1_cf16-Sep17 | Zhang Lab | 80 | 707,288,000 |
100917 | HL073 | S8 | AL-Exome-dH1_cf16-Sep17 | Zhang Lab | 80 | 755,538,000 |
100813 | HL072 | S1 | KZ-GM20431 HSCHR LIB-Sep10 | Zhang Lab | 60+7 | 651,630,000 |
100813 | HL072 | S2 | KZ-GM20431 HSCHR LIB-Sep10 | Zhang Lab | 60+7 | 694,169,000 |
100813 | HL072 | S3 | KZ-Lancelet_3_Lib-Sep10 | Zhang Lab | 60+7 | 658,430,000 |
100813 | HL072 | S4 | KZ-Lancelet_3_Lib-Sep10 | Zhang Lab | 60+7 | 646,324,000 |
100813 | HL072 | S5 | KZ-Lancelet_6_Lib-Se10 | Zhang Lab | 60+7 | 700,011,000 |
100813 | HL072 | S6 | KZ-Lancelet_6_Lib-Se10 | Zhang Lab | 60+7 | 709,104,000 |
100813 | HL072 | S7 | KZ-Lancelet_8_Lib-Sep10 | Zhang Lab | 60+7 | 0 |
100813 | HL072 | S8 | KZ-Lancelet_8_Lib-Sep10 | Zhang Lab | 60+7 | 0 |
100824 | HL071 | S1 | HMS-GC-Exome-Exome_pair_3_C-Aug13 | Zhang Lab | 60+7 | 1,239,473,000 |
100824 | HL071 | S2 | AL-Exome-HUViPS4F3-Aug14-Belmonte | Zhang Lab | 60+7 | 1,479,578,000 |
100824 | HL071 | S3 | AL-Exome-Huvec-Aug14-Belmonte | Zhang Lab | 60+7 | 1,420,862,000 |
100824 | HL071 | S4 | AL-Exome-FiPS4F7-Aug14-Belmonte | Zhang Lab | 60+7 | 1,272,738,000 |
100824 | HL071 | S5 | HL-ASE-gDNA-Aug16 | Zhang Lab | 60+7 | 1,358,927,000 |
100824 | HL071 | S6 | HL-ASE-gDNA-Aug16 | Zhang Lab | 60+7 | 1,063,216,000 |
100824 | HL071 | S7 | HL-ASE-cDNA-Aug16 | Zhang Lab | 60+7 | 1,449,370,000 |
100824 | HL071 | S8 | HL-ASE-cDNA-Aug16 | Zhang Lab | 60+7 | 1,422,238,000 |
100818 | HL070 | S1 | AL-Exome-NiPS2F-Aug14-Belmonte | Zhang Lab | 80 | 1,725,932,000 |
100818 | HL070 | S2 | AL-Exome-HUViPS4F3-Aug14-Belmonte | Zhang Lab | 80 | 1,429,202,000 |
100818 | HL070 | S3 | AL-Exome-HUViPS4F1-Aug14-Belmonte | Zhang Lab | 80 | 1,511,891,000 |
100818 | HL070 | S4 | AL-Exome-Huvec-Aug14-Belmonte | Zhang Lab | 80 | 1,361,743,000 |
100818 | HL070 | S5 | AL-Exome-hNSC-Aug14-Belmonte | Zhang Lab | 80 | 1,419,623,000 |
100818 | HL070 | S6 | AL-Exome-FiPS4F7-Aug14-Belmonte | Zhang Lab | 80 | 1,257,985,000 |
100818 | HL070 | S7 | HMS-GC-Exome-Exome_pair_6_A-Aug13 | Zhang Lab | 80 | 1,072,036,000 |
100818 | HL070 | S8 | HMS-GC-Exome-Exome_pair_6_C-Aug13 | Zhang Lab | 80 | 1,019,104,000 |
100814 | HL069 | S1 | HMS-GC-Exome-Exome_pair_1_A-Aug13 | Zhang Lab | 60 | 1,218,075,000 |
100814 | HL069 | S2 | HMS-GC-Exome-Exome_pair_1_C-Aug13 | Zhang Lab | 60 | 1,269,759,000 |
100814 | HL069 | S3 | HMS-GC-Exome-Exome_pair_2_A-Aug13 | Zhang Lab | 60 | 1,347,416,000 |
100814 | HL069 | S4 | HMS-GC-Exome-Exome_pair_2_C-Aug13 | Zhang Lab | 60 | 1,282,516,000 |
100814 | HL069 | S5 | HMS-GC-Exome-Exome_pair_3_A-Aug13 | Zhang Lab | 60 | 1,116,590,000 |
100814 | HL069 | S6 | HMS-GC-Exome-Exome_N6_FL-Aug13 | Zhang Lab | 60 | 1,232,492,000 |
100814 | HL069 | S7 | HMS-GC-Exome-Exome_N6_Cer-Aug13 | Zhang Lab | 60 | 1,411,421,000 |
100814 | HL069 | S8 | KZ-B.Jap-1_300bp_Lib-Aug5 | Zhang Lab | 60 | 0 |
100807 | HL068 | S1 | AL-Genome-CVF-Jul30 | Zhang Lab | 60+7 | 1,212,756,000 |
100807 | HL068 | S2 | AL-Genome-PGP1ips-Jul30 | Zhang Lab | 60+7 | 1,755,545,000 |
100807 | HL068 | S3 | AL-Genome-CVIB-Jul30 | Zhang Lab | 60+7 | 1,301,693,000 |
100807 | HL068 | S4 | DD-BSPP-CpG97K-13066B09-B28 | Zhang Lab | 60+7 | 1,185,514,000 |
100807 | HL068 | S5 | KZ-ASE-DNA-Jul22 | Zhang Lab | 60+7 | 875,399,000 |
100807 | HL068 | S6 | KZ-ASE-DNA-Jul22 | Zhang Lab | 60+7 | 824,990,000 |
100807 | HL068 | S7 | HL-ASE-cDNA-Jul26 | Zhang Lab | 60+7 | 1,260,545,000 |
100807 | HL068 | S8 | HL-ASE-cDNA-Jul26 | Zhang Lab | 60+7 | 1,340,234,000 |
100802 | HL067 | S1 | KZ-ASE-DNA-Jul22 | Zhang Lab | 40 | 0 |
100802 | HL067 | S2 | HL-ASE-cDNA-Jul26 | Zhang Lab | 40 | 0 |
100802 | HL067 | S3 | HC-MDA-Ecoli_90m_C-Jul30 | Zhang Lab | 40 | 920,399,000 |
100802 | HL067 | S4 | HC-MDA-Ecoli_10hr_C-Jul30 | Zhang Lab | 40 | 912,392,000 |
100802 | HL067 | S5 | AL-Exome-CV13-Jul25 | Zhang Lab | 40 | 1,183,539,000 |
100802 | HL067 | S6 | AL-Genome-PGP1F-Jul30 | Zhang Lab | 40 | 1,038,403,000 |
AL-Genome-17L_ANK-Jul30 | ||||||
100802 | HL067 | S7 | AL-Genome-17L_HK1-Jul30 | Zhang Lab | 40 | 699,527,000 |
AL-Genome-17L_SLN-Jul30 | ||||||
PhiX | ||||||
100802 | HL067 | S8 | AL-Genome-PGP1F-Jul30 | Zhang Lab | 40 | 1,062,689,000 |
100726 | HL066 | S1 | AL-Exome-CV11-Jul25 | Zhang Lab | 80 | 1,809,265,000 |
100726 | HL066 | S2 | AL-Exome-CV11-Jul25 | Zhang Lab | 80 | 1,932,617,000 |
100726 | HL066 | S3 | Al-Exome-CV12-Jul25 | Zhang Lab | 80 | 1,867,404,000 |
100726 | HL066 | S4 | Al-Exome-CV12-Jul25 | Zhang Lab | 80 | 987,605,000 |
100726 | HL066 | S5 | AL-Exome-CV13-Jul25 | Zhang Lab | 80 | 303,021,000 |
100726 | HL066 | S6 | AL-Exome-CV13-Jul25 | Zhang Lab | 80 | 604,097,000 |
100726 | HL066 | S7 | AL-Exome-56JW-Jul25-Vanderbilt | Zhang Lab | 80 | 616,688,000 |
100726 | HL066 | S8 | AL-Exome-56JW-Jul25-Vanderbilt | Zhang Lab | 80 | 1,754,710,000 |
100721 | HL065 | S1 | AL-Exome-CF_1.4-Jul10-Daley5 | Zhang Lab | 80 | 1,456,489,000 |
100721 | HL065 | S2 | DD-BSPP-CpG97K-05215B09-Mar18-B10 | Zhang Lab | 80 | 1,493,011,000 |
100721 | HL065 | S3 | AL-Exome-FiPS_3F1-Jul20 | Zhang Lab | 80 | 1,695,531,000 |
100721 | HL065 | S4 | AL-Exome-FiPS_3F1-Jul20 | Zhang Lab | 80 | 1,701,866,000 |
100721 | HL065 | S5 | AL-Exome-HFFXF-Jul20 | Zhang Lab | 80 | 1,729,276,000 |
100721 | HL065 | S6 | AL-Exome-HFFXF-Jul20 | Zhang Lab | 80 | 1,602,218,000 |
100721 | HL065 | S7 | AL-Exome-KiPS_4F8-Jul20 | Zhang Lab | 80 | 1,592,717,000 |
100721 | HL065 | S8 | AL-Exome-KiPS_4F8-Jul20 | Zhang Lab | 80 | 1,688,181,000 |
100717 | HL064 | S1 | KZ-BSPP_DMR220K-BJiPS-Jul10 | Zhang Lab | 80 | 1,542,764,000 |
100717 | HL064 | S2 | AL-Exome-dHiF-Jun25-Daley1 | Zhang Lab | 80 | 1,488,881,000 |
100717 | HL064 | S3 | DD-BSPP-PGP1iPS_Jun22-CPG97K+30K | Zhang Lab | 80 | 1,462,284,000 |
100717 | HL064 | S4 | DD-BSPP_CPG97K-PGP1Fib-Jul16 | Zhang Lab | 80 | 1,189,205,000 |
100717 | HL064 | S5 | DD-BSPP_CPG97K-01192B09-Jul14-B1 | Zhang Lab | 80 | 1,361,170,000 |
100717 | HL064 | S6 | DD-BSPP_CPG97K-01373A17-Jul14-B3 | Zhang Lab | 80 | 1,420,433,000 |
100717 | HL064 | S7 | DD-BSPP_CPG97K-01373B09-Jul14-B4 | Zhang Lab | 80 | 1,352,159,000 |
100717 | HL064 | S8 | DD-BSPP_CPG97K-07292B9-Jul16-BC14 | Zhang Lab | 80 | 1,489,737,000 |
100713 | HL063 | S1 | AL-Exome-CF_Fib-Jul10-Daley4 | Zhang Lab | 80 | 1,588,122,000 |
100713 | HL063 | S2 | AL-Exome-CF_Fib-Jul10-Daley4 | Zhang Lab | 80 | 1,616,900,000 |
100713 | HL063 | S3 | AL-Exome-CF_1.4-Jul10-Daley5 | Zhang Lab | 80 | 1,644,859,000 |
100713 | HL063 | S4 | AL-Exome-CF_1.4-Jul10-Daley5 | Zhang Lab | 80 | 1,632,408,000 |
100713 | HL063 | S5 | AL-Exome-CF_1.9-Jul10-Daley6 | Zhang Lab | 80 | 1,569,908,000 |
100713 | HL063 | S6 | AL-Exome-CF_1.9-Jul10-Daley6 | Zhang Lab | 80 | 1,573,677,000 |
100713 | HL063 | S7 | AL-Exome-H1_P39-Jul10-Daley7 | Zhang Lab | 80 | 1,582,703,000 |
100713 | HL063 | S8 | AL-Exome-H1_P39-Jul10-Daley7 | Zhang Lab | 80 | 1,559,342,000 |
AL-DigiQ-PGP1F_L-Jun14 | ||||||
100707 | HL062 | S1 | AL-DigiQ-CVF_L-Jun14 | Zhang Lab | 40 | 495,632,000 |
PhiX | ||||||
AL-DigiQ-PGP1ips-Jun14 | ||||||
100707 | HL062 | S2 | AL-DigiQ-CViB-Jun14 | Zhang Lab | 40 | 557,121,000 |
PhiX | ||||||
AL-DigiQ-PGP1F-Jun14 | Zhang Lab | |||||
100707 | HL062 | S3 | AL-DigiQ-CVF-Jun14 | Zhang Lab | 40 | 513,397,000 |
PhiX | Zhang Lab | |||||
100707 | HL062 | S4 | AL-DigiQ-Clean-Jul6-PhiX-11_17_29 | Zhang Lab | 40 | 719,292,000 |
100707 | HL062 | S5 | AL-DigiQ-Fib-Jul6-PhiX-11_17_29 | Zhang Lab | 40 | 718,808,000 |
100707 | HL062 | S6 | AL-DigiQ-Mutation-Jul6-PhiX-11_17_29 | Zhang Lab | 40 | 740,698,000 |
100707 | HL062 | S7 | JG-Microbiome-Ecoli1-July2 | Zhang Lab | 40 | 821,436,000 |
100707 | HL062 | S8 | PhiX | Zhang Lab | 40 | 604,827,000 |
100703 | HL061_3 | S1 | AL-Exome-DF19.11b-Jul22-Thompson1 | Zhang Lab | 80 | 1,574,935 |
100703 | HL061_3 | S2 | AL-Exome-DF19.11b-Jul22-Thompson1 | Zhang Lab | 80 | 1,638,913 |
100703 | HL061_3 | S3 | AL-Exome-ips4.7-Jul22-Thompson2 | Zhang Lab | 80 | 1,576,439 |
100703 | HL061_3 | S4 | AL-Exome-ips4.7-Jul22-Thompson2 | Zhang Lab | 80 | 1,556,867 |
100703 | HL061_3 | S5 | Al-Exome-ips_dHiF8-Jun25-Daley2 | Zhang Lab | 80 | 1,944,840 |
100703 | HL061_3 | S6 | AL-Exome-ips_dHiF9-Jun25-Daley3 | Zhang Lab | 80 | 1,990,985 |
100703 | HL061_3 | S7 | DD-BSPP-HGPS72iPS_Jul2-CPG97K+30K | Zhang Lab | 80 | 776,501 |
100703 | HL061_3 | S8 | DD-BSPP-BJiPS_Jul2-CPG97K+30K | Zhang Lab | 80 | 795,092 |
100701 | HL061_2 | S1 | AL-Exome-DF19.11b-Jun22-Thompson1 | Zhang Lab | Failed | |
100701 | HL061_2 | S2 | AL-Exome-DF19.11b-Jun22-Thompson1 | Zhang Lab | Failed | |
100701 | HL061_2 | S3 | AL-Exome-ips4.7-Jun22-Thompson2 | Zhang Lab | Failed | |
100701 | HL061_2 | S4 | AL-Exome-ips4.7-Jun22-Thompson2 | Zhang Lab | Failed | |
100701 | HL061_2 | S5 | Al-Exome-ips_dHiF8-Jun25-Daley2 | Zhang Lab | Failed | |
100701 | HL061_2 | S6 | AL-Exome-ips_dHiF9-Jun25-Daley3 | Zhang Lab | Failed | |
100701 | HL061_2 | S7 | DD-BSPP-HGPS72iPS_Jun22-CPG97K+30K | Zhang Lab | Failed | |
100701 | HL061_2 | S8 | DD-BSPP-BJiPS_Jun22-CPG97K+30K | Zhang Lab | Failed | |
Jan-Jun
Date | Run | Lane | Tube Label | Seq facility | Read length | # filtered reads (bps) |
100630 | HL061 | S1 | AL-Exome-DF19.11b-Jun22-Thompson1 | Zhang Lab | Failed | |
100630 | HL061 | S2 | AL-Exome-DF19.11b-Jun22-Thompson1 | Zhang Lab | Failed | |
100630 | HL061 | S3 | AL-Exome-ips4.7-Jun22-Thompson2 | Zhang Lab | Failed | |
100630 | HL061 | S4 | AL-Exome-ips4.7-Jun22-Thompson2 | Zhang Lab | Failed | |
100630 | HL061 | S5 | Al-Exome-ips_dHiF8-Jun25-Daley2 | Zhang Lab | Failed | |
100630 | HL061 | S6 | AL-Exome-ips_dHiF9-Jun25-Daley3 | Zhang Lab | Failed | |
100630 | HL061 | S7 | DD-BSPP-HGPS72iPS_Jun22-CPG97K+30K | Zhang Lab | Failed | |
100630 | HL061 | S8 | DD-BSPP-BJiPS_Jun22-CPG97K+30K | Zhang Lab | Failed | |
100627 | HL060 | S1 | AL-Exome-dHiF-Jun25-Daley1 | Zhang Lab | 80 | N/A |
100627 | HL060 | S2 | AL-Exome-dHiF-Jun25-Daley1 | Zhang Lab | 80 | N/A |
100627 | HL060 | S3 | AL-Exome-DF19.11b-Jun22-Thompson1 | Zhang Lab | 80 | N/A |
100627 | HL060 | S4 | Al-Exome-ips_dHiF8-Jun25-Daley2 | Zhang Lab | 80 | N/A |
100627 | HL060 | S5 | Al-Exome-ips_dHiF8-Jun25-Daley2 | Zhang Lab | 80 | N/A |
100627 | HL060 | S6 | AL-Exome-ips_dHiF9-Jun25-Daley3 | Zhang Lab | 80 | N/A |
100627 | HL060 | S7 | AL-Exome-ips_dHiF9-Jun25-Daley3 | Zhang Lab | 80 | N/A |
100627 | HL060 | S8 | PhiX Control | Zhang Lab | 80 | N/A |
100623 | HL059 | S1 | AL-Exome-DF19.11b-Jun22-Thompson1 | Zhang Lab | N/A | Low Cluster Density |
100623 | HL059 | S2 | AL-Exome-DF19.11b-Jun22-Thompson1 | Zhang Lab | N/A | Low Cluster Density |
100623 | HL059 | S3 | AL-Exome-ips4.7-Jun22-Thompson2 | Zhang Lab | N/A | Low Cluster Density |
100623 | HL059 | S4 | AL-Exome-ips4.7-Jun22-Thompson2 | Zhang Lab | N/A | Low Cluster Density |
100623 | HL059 | S5 | DD-BSPP-HGPS72iPS_Jun22-CPG97K+30K | Zhang Lab | N/A | Low Cluster Density |
100623 | HL059 | S6 | DD-BSPP-BJiPS_Jun22-CPG97K+30K | Zhang Lab | N/A | Low Cluster Density |
100623 | HL059 | S7 | DD-BSPP-PGP1iPS_Jun22-CPG97K+30K | Zhang Lab | N/A | Low Cluster Density |
100623 | HL059 | S8 | KZ-?-BJ_iPSDMR220K-Jun8 | Zhang Lab | N/A | Low Cluster Density |
100615 | HL058_2 | S1 | AL-Exome-ips 11b-Eggan-Mar9 | Zhang Lab | 60 | |
100615 | HL058_2 | AL-DigiQ-PGP1F_L-Jun14 | ||||
100615 | HL058_2 | S2 | AL-DigiQ-CVF_L-Jun14 | Zhang Lab | 60 | Low Cluster Density |
100615 | HL058_2 | PhiX | ||||
100615 | HL058_2 | S3 | AL-exome-hFib 17-Eggan-Mar9 | Zhang Lab | 60 | |
100615 | HL058_2 | AL-DigiQ-PGP1ips-Jun14 | ||||
100615 | HL058_2 | S4 | AL-DigiQ-CViB-Jun14 | Zhang Lab | 60 | Low Cluster Density |
100615 | HL058_2 | PhiX | ||||
100615 | HL058_2 | S5 | AL-Exome-hFib29-Eggan-Mar9 | Zhang Lab | 60 | |
100615 | HL058_2 | S6 | AL-Exome-29A_Eggan-Mar17 | Zhang Lab | 60 | |
100615 | HL058_2 | AL-DigiQ-PGP1F-Jun14 | ||||
100615 | HL058_2 | S7 | AL-DigiQ-CVF-Jun14 | Zhang Lab | 60 | Low Cluster Density |
100615 | HL058_2 | PhiX | ||||
100615 | HL058_2 | S8 | AL-Exome-ips 29e-Eggan-Mar9 | Zhang Lab | 60 | |
100612 | HL058 | S1 | AL-Exome-ips 11b-Eggan-Mar9 | Zhang Lab | ||
AL-DigiQ-PGP1F_L-Jun11 | ||||||
100612 | HL058 | S2 | AL-DigiQ-CVF_L-Jun11 | Zhang Lab | Low Cluster Density | |
PhiX | ||||||
100612 | HL058 | S3 | AL-exome-hFib 17-Eggan-Mar9 | Zhang Lab | ||
AL-DigiQ-PGP1ips-Jun11 | ||||||
100612 | HL058 | S4 | AL-DigiQ-CViB-Jun11 | Zhang Lab | Low Cluster Density | |
PhiX | ||||||
100612 | HL058 | S5 | AL-Exome-hFib29-Eggan-Mar9 | Zhang Lab | ||
100612 | HL058 | S6 | AL-Exome-29A_Eggan-Mar17 | Zhang Lab | ||
AL-DigiQ-PGP1F-Jun11 | ||||||
100612 | HL058 | S7 | AL-DigiQ-CVF-Jun11 | Zhang Lab | Low Cluster Density | |
PhiX | ||||||
100612 | HL058 | S8 | AL-Exome-ips 29e-Eggan-Mar9 | Zhang Lab | ||
100606 | VCU | S1 | AL-Exome-134GA-May3-Vanderbilt | VCU | 80 | |
100606 | VCU | S2 | AL-Exome-134GA-May3-Vanderbilt | VCU | 80 | |
100606 | VCU | S3 | AL-Exome-134LM-May3-Vanderbilt | VCU | 80 | |
100606 | VCU | S4 | AL-Exome-134LM-May3-Vanderbilt | VCU | 80 | |
100606 | VCU | S5 | Al-Exome-121DB-May3-Vanderbilt | VCU | 80 | |
100606 | VCU | S6 | Al-Exome-121DB-May3-Vanderbilt | VCU | 80 | |
100606 | VCU | S7 | AL-Exome-56JW-May3-Vanderbilt | VCU | 80 | |
100606 | VCU | S8 | AL-Exome-56JW-May3-Vanderbilt | VCU | 80 | |
100605 | HL057 | S1 | VCU-Gao-GY2-May25 | Zhang Lab | 60 | |
100605 | HL057 | S2 | VCU-Gao-GY3-May25 | Zhang Lab | 60 | |
100605 | HL057 | S3 | VCU-Gao-GY4-May25 | Zhang Lab | 60 | |
100605 | HL057 | S4 | VCU-Gao-GY5-May25 | Zhang Lab | 60 | |
100605 | HL057 | S5 | VCU-Gao-GY6-May25 | Zhang Lab | 60 | |
100605 | HL057 | S6 | VCU-Gao-GY7-May25 | Zhang Lab | 60 | |
100605 | HL057 | S7 | VCU-Gao-GY8-May25 | Zhang Lab | 60 | |
100605 | HL057 | S8 | PhiX | Zhang Lab | 60 | |
100601 | HL056 | S1 | Al-Exome-121BP-May3-Vanderbilt | Zhang Lab | 80 | 2,295,676,000 |
100601 | HL056 | S2 | Al-Exome-139TS-May3-Vanderbilt | Zhang Lab | 80 | 2,389,689,000 |
100601 | HL056 | S3 | AL-Exome-56JW-May3-Vanderbilt | Zhang Lab | 80 | 2,003,056,000 |
100601 | HL056 | S4 | Al-Exome-121DB-May3-Vanderbilt | Zhang Lab | 80 | 2,294,729,000 |
100601 | HL056 | S5 | Al-Exome-56WW-May3-Vanderbilt | Zhang Lab | 80 | 2,028,859,000 |
100601 | HL056 | S6 | AL-Exome-139TD-May3-Vanderbilt | Zhang Lab | 80 | 1,991,602,000 |
100601 | HL056 | S7 | AL-Exome-125GA-May3-Vanderbilt | Zhang Lab | 80 | 2,138,804,000 |
100601 | HL056 | S8 | Al-Exome-125DC-May3-Vanderbilt | Zhang Lab | 80 | 2,014,180,000 |
100523 | HL055 | S1 | Al-Exome-121BP-May3-Vanderbilt | Zhang Lab | 80X2 | 2,064,140,000 |
100523 | HL055 | S2 | Al-Exome-139TS-May3-Vanderbilt | Zhang Lab | 80X2 | 2,146,818,000 |
100523 | HL055 | S3 | AL-Exome-56JW-May3-Vanderbilt | Zhang Lab | 80X2 | 1,757,982,000 |
100523 | HL055 | S4 | Al-Exome-121DB-May3-Vanderbilt | Zhang Lab | 80X2 | 2,009,833,000 |
100523 | HL055 | S5 | Al-Exome-56WW-May3-Vanderbilt | Zhang Lab | 80X2 | 1,965,460,000 |
100523 | HL055 | S6 | AL-Exome-139TD-May3-Vanderbilt | Zhang Lab | 80X2 | 1,957,803,000 |
100523 | HL055 | S7 | AL-Exome-125GA-May3-Vanderbilt | Zhang Lab | 80X2 | 1,977,461,000 |
100523 | HL055 | S8 | Al-Exome-125DC-May3-Vanderbilt | Zhang Lab | 80X2 | 1,896,028,000 |
100514 | HL054 | S1 | Al-Exome-121BP-May3-Vanderbilt | Zhang Lab | 80X2 | 2,055,502,000 |
100514 | HL054 | S2 | Al-Exome-139TS-May3-Vanderbilt | Zhang Lab | 80X2 | 2,109,831,000 |
100514 | HL054 | S3 | AL-Exome-134GA-May3-Vanderbilt | Zhang Lab | 80X2 | 2,115,594,000 |
100514 | HL054 | S4 | AL-Exome-134LM-May3-Vanderbilt | Zhang Lab | 80X2 | 2,145,899,000 |
100514 | HL054 | S5 | Al-Exome-56WW-May3-Vanderbilt | Zhang Lab | 80X2 | 2,071,626,000 |
100514 | HL054 | S6 | AL-Exome-139TD-May3-Vanderbilt | Zhang Lab | 80X2 | 1,959,635,000 |
100514 | HL054 | S7 | AL-Exome-125GA-May3-Vanderbilt | Zhang Lab | 80X2 | 1,985,925,000 |
100514 | HL054 | S8 | Al-Exome-125DC-May3-Vanderbilt | Zhang Lab | 80X2 | 1,973,832,000 |
100503 | HL053 | S1 | AL-Exome-CViB-Apr23 | Zhang Lab | 80X2 | 1,948,897,000 |
100503 | HL053 | S2 | AL-Exome-CViF-Apr25 | Zhang Lab | 80X2 | 2,076,896,000 |
100503 | HL053 | S3 | AL-Exome-DF-Apr23 | Zhang Lab | 80X2 | 2,335,032,000 |
100503 | HL053 | S4 | AL-Exome-FS-Apr23 | Zhang Lab | 80X2 | 2,433,140,000 |
100503 | HL053 | S5 | AL-Exome-hFib11-apr23 | Zhang Lab | 80X2 | 2,083,124,000 |
100503 | HL053 | S6 | HC-MDA_Mouse_2h_c4-Mar02 | Zhang Lab | 80X2 | 1,223,678,000 |
100503 | HL053 | S7 | AL-Exome-ips17a-Apr23 | Zhang Lab | 80X2 | 1,453,812,000 |
100503 | HL053 | S8 | AL-Exome-ips17b-Apr23 | Zhang Lab | 80X2 | 1,949,271,000 |
100429 | HL052 | S1 | PhiX | Zhang Lab | 18X2 | 64,904,000 |
100429 | HL052 | S2 | PhiX | Zhang Lab | 18X2 | 81,369,000 |
100429 | HL052 | S3 | PhiX | Zhang Lab | 18X2 | 79,289,000 |
100429 | HL052 | S4 | PhiX | Zhang Lab | 18X2 | 76,562,000 |
100429 | HL052 | S5 | PhiX | Zhang Lab | 18X2 | 72,647,000 |
100429 | HL052 | S6 | PhiX | Zhang Lab | 18X2 | 73,558,000 |
100429 | HL052 | S7 | PhiX | Zhang Lab | 18X2 | 72,909,000 |
100429 | HL052 | S8 | PhiX | Zhang Lab | 18X2 | 71,652,000 |
100425 | DD002 | S1 | AL-Exome-CV1-Apr22-Nimblegen | Zhang Lab | 80 | 1,985,894,000 |
100425 | DD002 | S2 | JD-BSPP-Cmm09A-Oct4GFPiPs-Apr8-iPS | Zhang Lab | 80 | 1,395,971,000 |
100425 | DD002 | S3 | JD-BSPP-Cmm09A-mousePGC-Apr8-PGC | Zhang Lab | 80 | 1,740,602,000 |
100425 | DD002 | S4 | AL-Exome-CV1-Apr22-Nimbegen | Zhang Lab | 80 | 1,872,065,000 |
100425 | DD002 | S5 | DD-BSPP-CpG97K-AG01972p18-Apr22-A1 | Zhang Lab | 80 | 1,314,109,000 |
100425 | DD002 | S6 | DD-BSPP-CpG97K-AG114p8p13-Apr22-A2 | Zhang Lab | 80 | 1,226,682,000 |
100425 | DD002 | S7 | DD-BSPP-CpG97K-H9-Apr22 | Zhang Lab | 80 | 1,113,533,000 |
100425 | DD002 | S8 | DD-BSPP-CpG97K-BJp13-Apr22-BJ | Zhang Lab | 80 | 1,289,198,000 |
100420 | HL051 | S1 | Zymo-M1-Apr16 | Zhang Lab | 40 | 457,916,000 |
100420 | HL051 | S2 | Zymo-M2-Apr16 | Zhang Lab | 40 | 436,172,000 |
100420 | HL051 | S3 | Zymo-M3-Apr16 | Zhang Lab | 40 | 354,544,000 |
100420 | HL051 | S4 | Zymo-M4-Apr16 | Zhang Lab | 40 | 212,326,000 |
100420 | HL051 | S5 | Zymo-H1-Apr16 | Zhang Lab | 40 | 558,978,000 |
100420 | HL051 | S6 | Zymo-H2-Apr16 | Zhang Lab | 40 | 520,089,000 |
HC-MDA_E.Coli_10h_5-Apr19 | ||||||
100420 | HL051 | S7 | HC-MDA_E.Coli_10h_6-Apr19 | Zhang Lab | 40 | 175,344,000 |
PhiX | ||||||
100420 | HL051 | S8 | HC-MDA_Mouse_2h_c4-Mar02 | Zhang Lab | 40 | 124,140,000 |
100415 | HL050 | S1 | AL-Exome-ips 11a-Eggan-Mar9 | Zhang Lab | 80 | 1,228,095,000 |
100415 | HL050 | S2 | AL-Exome-CV2- Apr12-Nimblegen | Zhang Lab | 80 | 1,949,162,000 |
100415 | HL050 | S3 | AL-Exome-CV2- Apr12-Nimblegen | Zhang Lab | 80 | 1,783,540,000 |
100415 | HL050 | S4 | AL-Exome-ips 11a-Eggan-Mar9 | Zhang Lab | 80 | 1,152,158,000 |
100415 | HL050 | S5 | AL-Exome-CV3-Apr12-Nimblegen | Zhang Lab | 80 | 1,617,660,000 |
100415 | HL050 | S6 | AL-Exome-CV3-Apr12-Nimblegen | Zhang Lab | 80 | 1,554,899,000 |
100415 | HL050 | S7 | Al-Exome-CV4-Apr12-Nimblegen | Zhang Lab | 80 | 1,975,782,000 |
100415 | HL050 | S8 | Al-Exome-CV4-Apr12-Nimblegen | Zhang Lab | 80 | 1,871,429,000 |
100411 | HL049_2 | S1 | AL-exome-ips 11b-Eggan-Mar9 | Zhang Lab | 80 | 710,636,000 |
100411 | HL049_2 | S2 | AL-Exome-PGP1F-Mar9-Agilent_Cell_Pellete | Zhang Lab | 80 | 1,873,431,000 |
100411 | HL049_2 | S3 | AL-Exome-PGP1F-Mar9-Agilent_Cell_Pellete | Zhang Lab | 80 | 1,631,006,000 |
100411 | HL049_2 | S4 | AL-exome-hFib 17-Eggan-Mar9 | Zhang Lab | 80 | 2,120,734,000 |
100411 | HL049_2 | S5 | AL-Exome-ips 11a-Eggan-Mar9 | Zhang Lab | 80 | 608,718,000 |
100411 | HL049_2 | S6 | AL-Exome-ips 11a-Eggan-Mar9 | Zhang Lab | 80 | 10,092,000 |
100411 | HL049_2 | S7 | AL-Exome-ips 29e-Eggan-Mar9 | Zhang Lab | 80 | 509,138,000 |
100411 | HL049_2 | S8 | AL-Exome-ips 29e-Eggan-Mar9 | Zhang Lab | 80 | 1,160,777,000 |
100407 | DD001 | S1 | HMS-GC-Exome-PGP3 | Zhang Lab | 60 | 633,169,000 |
100407 | DD001 | S2 | MCG-HS-EJ645-Feb26 | Zhang Lab | 60 | 1,214,095,000 |
100407 | DD001 | S3 | MCG-HS-EJ656-Feb26 | Zhang Lab | 60 | 321,550,000 |
100407 | DD001 | S4 | HMS-GC-Exome-PGP10 | Zhang Lab | 60 | 1,294,949,000 |
100407 | DD001 | S5 | DD-BSPP-CpG97K-05215A18-Mar18-B9 | Zhang Lab | 60 | 956,968,000 |
100407 | DD001 | S6 | DD-BSPP-CpG97K-05215B09-Mar18-B10 | Zhang Lab | 60 | 259,485,000 |
100407 | DD001 | S7 | DD-BSPP-CpG97K-09351B09-Mar18-B22 | Zhang Lab | 60 | 856,623,000 |
100407 | DD001 | S8 | DD-BSPP-CpG97K-13066B09-Mar18-B28 | Zhang Lab | 60 | 229,124,000 |
100401 | HL048 | S1 | AL-Exome-PGP1_iPS_P16-Mar23-Nimblegen | Zhang Lab | 80 | 2,175,052,000 |
100401 | HL048 | S2 | AL-Exome-PGP1_iPS_P16-Mar23-Nimblegen | Zhang Lab | 80 | 2,424,503,000 |
100401 | HL048 | S3 | AL-Exome-PGP1F-Mar23-Nimblegen | Zhang Lab | 80 | 1,872,156,000 |
100401 | HL048 | S4 | AL-Exome-PGP1F-Mar23-Nimblegen | Zhang Lab | 80 | 1,756,170,000 |
100401 | HL048 | S5 | AL-Exome-hFib29-Eggan-Mar9 | Zhang Lab | 80 | 2,288,271,000 |
100401 | HL048 | S6 | AL-Exome-hFib29-Eggan-Mar9 | Zhang Lab | 80 | 2,100,116,000 |
100401 | HL048 | S7 | AL-Exome-29A_Eggan-Mar17 | Zhang Lab | 80 | 2,132,208,000 |
100401 | HL048 | S8 | AL-Exome-29A_Eggan-Mar17 | Zhang Lab | 80 | 1,980,027,000 |
100326 | HL047 | S1 | AL-Exome-CViB-Mar23-Nimblegen | Zhang Lab | 80 | 2,064,171,000 |
100326 | HL047 | S2 | AL-Exome-CViB-Mar23-Nimblegen | Zhang Lab | 80 | 2,013,502,000 |
100326 | HL047 | S3 | HMS-GC-Exome-PGP9-Feb24 | Zhang Lab | 80 | 2,298,166,000 |
100326 | HL047 | S4 | HMS-GC-Exome-PGP2 | Zhang Lab | 80 | 2,627,795,000 |
100326 | HL047 | S5 | HMS-GC-Exome-PGP3 | Zhang Lab | 80 | 716,842,000 |
100326 | HL047 | S6 | HMS-GC-Exome-PGP3 | Zhang Lab | 80 | 722,736,000 |
100326 | HL047 | S7 | AL-Exome-CVF-Mar23-Nimblegen | Zhang Lab | 80 | 2,368,574,000 |
100326 | HL047 | S8 | AL-Exome-CVF-Mar23-Nimblegen | Zhang Lab | 80 | 2,290,573,000 |
100318 | HL046_3 | S1 | AL-exome-hFib 17-Eggan-Mar9 | Zhang Lab | 80 | 272,118,000 |
100318 | HL046_3 | S2 | AL-exome-hFib 11-Eggan-Mar9 | Zhang Lab | 80 | 3,874,000 |
100318 | HL046_3 | S3 | AL-exome-ips 11b-Eggan-Mar9 | Zhang Lab | 80 | 62,172,000 |
100318 | HL046_3 | S4 | AL-exome-ips 17a-Eggan-Mar9 | Zhang Lab | 80 | 1,530,000 |
100318 | HL046_3 | S5 | AL-exome-ips 17b-Eggan-Mar9 | Zhang Lab | 80 | 1,418,802,000 |
100318 | HL046_3 | S6 | AL-Exome-CViB-Feb21-Agilent | Zhang Lab | 80 | 19,536,000 |
100318 | HL046_3 | S7 | AL-Exome-CViB-Feb21-Agilent | Zhang Lab | 80 | 70,512,000 |
100318 | HL046_3 | S8 | MCG-HS-EJ657-Feb26 | Zhang Lab | 80 | 1,633,297,000 |
100312 | HL045 | S1 | AL-exome-hFib 17-Eggan-Mar9 | Zhang Lab | 80 | 1,506,856,000 |
100312 | HL045 | S2 | HMS-GC-Exome-PGP2 | Zhang Lab | 80 | 2,253,160,000 |
100312 | HL045 | S3 | HMS-GC-Exome-PGP7-Feb24 | Zhang Lab | 80 | 2,238,526,000 |
100312 | HL045 | S4 | HMS-GC-Exome-PGP9-Feb24 | Zhang Lab | 80 | 2,184,078,000 |
100312 | HL045 | S5 | AL-exome-hFib 11-Eggan-Mar9 | Zhang Lab | 80 | 1,494,615,000 |
100312 | HL045 | S6 | AL-exome-ips 11b-Eggan-Mar9 | Zhang Lab | 80 | 1,517,718,000 |
100312 | HL045 | S7 | AL-exome-ips 17a-Eggan-Mar9 | Zhang Lab | 80 | 1,898,132,000 |
100312 | HL045 | S8 | AL-exome-ips 17b-Eggan-Mar9 | Zhang Lab | 80 | 1,484,276,000 |
100309 | HL044 | S1 | JD-CPG97K-BC_11306A18-Feb25-B25 | Zhang Lab | 60 | 1,195,725,000 |
100309 | HL044 | S2 | JD-CPG97K-BC_11306B09-Feb25-B26 | Zhang Lab | 60 | 1,010,595,000 |
100309 | HL044 | S3 | JD-CPG97K-BC_13066A17-Feb25-B27 | Zhang Lab | 60 | 1,282,911,000 |
100309 | HL044 | S4 | AL-Genome-FS_gDNA-Feb8 | Zhang Lab | 60 | 299,586,000 |
100309 | HL044 | S5 | JD-CPG97K+30K-BC_01373A17-Jan15-B3 | Zhang Lab | 60 | 572,821,000 |
100309 | HL044 | S6 | AL-Exome-CViB-Feb21-Agilent | Zhang Lab | 60 | 43,405,000 |
100309 | HL044 | S7 | AL-DigiQ-CVF_PhiX-Mar3-(Jan29) | Zhang Lab | 60 | 1,123,888,000 |
100309 | HL044 | S8 | KZ-DigiQ-FS_6N_PhiX-Mar3-(Jan27) | Zhang Lab | 60 | 490,072,000 |
100305 | HL043 | S1 | AL-Genome-FS_gDNA-Feb8 | Zhang Lab | 60 | 713,975,000 |
100305 | HL043 | S2 | AL-Genome-FS_gDNA-Feb8 | Zhang Lab | 60 | 580,915,000 |
100305 | HL043 | S3 | AL-DigiQ-CVF_Feb-Mar3 w/ PhiX | Zhang Lab | 60 | 1,226,356,000 |
100305 | HL043 | S4 | JD-CPG97K-BC_09351A17-Feb25 -B21 | Zhang Lab | 60 | 1,070,585,000 |
100305 | HL043 | S5 | JD-CPG97K-BC_09491A17-Feb25-B23 | Zhang Lab | 60 | 1,089,308,000 |
100305 | HL043 | S6 | JD-CPG97K-BC_09491B09-Feb25-B24 | Zhang Lab | 60 | 1,072,970,000 |
100305 | HL043 | S7 | AL-Genome-DF_gDNA-Feb8 | Zhang Lab | 60 | 1,636,622,000 |
100305 | HL043 | S8 | AL-Genome-DF_gDNA-Feb8 | Zhang Lab | 60 | 1,558,396,000 |
AL-DigiQ-CViB/iF-Jan29 | ||||||
100302 | HL042 | S1 | KZ-DigiQ-FS_300BP-Jan27 | Zhang Lab | 60 | 727,876,000 |
PhiX | ||||||
100302 | HL042 | S2 | MCG-HS-EJ644-Feb26 | Zhang Lab | 60 | 534,189,000 |
100302 | HL042 | S3 | AL-Exome-CViB-Feb21-Agilent | Zhang Lab | 60 | 535,218,000 |
100302 | HL042 | S4 | JD-cpg97k-Breastcancer_09092B09-Feb25-B16 | Zhang Lab | 60 | 688,224,000 |
100302 | HL042 | S5 | JD-cpg97k-Breastcancer_09123A17-Feb25-B17 | Zhang Lab | 60 | 988,402,000 |
100302 | HL042 | S6 | JD-cpg97k-Breastcancer_09123B09-Feb25-B18 | Zhang Lab | 60 | 1,305,870,000 |
100302 | HL042 | S7 | JD-cpg97k-Breastcancer_09206B09-Feb25-B19 | Zhang Lab | 60 | 1,139,776,000 |
100302 | HL042 | S8 | JD-cpg97k-Breastcancer_09265B09-Feb25-B20 | Zhang Lab | 60 | 1,194,327,000 |
100226 | HL041 | S1 | JD-CPG97K-BreastCancer-05359A17_R-Feb17-B11R | Zhang Lab | 60 | 1,493,888,000 |
AL-DigiQ-CViB/iF-Jan29 | ||||||
100226 | HL041 | S2 | KZ-DigiQ-FS_300BP-Jan27 | Zhang Lab | 60 | 403,356,000 |
PhiX | ||||||
100226 | HL041 | S3 | HMS-GC-Exome-PGP7-Feb24 | Zhang Lab | 60 | 1,646,149,000 |
100226 | HL041 | S4 | HMS-GC-Exome-PGP9-Feb24 | Zhang Lab | 60 | 1,439,205,000 |
100226 | HL041 | S5 | JD-CPG97K-BreastCancer-05359B09_R-Feb17-B12R | Zhang Lab | 60 | 1,453,021,000 |
100226 | HL041 | S6 | JD-CPG97K-BreastCancer_07292A17_R-Feb17-B13R | Zhang Lab | 60 | 1,678,189,000 |
100226 | HL041 | S7 | JD-CPG97K-BreastCancer_07292B09_R-Feb17-B14R | Zhang Lab | 60 | 1,463,761,000 |
AL-DigiQ-CVF-Jan29 | ||||||
100226 | HL041 | S8 | KZ-DigiQ-FS_6N-Jan27 | Zhang Lab | 60 | 1,575,744,000 |
PhiX | ||||||
100219 | HL040 | S1 | UCSD-BO-YC_RNA-Feb17 | Zhang Lab | 60 | 1,357,018,000 |
AL-DigiQ-CViB/iF-Jan29 | ||||||
100219 | HL040 | S2 | KZ-DigiQ-FS_300BP-Jan27 | Zhang Lab | 60 | 980,963,000 |
PhiX | ||||||
100219 | HL040 | S3 | JD-CPG97k+30k-Breast_cancer_01373A17-Jan15-B3 | Zhang Lab | 60 | 86,039,000 |
100219 | HL040 | S4 | JD-CPG97k+30k-Breast_cancer_01373B09-Jan15-B4 | Zhang Lab | 60 | 870,182,000 |
100219 | HL040 | S5 | JD-CPG97K-BreastCancer-09075B09-Feb17-15E | Zhang Lab | 60 | 757,280,000 |
100219 | HL040 | S6 | JD-CPG97K-BreastCancer-09075B09-Feb17-15R | Zhang Lab | 60 | 1,046,148,000 |
100219 | HL040 | S7 | AL-DigiQ-CVF-Feb17 w/ PhiX | Zhang Lab | 60 | 993,905,000 |
AL-DigiQ-CVF-Jan29 | ||||||
100219 | HL040 | S8 | KZ-DigiQ-FS_6N-Jan27 | Zhang Lab | 60 | 0 |
PhiX | ||||||
100212 | HL039 | S1 | JD-CPGmm9A-CtmESC-Feb10 | Zhang Lab | 60 | 736,934,000 |
AL-DigiQ-CViB/iF-Jan29 | ||||||
100212 | HL039 | S2 | KZ-DigiQ-FS_300BP-Jan27 | Zhang Lab | 60 | 0 |
PhiX | ||||||
100212 | HL039 | S3 | HMS-GC-exome-Nim-GT | Zhang Lab | 60 | 833,000 |
100212 | HL039 | S4 | HMS-GC-Exome-PGP4 | Zhang Lab | 60 | 734,357,000 |
100212 | HL039 | S5 | JD-CPG97K-Breastcancer_03170B09-Jan28-B7 | Zhang Lab | 60 | 1,238,744,000 |
100212 | HL039 | S6 | JD-CPG97K-Breast_Cancer_03259B09-Jan28-B8 | Zhang Lab | 60 | 1,103,439,000 |
100212 | HL039 | S7 | AL-Exome-CViB-AB_Jan28 | Zhang Lab | 60 | 0 |
100212 | HL039 | S8 | JD-CPGmm9A-TETmESC-Feb10 | Zhang Lab | 60 | 1,348,896,000 |
Date | Probe Set | Tube Label | Conc. X vol | Seq facility | Lib. Const. | Read Length | # filtered reads | # mappable reads | |
Feb 7 | HL038 | Exome | s1,AL-Exome-CViB-AB-Jan28 | - | Zhang Lab | Alice | 60bp | 2,631,195 | |
Feb 7 | HL038 | BSPP | s2,JD-cpg97k-Breastcancer_sample_01373B09-Jan28 | - | Zhang Lab | Jie | 60bp | 28,592,257 | 73% |
Feb 7 | HL038 | BSPP | s3,JD-cpg97k-Breastcancer_sample_01436B09_Jan28 | - | Zhang Lab | Jie | 60bp | 28,611,301 | 72% |
Feb 7 | HL038 | Exome | s4,KZ-Exome-CViB-N2-Jan28 | - | Zhang Lab | Kun | 60bp | 22,996,517 | |
Feb 7 | HL038 | BSPP | s5,JD-cpg97k-Harvard_sample_M0013.1-Jan28 | - | Zhang Lab | Jie | 60bp | 27,703,912 | |
Feb 7 | HL038 | BSPP | s6,JD-cpg97k-Harvard_sample_M0077.3-Jan28 | - | Zhang Lab | Jie | 60bp | 28,515,530 | |
Feb 7 | HL038 | BSPP | s7,JD-cpg97k-Harvard_sample_M0124.3-Jan28 | - | Zhang Lab | Jie | 60bp | 27,796,744 | |
Feb 7 | HL038 | BSPP | s8,JD-cpg97k-Harvard_sample_M0188.3-Jan28 | - | Zhang Lab | Jie | 60bp | 26,285,658 | |
Feb 2 | HL037 | BSPP | s1,JD-B3 | - | Zhang Lab | Alice | 60bp | 329192 | |
Feb 2 | HL037 | DigiQ | s2,AL-DigiQ-CVF-Jan29/KZ-DigiQ-FS_6N-Jan27 | - | Zhang Lab | Jie | 60bp | 396995 | |
Feb 2 | HL037 | Exome | s3,AL-Exome-DF-Jan26-Nimblegen | - | Zhang Lab | Alice | 60bp | 24111229 | 86% |
Feb 2 | HL037 | BSPP | s4,KZ-BSPP-B2-N2-Jan28 | - | Zhang Lab | Kun | 60bp | 24816617 | 22%/60%(hg18) |
Feb 2 | HL037 | Exome | s5,AL-Exome-CViB-AB-Jan28 | - | Zhang Lab | Alice | 60bp | 2627559 | 86% |
Feb 2 | HL037 | Exome | s6,AL-Exome-CViB-CDE-Jan28 | - | Zhang Lab | Alice | 60bp | 26225044 | 78% |
Feb 2 | HL037 | DigiQ | s7, AL-DigiQ-CViB-iF-Jan29/KZ-DigiQ-FS_300P-Jan27 | - | Zhang Lab | Alice | 60bp | 461181 | |
Feb 2 | HL037 | Exome | s8,AL-Exome-FS-Jan26-Nimblegen | - | Zhang Lab | Alice | 60bp | 20920646 | 90% |
Jan 27 | HL036 | Exome | s1,AL-Exome-DF-Jan26-Nimblegen | - | Zhang Lab | Alice | 60bp | 29,983,562 | 86.81% |
Jan 27 | HL036 | DigiQ | s2,AL-DigiQ-CViB/iF-Jan26 | - | Zhang Lab | Alice | 60bp | 884920 | |
Jan 27 | HL036 | BSPP | s3,JD-CPG97K-Harvard_Sample_B0134.1-Jan22 | - | Zhang Lab | Jie | 60bp | 17,618,873 | 26%/68%(hg18) |
Jan 27 | HL036 | Exome | s4,AL-Exome-FS-Jan26-Nimblegen | - | Zhang Lab | Alice | 60bp | 30,430,624 | 89.97% |
Jan 27 | HL036 | BSPP | s5,JD-CPG97K-Harvard_Sample_B0107.1-Jan22 | - | Zhang Lab | Jie | 60bp | 13,332,549 | 34%/70%(hg18) |
Jan 27 | HL036 | BSPP | s6,JD-CPG97K-Harvard_Sample_B0108.1-Jan22 | - | Zhang Lab | Jie | 60bp | 15,408,196 | 36%/72%(hg18) |
Jan 27 | HL036 | DigiQ | s7, AL-DigiQ-CVF-Jan26 | - | Zhang Lab | Alice | 60bp | failed | |
Jan 27 | HL036 | BSPP | s8,JD-CPG97k+30k-Breast_Cancer_01192B09-Jan15 | - | Zhang Lab | Jie | 60bp | 17,643,295 | 14.5%/62%(hg18) |
Jan 23 | HL035 | Exome | s2,HMS-GC-Exome-PGP2 | - | Zhang Lab | Alice | 60bp | 28,245,781 | |
Jan 23 | HL035 | Exome | s3,HMS-GC-Exome-PGP3 | - | Zhang Lab | Alice | 60bp | 27,995,793 | |
Jan 23 | HL035 | Exome | s4,HMS-GC-Exome-PGP3 | - | Zhang Lab | Alice | 60bp | 23,101,612 | |
Jan 23 | HL035 | BSPP | s5,JD-CPG97K-HarvardB0047.1-Jan22 | - | Zhang Lab | Jie | 60bp | 10,279,091 | 17% |
Jan 23 | HL035 | BSPP | s6,JD-CPG97K+30K-HarvardB0060.1-Jan22 | - | Zhang Lab | Jie | 60bp | 12,433,511 | 31% |
Jan 23 | HL035 | BSPP | s7,JD-CPG97K-HarvardB0070.1-Jan22 | - | Zhang Lab | Jie | 60bp | 14,238,777 | 36% |
Jan 23 | HL035 | Exome | s8,AL-Exome-PGP7-Jan18 | - | Zhang Lab | Alice | 60bp | 7,225,106 | |
Jan 13 | HL034 | Exome | s1,HMS-GC-Exome-PGP5-Oct09 | - | Zhang Lab | Billy/Luhan | 60bp | 15,630,851 | |
Jan 13 | HL034 | DigiQ | s2,HMS-GC-Exome-PGP5-Oct09 | - | Zhang Lab | Billy/Luhan | 60bp | 16,208,687 | |
Jan 13 | HL034 | Exome | s3,AL-Exome-CViB-Jan14-AB | - | Zhang Lab | Alice | 60bp | 15,754,533 | |
Jan 13 | HL034 | Ctrl | s4,AL-Exome-CViB-Jan14-AB | - | Zhang Lab | Alice | 60bp | 15,864,921 | |
Jan 13 | HL034 | Exome | s5,AL-Exome-CViB-Jan14-CDE | - | Zhang Lab | Alice | 60bp | 15,761,086 | |
Jan 13 | HL034 | Exome | s6,AL-Exome-CViB-Jan14-CDE | - | Zhang Lab | Alice | 60bp | 15,795,450 | |
Jan 13 | HL034 | BSPP | s7,JD-cpg97k+30k-BC-01230B09-Jan15 | - | Zhang Lab | Jie | 60bp | 12,246,857 | 26% |
Jan 13 | HL034 | Exome | s8,HMS-GC-exome-Nim-GT | - | Zhang Lab | Billy/Luhan | 60bp | 7,671,888 | |
Jan 13 | HL033 | Exome | s1,HMS-GC-exome-Nim-GT | - | Zhang Lab | Billy/Luhan | 60bp | 9,619,807 | |
Jan 13 | HL033 | DigiQ | s2,KZ-DigiQ-DF-Jan11/AL-DigiQ-CVF-Jan12 | - | Zhang Lab | Alice/Kun | 60bp | 5,020,038 | |
Jan 13 | HL033 | BisExSeq | s3,HL-BisExon-NA20431 | - | Zhang Lab | Alan | 60bp | 11,363,087 | 75% |
Jan 13 | HL033 | Ctrl | s4,PhiX | - | Zhang Lab | Illumina | 60bp | 4,589,847 | |
Jan 13 | HL033 | Exome | s5,AL-Exome-CViB-Jan12-AB | - | Zhang Lab | Alice | 60bp | 1,647,688(overloaded) | |
Jan 13 | HL033 | Exome | s6,AL-Exome-CViB-Jan12-CDE | - | Zhang Lab | Alice | 60bp | 13,489(overloaded) | |
Jan 13 | HL033 | DigiQ | s7, KZ-DigiQ-FS-Jan11/AL-DigiQ-CViB-Jan12 | - | Zhang Lab | Alice/Kun | 60bp | 5,903,015 | |
Jan 13 | HL033 | Exome | s8, AL-Exome-CViB-Jan12-AB | - | Zhang Lab | Kun | 60bp | 978,032(overloaded) | |
Jan 05 | HL032 | DigiQ | s1,AL-DigiQ-CVF-Dec23 | - | Zhang Lab | Alice | 60bp | 14,950,591 | |
Jan 05 | HL032 | DigiQ | s2,AL-DigiQ-CViB-Dec23 | - | Zhang Lab | Alice | 60bp | 14,520,807 | |
Jan 05 | HL032 | DigiQ | s3,KZ-DigiQ-DF-Jan04 | - | Zhang Lab | Kun | 60bp | 10,753,395 | |
Jan 05 | HL032 | Ctrl | s4,PhiX | - | Zhang Lab | Illumina | 60bp | 25,057(bad DNA) | |
Jan 05 | HL032 | RRS | s5,KZ-RRS-CVF1-Nov27 | - | Zhang Lab | Kun | 60bp | 8,295,917 | |
Jan 05 | HL032 | RRS | s6,KZ-RRS-CViF1-Nov27 | - | Zhang Lab | Kun | 60bp | 8,810,014 | |
Jan 05 | HL032 | DigiQ | s7, KZ-DigiQ-FS-Jan04 | - | Zhang Lab | Kun | 60bp | 10,177,605 | |
Jan 05 | HL032 | Exome | s8,HMS-GC-PGP8A-Nov1 | - | Zhang Lab | Billy/Luhan | 60bp | 13,216,056 |
2009
Jul-Dec
Month | Date | Probe Set | Tube label | Conc. x vol. | Seq facility | Lib. Const. | Read length | # filtered reads | # mappable reads | |
Dec 29 | HL030 | Exome | s1,PGP9 | - | Zhang Lab | Billy/Luhan | 60bp | 14,705,217 | ||
Dec 29 | HL030 | Exome | s2,PGP9 | - | Zhang Lab | Billy/Luhan | 60bp | 14,950,591 | ||
Dec 29 | HL030 | Exome | s3,PGP9 | - | Zhang Lab | Billy/Luhan | 60bp | 14,832,179 | ||
Dec 29 | HL030 | Exome | s4,NA12878 | - | Zhang Lab | Billy/Luhan | 60bp | 15,414,631 | ||
Dec 29 | HL030 | Exome | s5,NA12878 | - | Zhang Lab | Billy/Luhan | 60bp | 15,536,069 | ||
Dec 29 | HL030 | Exome | s6,NA12878 | - | Zhang Lab | Billy/Luhan | 60bp | 15,767,169 | ||
Dec 29 | HL030 | Hap | s7, HC-MDA-hCell-Dec17-sam006 | - | Zhang Lab | Sam(12/17/09) | 60bp | 15,094,541 | ||
Dec 29 | HL030 | ? | s8,TM | - | Zhang Lab | Palsson | 60bp | 2,384(Failed) | ||
Dec 26 | AL008 | Hap | s1, HC-MDA-hCell-Dec17-sam003 | - | Zhang Lab | Sam(12/17/09) | 60bp | 15,826,724 | ||
Dec 26 | AL008 | Hap | s2, HC-MDA-hCell-Dec17-sam004 | - | Zhang Lab | Sam(12/17/09) | 60bp | 7,814,019 | ||
Dec 26 | AL008 | Hap | s3, HC-MDA-hCell-Dec17-sam005 | - | Zhang Lab | Sam(12/17/09) | 60bp | 4,516,674 | ||
Dec 26 | AL008 | DigiQuant | s4,PCR-CV-iB(w/PhiX) | - | Zhang Lab | Alice | 60bp | 5,625,091 | ||
Dec 26 | AL008 | BSPP | s5,B2-175bp | - | Zhang Lab | Ida | 60bp | 2,629,431 | 22% | |
Dec 26 | AL008 | BSPP | s6,B2-200bp | - | Zhang Lab | Ida | 60bp | 3,834,872 | 21% | |
Dec 26 | AL008 | BSPP | s7,H2-175bp | - | Zhang Lab | Ida | 60bp | 8,081,341 | 26% | |
Dec 26 | AL008 | BSPP | s8,H2-200bp | - | Zhang Lab | Ida | 60bp | 10,992,765 | 30% | |
Dec 22 | AL007 | DigiQuant | s2,PCR-CV-hiPS-F | - | Zhang Lab | Alice | 60bp | 0(overloaded) | ||
Dec 22 | AL007 | Exome | s3,CV-iB-ACE | - | Zhang Lab | Kun | 60bp | 1,235,398 | ||
Dec 22 | AL007 | Exome | s4,CV-iB-BD | - | Zhang Lab | Kun | 60bp | 642,138 | ||
Dec 22 | AL007 | BSPP | s5,Har1 | - | Zhang Lab | Ida | 60bp | 6,610,330 | 12% | |
Dec 22 | AL007 | BSPP | s6,Har2 | - | Zhang Lab | Ida | 60bp | 5,347,364 | 20% | |
Dec 22 | AL007 | BSPP | s7,Har3 | - | Zhang Lab | Ida | 60bp | 15,243,209 | 26% | |
Dec 22 | AL007 | BSPP | s8,Har4 | - | Zhang Lab | Ida | 60bp | 14,904,014 | 24% | |
Dec 18 | AL006 | DigiQuant | s2,PCR-CV-hiPS-F(w/phiX) | - | Zhang Lab | Alice | 60bp | 18,527,480 | ||
Dec 18 | AL006 | RRS | s3,DpnII-CV-Fibroblast1 | - | Zhang Lab | Kun | 60bp | 9,278,480 | ||
Dec 18 | AL006 | RRS | s4,DpnII-CV-hiPS-F | - | Zhang Lab | Kun | 60bp | 7,530,675 | ||
Dec 18 | AL006 | Exome | s5,PGP8C | - | Zhang Lab | Billy/Luhan | 60bp | 11,320,511 | ||
Dec 18 | AL006 | Exome | s6,PGP9 | - | Zhang Lab | Billy/Luhan | 60bp | 7,466,479 | ||
Dec 18 | AL006 | BSPP | s7,Har9 | - | Zhang Lab | Jie | 60bp | 16,529,111 | 28% | |
Dec 18 | AL006 | BSPP | s8,Har10 | - | Zhang Lab | Jie | 60bp | 15,507,608 | 11% | |
Dec 09 | HL029 | Exome | s1,PGP4, #8-9 | - | Zhang Lab | Billy/Luhan | 60bp | 11,299,862 | ||
Dec 09 | HL029 | Exome | s2,PGP6, #8-9 | - | Zhang Lab | Billy/Luhan | 60bp | 10,572,824 | ||
Dec 09 | HL029 | Exome | s3,PGP9 | - | Zhang Lab | Billy/Luhan | 60bp | 9,577,578 | ||
Dec 09 | HL029 | Exome | s4,PGP10,#8-9 | - | Zhang Lab | Billy/Luhan | 60bp | 13,012,173 | ||
Dec 09 | HL029 | Exome | s5,CV-hiPS-B | - | Zhang Lab | Alan | 60bp | 16,316,464 | ||
Dec 09 | HL029 | Exome | s6,CV-hiPS-B | - | Zhang Lab | Alan | 60bp | 17,365,795 | ||
Dec 09 | HL029 | Exome | s7,CV-hiPS-B | - | Zhang Lab | Alan | 60bp | 16,012,994 | ||
Dec 09 | HL029 | Exome | s8,CV-hiPS-B | - | Zhang Lab | Alan | 60bp | 1,602,572 | ||
Dec 06 | HL028 | RRS | s1,Dpn-CV-F2 | - | Zhang Lab | Kun | 60bp | 7,073,505 | ||
Dec 06 | HL028 | RRS | s2,Dpn-CV-F2 | - | Zhang Lab | Kun | 60bp | 7,060,114 | ||
Dec 06 | HL028 | RRS | s3,Dpn-CV-iF2 | - | Zhang Lab | Kun | 60bp | 6,001,805 | ||
Dec 06 | HL028 | RRS | s4,Dpn-CV-iF2 | - | Zhang Lab | Kun | 60bp | 3,264,795 | ||
Dec 06 | HL028 | Exome | s5,CV-iB (A,C) | - | Zhang Lab | Billy/Luhan | 60bp | 7,511,894 | ||
Dec 06 | HL028 | Exome | s6,PGP8D | - | Zhang Lab | Billy/Luhan | 60bp | 9,310,623 | ||
Dec 06 | HL028 | Exome | s7,PGP8E | - | Zhang Lab | Billy/Luhan | 60bp | 11,224,269 | ||
Dec 06 | HL028 | Exome | s8,PGP8 | - | Zhang Lab | Billy/Luhan | 60bp | 5,999,123 | ||
Dec 02 | HL027 | RRS | s1,Dpn-CV-iB1 | - | Zhang Lab | Kun | 60bp | 10,747,192 | ||
Dec 02 | HL027 | RRS | s2,Dpn-CV-iF1 | - | Zhang Lab | Kun | 60bp | 9,030,411 | ||
Dec 02 | HL027 | RRS | s3,Dpn-CV-F1 | - | Zhang Lab | Kun | 60bp | 9,935,148 | ||
Dec 02 | HL027 | RRS | s4,CV-iB (A,C) | - | Zhang Lab | Alan | 60bp | 13,456,232 | ||
Dec 02 | HL027 | Exome | s5,CV-iB (A,C) | - | Zhang Lab | Alan | 60bp | 13,137,026 | ||
Dec 02 | HL027 | Exome | s6,CV-iB (B,D,E) | - | Zhang Lab | Alan | 60bp | 16,102,120 | ||
Dec 02 | HL027 | Exome | s7,CV-iB (B,D,E) | - | Zhang Lab | Alan | 60bp | 15,933,168 | ||
Dec 02 | HL027 | Exome | s8,PGP8a | - | Zhang Lab | Billy/Luhan | 60bp | 11,956,198 | ||
Nov 27 | HL026 | Exome | s1,CV-fibroblast (Alice) | - | Zhang Lab | Alan | 60bp | 17,121,798 | ||
Nov 27 | HL026 | Exome | s2,CVF-N(Covaris) | - | Zhang Lab | Alan | 60bp | 12,577,956 | ||
Nov 27 | HL026 | Exome | s3,CVF-N(Covaris) | - | Zhang Lab | Alan | 60bp | 11,767,869 | ||
Nov 27 | HL026 | Exome | s4,CVF-N(Covaris) | - | Zhang Lab | Alan | 60bp | 12,212,818 | ||
Nov 27 | HL026 | Exome | s5,CV-iPS (#1-7) | - | Zhang Lab | Alan | 60bp | 18,413,190 | ||
Nov 27 | HL026 | Exome | s6,DF6(#1-7) | - | Zhang Lab | Alan | 60bp | 18,035,161 | ||
Nov 27 | HL026 | Exome | s7,Foreskin(#1-7) | - | Zhang Lab | Alan | 60bp | 17,939,296 | ||
Nov 27 | HL026 | Exome | s8,CVF-N(USER/S1, A/B) | - | Zhang Lab | Alan | 60bp | 9,364,209 | ||
Nov 27 | HL025 | Exome | s1,PGP3 #8-9 | - | Zhang Lab | Alan | 60bp | 9,106,173 | ||
Nov 27 | HL025 | Exome | s2,PGP5 #8-9 | - | Zhang Lab | Alan | 60bp | 10,174,527 | ||
Nov 23 | HL025 | Exome | s3,PGP7 #8-9 | - | Zhang Lab | Alan | 60bp | 16,653,644 | ||
Nov 23 | HL025 | Exome | s4,CpgSeq Harvard #2 | - | Zhang Lab | Jie | 60bp | failed | ||
Nov 23 | HL025 | Exome | s5,CpgSeq Harvard #5 | - | Zhang Lab | Jie | 60bp | 12914061 | ||
Nov 23 | HL025 | Exome | s6,CV-fibroblast #1-7 (Alice) | - | Zhang Lab | Alan | 60bp | 17,745,112 | ||
Nov 23 | HL025 | Exome | s7,CV-iPS #1-7 (Alice) | - | Zhang Lab | Alan | 60bp | 18,466,358 | ||
Nov 23 | HL025 | Exome | s8,CV-fibroblast New (#6-7) | - | Zhang Lab | Alan | 60bp | 10,392,332 | ||
Nov 19 | HL024 | Exome | s1,PGP1L, set 1-7 | - | Zhang Lab | Alice(10/28) | 60bp | 16,060,639 | ||
Nov 19 | HL024 | Exome | s2,PGP1L, set 1-7 | - | Zhang Lab | Alice(10/28) | 60bp | 16,406,685 | ||
Nov 19 | HL024 | Exome | s3,PGP1L, set 8 | - | Zhang Lab | Alice(10/28) | 60bp | 13,861,016 | ||
Nov 19 | HL024 | Exome | s4,PGP1L, set 9 | - | Zhang Lab | Alice(10/28) | 60bp | 12,455,546 | ||
Nov 19 | HL024 | Hap | s5,N12 | - | Zhang Lab | Sam | 60bp | 11,320,511 | ||
Nov 19 | HL024 | Exome | s6,PGP8B | - | Zhang Lab | Billy/Luhan | 60bp | 7,466,479 | ||
Nov 19 | HL024 | BCM | s7,P1 (Baylor) | - | Zhang Lab | Baylor | 60bp | 4,934,597 | ||
Nov 19 | HL024 | BCM | s8,P4 (Baylor) | - | Zhang Lab | Baylor | 60bp | 1,602,572 | ||
Nov 13 | HL023 | Exome | s1,PGP1-iPS, set 1-7 | - | Zhang Lab | Alan(11/05) | 60bp | 12,404,414 | ||
Nov 13 | HL023 | Exome | s2,PGP1-iPS, set 1-7 | - | Zhang Lab | Alan(11/05) | 60bp | 13,314,169 | ||
Nov 13 | HL023 | Exome | s3,PGP1-iPS, set 8 | - | Zhang Lab | Alan(11/05) | 60bp | 16,787,057 | ||
Nov 13 | HL023 | Exome | s4,PGP1-iPS, set 9 | - | Zhang Lab | Alan(11/05) | 60bp | 15,362,879 | ||
Nov 13 | HL023 | Exome | s5,DF6-9-9, set 8 | - | Zhang Lab | Alice(10/28) | 60bp | 16,614,857 | ||
Nov 13 | HL023 | Exome | s6,DF6-9-9, set 9 | - | Zhang Lab | Alice(10/28) | 60bp | 16,897,414 | ||
Nov 13 | HL023 | Exome | s7,Foreskin, set 8 | - | Zhang Lab | Alice(10/28) | 60bp | 16,023,565 | ||
Nov 13 | HL023 | Exome | s8,Foreskin, set 9 | - | Zhang Lab | Alice(10/28) | 60bp | 10,656,758 | ||
Nov 09 | HL022 | Exome | s1,DF6-9-9, set 1-7 | - | Zhang Lab | Alice(10/28) | 60bp | 12,652,000 | ||
Nov 09 | HL022 | Exome | s2,DF6-9-9, set 1-7 | - | Zhang Lab | Alice(10/28) | 60bp | 11,579,830 | ||
Nov 09 | HL022 | Exome | s3,Foreskin, set 1-7 | - | Zhang Lab | Alice(10/28) | 60bp | 9,624,602 | ||
Nov 09 | HL022 | Exome | s4,Foreskin, set 1-7 | - | Zhang Lab | Alice(10/28) | 60bp | 8,249,755 | ||
Nov 09 | HL022 | Exome | s5,CV-iPS (new), set 1-7 | - | Zhang Lab | Alan(11/05) | 60bp | 10,237,538 | ||
Nov 09 | HL022 | Exome | s6,CV-iPS (new), set 1-7 | - | Zhang Lab | Alan(11/05) | 60bp | 10,621,342 | ||
Nov 09 | HL022 | Exome | s7,CV-iPS (new), set 1-7 | - | Zhang Lab | Alan(11/05) | 60bp | 14,439,349 | ||
Nov 09 | HL022 | Exome | s8, ChrWGA-N10 | - | Zhang Lab | Sam | 60bp | 8,624,207 | ||
Oct 29 | HL020 | Exome | s1,CV-iPS, set 8 | - | Zhang Lab | Alice(10/28) | 60bp | 15,416,990 | ||
Oct 29 | HL020 | Exome | s2,CV-iPS, set 9 | - | Zhang Lab | Alice(10/28) | 60bp | 17,569,551 | ||
Oct 29 | HL020 | Exome | s3,CV-fibroblast, set 8 | - | Zhang Lab | Alice(10/28) | 60bp | 16,895,701 | ||
Oct 29 | HL020 | Exome | s4,CV-fibroblast, set 9 | - | Zhang Lab | Alice(10/28) | 60bp | 15,502,227 | ||
Oct 29 | HL020 | Exome | s5,NA12878, set 8 | - | Zhang Lab | Alice(10/28) | 60bp | 16,231,983 | ||
Oct 29 | HL020 | Exome | s6,NA12878, set 8 | - | Zhang Lab | Alice(10/28) | 60bp | 17,231,313 | ||
Oct 29 | HL020 | Exome | s7,NA12878, set 9 | - | Zhang Lab | Alice(10/28) | 60bp | 16,903,121 | ||
Oct 29 | HL020 | Exome | s8,NA12878, set 9 | - | Zhang Lab | Alice(10/28) | 60bp | 13,743,218 | ||
Oct 26 | HL019 | CTM | s1,PGP1L-CTM1(HpaII) | - | Zhang Lab | Zymo | 40bp | |||
Oct 26 | HL019 | CTM | s2,PGP1L-CTM2(MspI) | - | Zhang Lab | Zymo | 40bp | |||
Oct 26 | HL019 | CTM | s3,PGP1L-CTM3(4-RE) | - | Zhang Lab | Zymo | 40bp | |||
Oct 26 | HL019 | Exome | s4,PGP4 | - | Zhang Lab | Billy | 40bp | |||
Oct 26 | HL019 | Exome | s5,PGP4 | - | Zhang Lab | Billy | 40bp | |||
Oct 26 | HL019 | Exome | s6,PGP6 | - | Zhang Lab | Billy | 40bp | |||
Oct 26 | HL019 | Exome | s7,PGP6 | - | Zhang Lab | Billy | 40bp | |||
Oct 26 | HL019 | Exome | s8,PGP10 | - | Zhang Lab | Billy | 40bp | |||
Oct 23 | HL018 | Exome | s1,PGP1-iPS | - | Zhang Lab | Alice(10/09) | 40bp | 14,503,245 | ||
Oct 23 | HL018 | Exome | s2,PGP1-iPS | - | Zhang Lab | Alice(10/09) | 40bp | 14,834,731 | ||
Oct 23 | HL018 | Exome | s3,NA12878_EL_140.2 | - | Zhang Lab | Kun | 40bp | 16,130,004 | ||
Oct 23 | HL018 | Exome | s4,NA12878_EL_140.2 | - | Zhang Lab | Kun | 40bp | 16,868,359 | ||
Oct 23 | HL018 | Exome | s5,NA12878_EL_140.2 | - | Zhang Lab | Kun | 40bp | 18,464,088 | ||
Oct 23 | HL018 | Exome | s6,NA12878_EL_140.2 | - | Zhang Lab | Kun | 40bp | 18,744,329 | ||
Oct 23 | HL018 | Exome | s7,CV-iPS | - | Zhang Lab | Alice(10/09) | 40bp | 17,369,523 | ||
Oct 23 | HL018 | Exome | s8,CV-Fibroblast | - | Zhang Lab | Alice(10/09) | 40bp | 15,991,415 | ||
Oct 20 | HL017 | Exome | s1,PGP1-iPS | - | Zhang Lab | Alice(10/09) | 40bp | 16,124,303 | ||
Oct 20 | HL017 | Exome | s2,DF6-9-9 | - | Zhang Lab | Alice(10/09) | 40bp | 18,701,054 | ||
Oct 20 | HL017 | Exome | s3,Foreskin | - | Zhang Lab | Alice(10/09) | 40bp | 17,660,876 | ||
Oct 20 | HL017 | Exome | s4,CV-iPS | - | Zhang Lab | Alice(10/09) | 40bp | 17,798,921 | ||
Oct 20 | HL017 | Exome | s5,CV-iPS | - | Zhang Lab | Alice(10/09) | 40bp | 18,054,888 | ||
Oct 20 | HL017 | Exome | s6,CV-fibroblast | - | Zhang Lab | Alice(10/09) | 40bp | 18,120,291 | ||
Oct 20 | HL017 | Exome | s7,NA12878_EL_140.2 | - | Zhang Lab | Kun | 40bp | 17,106,926 | ||
Oct 20 | HL017 | Exome | s8,NA12878_EL_140.3 | - | Zhang Lab | Kun | 40bp | 17,261,477 | ||
Oct 18 | HL016 | Exome | s1,CV-fibroblast | - | Zhang Lab | Alice(10/09) | 40bp | 15,670,145 | ||
Oct 18 | HL016 | Exome | s2,CV-fibroblast | - | Zhang Lab | Alice(10/09) | 40bp | 15,907,544 | ||
Oct 18 | HL016 | Exome | s3,CV-iPS | - | Zhang Lab | Alice(10/09) | 40bp | 15,818,281 | ||
Oct 18 | HL016 | Exome | s4,CV-iPS | - | Zhang Lab | Alice(10/09) | 40bp | 16,080,730 | ||
Oct 18 | HL016 | Exome | s5,DF6 | - | Zhang Lab | Alice(10/09) | 40bp | 16,231,745 | ||
Oct 18 | HL016 | Exome | s6,DF6 | - | Zhang Lab | Alice(10/09) | 40bp | 16,377,593 | ||
Oct 18 | HL016 | Exome | s7,Foreskin | - | Zhang Lab | Alice(10/09) | 40bp | 15,732,166 | ||
Oct 18 | HL016 | Exome | s8,Foreskin | - | Zhang Lab | Alice(10/09) | 40bp | 15,019,512 | ||
Oct 15 | HL015 | Exome | s1,PGP8 | - | Zhang Lab | Billy | 40bp | 13,429,437 | ||
Oct 15 | HL015 | Exome | s2,PGP8 | - | Zhang Lab | Billy | 40bp | 13,978,474 | ||
Oct 15 | HL015 | Exome | s3,PGP8 | - | Zhang Lab | Billy | 40bp | 13,935,910 | ||
Oct 15 | HL015 | Exome | s4,PGP9 | - | Zhang Lab | Billy | 40bp | 13,692,249 | ||
Oct 15 | HL015 | Exome | s5,PGP9 | - | Zhang Lab | Billy | 40bp | 12,912,972 | ||
Oct 15 | HL015 | Exome | s6,PGP9 | - | Zhang Lab | Billy | 40bp | 12,823,767 | ||
Oct 15 | HL015 | Exome | s7,NA12878 | - | Zhang Lab | Billy | 40bp | 16,883,674 | ||
Oct 15 | HL015 | Exome | s8,NA12878 | - | Zhang Lab | Billy | 40bp | 15,379,183 | ||
Oct 12 | HL014 | Exome | s1,DF6-9-9 | - | Zhang Lab | Alice(10/09) | 40bp | 8,305,141 | ||
Oct 12 | HL014 | Exome | s2,foreskin | - | Zhang Lab | Alice(10/09) | 40bp | 8,488,946 | ||
Oct 12 | HL014 | Exome | s3,PGP1-ips | - | Zhang Lab | Alice(10/09) | 40bp | 5,966,433 | ||
Oct 12 | HL014 | Exome | s4,CV-ips | - | Zhang Lab | Alice(10/09) | 40bp | 4,351,085 | ||
Oct 12 | HL014 | Exome | s5,CV-fibroblast | - | Zhang Lab | Alice(10/09) | 40bp | 3,621,861 | ||
Oct 12 | HL014 | Exome | s6,PGP7 | - | Zhang Lab | Alice(10/09) | 40bp | 11,805,391 | ||
Oct 12 | HL014 | Exome | s7,PGP8 | - | Zhang Lab | Billy | 40bp | 14,330,453 | ||
Oct 12 | HL014 | Exome | s8,PGP9 | - | Zhang Lab | Billy | 40bp | 12,477,329 | ||
Oct 08 | HL013 | Exome | s1,PGP1 | - | Zhang Lab | Billy | 40bp | 14872773 | ||
Oct 08 | HL013 | Exome | s2,PGP2 | - | Zhang Lab | Billy | 40bp | 13777534 | ||
Oct 08 | HL013 | Exome | s3,PGP3 | - | Zhang Lab | Billy | 40bp | 10536677 | ||
Oct 08 | HL013 | Exome | s4,PGP5 | - | Zhang Lab | Billy | 40bp | 8445974 | ||
Oct 08 | HL013 | BSPP-30k | s5,DF6-9-9-cpg30k | - | Zhang Lab | Ida | 40bp | 9684020 | ||
Oct 08 | HL013 | BSPP-30k | s6,Foreskin | - | Zhang Lab | Ida | 40bp | 13740681 | ||
Oct 08 | HL013 | USC-Hsieh | s7,USC,MH010B xMboI | - | Zhang Lab | Kyle | 40bp | 18388915 | ||
Oct 08 | HL013 | USC-Hsieh | s8,USC,TCF #3 | - | Zhang Lab | Kyle | 40bp | 14866071 | ||
Oct 05 | HL011 | Exome | s1,PGP8 | - | Zhang Lab | Billy | 40bp | |||
Oct 05 | HL011 | Exome | s2,PGP8 | - | Zhang Lab | Billy | 40bp | |||
Oct 05 | HL011 | Exome | s3,PGP9 | - | Zhang Lab | Billy | 40bp | |||
Oct 05 | HL011 | Exome | s4,PGP9 | - | Zhang Lab | Billy | 40bp | |||
Oct 05 | HL011 | Exome | s5,NA12878 | - | Zhang Lab | Billy | 40bp | |||
Oct 05 | HL011 | Exome | s6,NA12878 | - | Zhang Lab | Billy | 40bp | |||
Oct 05 | HL011 | USC-Hsieh | s7,USC,MH010B xMboI | - | Zhang Lab | Kyle | 40bp | |||
Oct 05 | HL011 | USC-Hsieh | s8,USC,TCF #3 | - | Zhang Lab | Kyle | 40bp | |||
Oct 01 | HL012 | Exome | s1,CV-ips (unsheared) | - | Zhang Lab | Alice&Ida | 80bp | 16,072,089 | ||
Oct 01 | HL012 | Exome | s2,CV-Fibr(unsheared) | - | Zhang Lab | Alice&Ida | 80bp | 16,826,803 | ||
Oct 01 | HL012 | Exome | s3,NA21687, Cpg97k | - | Zhang Lab | Ida | 80bp | 8,235,105 | ||
Oct 01 | HL012 | Exome | s4,PhiX | - | Zhang Lab | Illumina | 80bp | 14,496,850 | ||
Oct 01 | HL012 | Exome | s5,NA21781 | - | Zhang Lab | Ida | 80bp | 0 | ||
Oct 01 | HL012 | Exome | s6,NA21833 | - | Zhang Lab | Ida | 80bp | 3,293,913 | ||
Oct 01 | HL012 | Exome | s7,NA21660 | - | Zhang Lab | Ida | 80bp | 8,297 | ||
Oct 01 | HL012 | Exome | s8,NA21731 | - | Zhang Lab | Ida | 80bp | 11,048,272 | ||
Sept 26 | HL010 | Exome | s1,CV-ips | - | Zhang Lab | Alice(09/21) | 40bp | 17,770,197 | 13,270,733 | |
Sept 26 | HL010 | Exome | s2,CV-ips | - | Zhang Lab | Alice | 40bp | 17,143,085 | ||
Sept 26 | HL010 | Exome | s3,CV-fibroblast | - | Zhang Lab | Alice(09/21) | 40bp | 14,248,797 | ||
Sept 26 | HL010 | Exome | s4,CV-fibroblast | - | Zhang Lab | Alice(09/21) | 40bp | 13,741,749 | ||
Sept 26 | HL010 | Exome | s5,DF6-9-9 | - | Zhang Lab | Alice(09/21) | 40bp | 14,210,912 | ||
Sept 26 | HL010 | Exome | s6,foreskin | - | Zhang Lab | Alice(09/21) | 40bp | 14,514,230 | ||
Sept 26 | HL010 | Exome | s7,PGP8 | - | Zhang Lab | Billy | 40bp | 11,980,992 | ||
Sept 26 | HL010 | Exome | s8,PGP9 | - | Zhang Lab | Billy | 40bp | 13,292,848 | ||
Sept 23 | AL003 | Exome | s1,DF6-9-9 | - | Zhang Lab | Alice(09/21) | 40bp | 16,395,953 | 13,954,426 | |
Sept 23 | AL003 | Exome | s2,foreskin | - | Zhang Lab | Alice(09/21) | 40bp | 17,323,121 | 14,344,756 | |
Sept 23 | AL003 | Exome | s3,PGP1-ips | - | Zhang Lab | Alice(09/21) | 40bp | 17,005,060 | ||
Sept 23 | AL003 | Exome | s4,CV-ips | - | Zhang Lab | Alice(09/21) | 40bp | 17,848,289 | 13,344,177 | |
Sept 23 | AL003 | Exome | s5,CV-fibroblast | - | Zhang Lab | Alice(09/21) | 40bp | 18,152,672 | 15,372,979 | |
Sept 23 | AL003 | Exome | s6,NA12878-3 | - | Zhang Lab | Alice(09/21) | 40bp | 18,391,593 | 14,109,009 | |
Sept 23 | AL003 | USC-Hsieh | s7,DK4#2 | - | Zhang Lab | Kyle | 40bp | 13,632,900 | 11,976,351 | |
Sept 23 | AL003 | USC-HSieh | s8,TK9 | - | Zhang Lab | Kyle | 40bp | 16,272,821 | 15,168,255 | |
Sept 18 | AL002 | Exome | s1,DF6-9-9 | - | Zhang Lab | Alice(09/15) | 40bp | 16,173,475 | ||
Sept 18 | AL002 | Exome | s2,foreskin | - | Zhang Lab | Alice(09/15) | 40bp | 10,863,012 | ||
Sept 18 | AL002 | Exome | s3,CV-ips | - | Zhang Lab | Alice(09/15) | 40bp | 8,306,219 | ||
Sept 18 | AL002 | Exome | s4,CV-fibroblast | - | Zhang Lab | Alice(09/15) | 40bp | 3,987,069 | ||
Sept 18 | AL002 | - | s5,PhiX-2nd | - | Zhang Lab | Alice | 40bp | - | ||
Sept 18 | AL002 | USC-Hsieh | s6,MH001 H2 xHeaIII | - | Zhang Lab | Kyle | 40bp | 19,490,463 | 18,566,845 | |
Sept 18 | AL002 | USC-Hsieh | s7,MH010B xDpnI | - | Zhang Lab | Kyle | 40bp | 19,160,830 | 18,435,611 | |
Sept 18 | AL002 | USC-Hsieh | s8,Tk4 #2 | - | Zhang Lab | Kyle | 40bp | 16,343,257 | 15,039,726 | |
Sept 11 | AL001 | Exome | s1,DF6-9-9 | - | Zhang Lab | Alice | 40bp | 5,115,027 | ||
Sept 11 | AL001 | Exome | s2,foreskin | - | Zhang Lab | Alice | 40bp | 1,480,281 | ||
Sept 11 | AL001 | - | s3,PhiX-2nd(re-amplified) | - | Zhang Lab | Alice | 40bp | 12,640,504 | ||
Sept 11 | AL001 | - | s4,PhiX | - | Zhang Lab | - | 40bp | 12,737,950 | ||
Sept 11 | AL001 | BSPP | s5,Na21660-cpg97k | - | Zhang Lab | Jie | 40bp | 1,624,500 | 15% | |
Sept 11 | AL001 | BSPP | s6,DFips-cpg30k+97k | - | Zhang Lab | Jie | 40bp | 12,230,825 | 52% | |
Sept 11 | AL001 | USC-Hsieh | s7,MH010B x DpnI | - | Zhang Lab | Kyle | 40bp | - | ||
Sept 11 | AL001 | USC-Hsieh | s8,Pol II | - | Zhang Lab | Kyle | 40bp | 7,545,937 | 4,581,330 | |
Sept 07 | HL007 | Exome | s1,PGP4 | - | Zhang Lab | Billy | 36bp | 12,221,023 | - | |
Sept 07 | HL007 | Exome | s2,PGP4 | - | Zhang Lab | Billy | 36bp | 12,462,164 | - | |
Sept 07 | HL007 | Exome | s3,PGP6 | - | Zhang Lab | Billy | 36bp | 12,781,093 | - | |
Sept 07 | HL007 | Exome | s4,PGP6 | - | Zhang Lab | Billy | 36bp | 13,207,084 | - | |
Sept 07 | HL007 | Exome | s5,PGP10 | - | Zhang Lab | Billy | 36bp | 11,853,340 | - | |
Sept 07 | HL007 | Exome | s6,PGP10 | - | Zhang Lab | Billy | 36bp | 12,091,086 | - | |
Sept 07 | HL007 | BSPP-97k | s7,50192A | - | Zhang Lab | Jie | 36bp | 17,131,060 | 29% | |
Sept 07 | HL007 | BSPP-97k | s8,50192B | - | Zhang Lab | Jie | 36bp | 16,378,655 | 28% | |
August 29 | HL009-3 | Exome | s1,DF6-9-9 | 60nM | Zhang Lab | Alice | 40bp | - | ||
August 29 | HL009-3 | Exome | s2,DF6-9-9 | 60nM | Zhang Lab | Alice | 40bp | - | ||
August 29 | HL009-3 | Exome | s3,foreskin | 45nM | Zhang Lab | Alice | 40bp | - | ||
August 29 | HL009-3 | Exome | s4,foreskin | 45nM | Zhang Lab | Alice | 40bp | - | ||
August 29 | HL009-3 | Exome | s5,PGP1-ips | 38nM | Zhang Lab | Alice | 40bp | - | ||
August 29 | HL009-3 | Exome | s6,CV-ips | 90nM | Zhang Lab | Alice | 40bp | - | ||
August 29 | HL009-3 | Exome | s7,CV-fibroblast | 76nM | Zhang Lab | Alice | 40bp | - | ||
August 29 | HL009-3 | Exome | s8,PGP1 | 34nM | Zhang Lab | Alice | 40bp | - | ||
August 26 | HL008 | Exome | s1,PGP4 | - | Zhang Lab | Billy | 40bp | 14295243 | - | |
August 26 | HL008 | Exome | s2,PGP6 | - | Zhang Lab | Billy | 40bp | 15558898 | - | |
August 26 | HL008 | Exome | s3,PGP10 | - | Zhang Lab | Billy | 40bp | 15871619 | - | |
August 26 | HL008 | BSPP-97k | s4,50192A | - | Zhang Lab | Jie | 40bp | 10401608 | - | |
August 26 | HL008 | BSPP-97k | s5,50192B | - | Zhang Lab | Jie | 40bp | 9693893 | - | |
August 26 | HL008 | Exome | s6,Foreskin | - | Zhang Lab | Alice | 40bp | 14739764 | - | |
August 26 | HL008 | Exome | s7,PGP4(MmeI) | - | Zhang Lab | Billy | 40bp | 12106286 | - | |
August 26 | HL008 | Control | s8,PhiX | - | Zhang Lab | Illumina | 40bp | 10161944 | - | |
August 16 | HL006 | Exome | s1,DF6-9-9 | - | Zhang Lab | Alice | 40bp | 5,684,406 | - | |
August 16 | HL006 | Exome | s2,Foreskin | - | Zhang Lab | Alice | 40bp | 8,009,671 | - | |
August 16 | HL006 | Exome | s3,Foreskin-lig | - | Zhang Lab | Alice | 40bp | 8,369,819 | - | |
August 16 | HL006 | Exome | s4,NA12878 | - | Zhang Lab | Alice | 40bp | 7,487,512 | - | |
August 16 | HL006 | Exome | s5,NA12878-lig | - | Zhang Lab | Alice | 40bp | 8,411,077 | - | |
August 16 | HL006 | Exome | s6,NA12878 | - | Zhang Lab | Billy | 40bp | 8,556,271 | - | |
August 16 | HL006 | Exome | s7,PGP10 | - | Zhang Lab | Billy | 40bp | 9,736,297 | - | |
August 16 | HL006 | Control | s8,PhiX | - | Zhang Lab | Illumina | 40bp | 6,985,337 | - | |
August 13 | HL005 | Exome | NA12878 | - | Zhang lab | Billy | 40bp | 15,666,228 | ||
August 13 | HL005 | Exome | NA12878 | - | Zhang lab | Billy | 40bp | 14,091,504 | ||
August 13 | HL005 | BSPP-97k | Par1 | - | Zhang lab | Jie Deng | 40bp | 10,385,536 | 3,005,889 | 12% |
August 13 | HL005 | BSPP-97k | Par9 | - | Zhang lab | Jie Deng | 40bp | 7,537,771 | 3,430,524 | 21% |
August 13 | HL005 | USC-Hsieh | MH010B xMboI | - | Zhang lab | Kyle | 40bp | 6,699,431 | 6,125,263 | |
August 13 | HL005 | USC-Hsieh | MH010B xDpnI | - | Zhang lab | Kyle | 40bp | 2,204,512 | 2,094,844 | |
August 13 | HL005 | Exome(end-sequencing) | PGP2S-Phu | 54.5nM | Zhang lab | Alice Li | 40bp | 7,022,465 | 5,950,793 | |
August 13 | HL005 | Exome(end-sequencing) | PGP2S-iProof | 60.6nM | Zhang lab | Alice Li | 40bp | 5,798,969 | 4,756,952 | |
August 09 | HL004 | Exome | s1,DF6-9-9-lig | - | Zhang Lab | Alice | 40bp | 17,147,112 | - | |
August 09 | HL004 | Exome | s2,DF6-9-9-lig | - | Zhang Lab | Alice | 40bp | 16,956,048 | - | |
August 09 | HL004 | Exome | s3,Foreskin-lig | - | Zhang Lab | Alice | 40bp | 16,802,403 | - | |
August 09 | HL004 | Exome | s4,PGP10 | - | Zhang Lab | Billy | 40bp | 18,644,730 | - | |
August 09 | HL004 | Exome | s5,PGP4 | - | Zhang Lab | Billy | 40bp | 18,809,762 | - | |
August 09 | HL004 | Exome | s6,PGP4 | - | Zhang Lab | Billy | 40bp | 18,970,955 | - | |
August 09 | HL004 | Exome | s7,PGP6 | - | Zhang Lab | Billy | 40bp | 18,723,412 | - | |
August 09 | HL004 | Exome | s8,PGP6 | - | Zhang Lab | Billy | 40bp | 19,233,480 | - | |
August 05 | HL003 | Exome | s1,DF6-9-9 | - | Zhang Lab | Alice | 40bp | 4,417,586 | 2,288,789 | |
August 05 | HL003 | Exome | s2,Foreskin | - | Zhang Lab | Alice | 40bp | 5,020,353 | 3,214,546 | |
August 05 | HL003 | Exome | s3,Foreskin-lig | - | Zhang Lab | Alice | 40bp | 6,660,328 | 3,119,331 | |
August 05 | HL003 | Exome | s4,NA12878 | - | Zhang Lab | Alice | 40bp | 3,727,520 | 1,981,326 | |
August 05 | HL003 | Exome | s5,NA12878-lig | - | Zhang Lab | Alice | 40bp | 6,455,281 | 3,253,093 | |
August 05 | HL003 | Exome | s6,NA12878 | - | Zhang Lab | Billy | 40bp | 14,992,076 | 8,643,897 | |
August 05 | HL003 | Exome | s7,PGP10 | - | Zhang Lab | Billy | 40bp | 19,423,381 | 11,040,240 | |
August 05 | HL003 | Control | s8,PhiX | - | Zhang Lab | Illumina | 40bp | 20,078,536 | 19,817,515 | |
July 28 | HL002 | Exome | s1,PhiX | - | Zhang Lab | Illumina | 40bp | 19474917 | - | |
July 28 | HL002 | Exome | s2,Hues 6 ES-Dscp | - | Zhang Lab | Kun | 40bp | 9991852 | - | |
July 28 | HL002 | Exome | s3,Hues 6 ES-trp | - | Zhang Lab | Kun | 40bp | 8386791 | - | |
July 28 | HL002 | Exome | s4,NA12878 | - | Zhang Lab | Alice | 40bp | 15015962 | - | |
July 28 | HL002 | Exome | s5,NA12878 | - | Zhang Lab | Alice | 40bp | 15092576 | - | |
July 28 | HL002 | Exome | s6,NA12878 | - | Zhang Lab | Alice | 40bp | 15223607 | - | |
July 28 | HL002 | Exome | s7,PGP10 | - | Zhang Lab | Alice | 40bp | 15059266 | - | |
July 28 | HL002 | RNA | s8,CES8k-Hybrid1-ES | - | Zhang Lab | Kun | 40bp | 8178891 | - |
Jan-Jun
Month | Date | Probe Set | Tube label | Conc. x vol. | Seq facility | Lib. Const. | Read length | # filtered reads | # mappable reads |
Feb | 6 | BSPP-30k-PE | BJ | 75.4nM x 15ul; | BioGem | Jie | 36bp x 2 | 7,662,828 | 2,535,784 |
Feb | 6 | BSPP-30k-PE | Hybrid_1 | 87.6nM x 15ul; | BioGem | Jie | 36bp x 2 | 6,829,142 | 1,946,531 |
Feb | 6 | BSPP-30k-PE | PGP1_F | 106nM x 15ul; | BioGem | Jie | 36bp x 2 | 8,441,376 | 2,854,604 |
Feb | 6 | BSPP-30k-PE | HUES12 | 74.9nM x 15ul; | BioGem | Jie | 36bp x 2 | 7,404,514 | 1,424,697 |
Feb | 6 | BSPP-30k-PE | PGP1_iPS1 | 90.3nM x 15ul; | BioGem | Jie | 36bp x 2 | 5,617,832 | 1,899,427 |
Feb | 6 | BSPP-30k-PE | PGP1_L | 77.6nM x 15ul; | BioGem | Jie | 36bp x 2 | 5,258,188 | 2,220,886 |
Feb | 6 | BSPP-30k-PE | PGP3_L | 80.9nM x 15ul; | BioGem | Jie | 36bp x 2 | 5,286,442 | 1,838,971 |
Feb | 6 | BSPP-30k-PE | PGP9_L | 96.9nM x 15ul; | BioGem | Jie | 36bp x 2 | 5,689,552 | 2,292,028 |
March | 13 | Exome | PGP1-CTRL | 48.5ng/ul; 30ul | Billy Li (Harvard) | Alice Li | 40bp | 9,707,995 | 7,655,774 |
March | 13 | Exome | PGP1-shaked | 46ng/ul; 30ul | Billy Li (Harvard) | Alice Li | 40bp | 9,424,752 | 7,561,445 |
May | 25 | Exome | PGP1E0509A | 77nM; 40ul | BioGem | Alice Li | 76bp | 7,471,741 | 1,086,264 |
May | 25 | Exome | PGP2E0509A | 64nM; 40ul | BioGem | Alice Li | 76bp | 5,014,823 | 2,595,521 |
May | 25 | Exome | PGP3E0509A | 49.5nM; 40ul | BioGem | Alice Li | 76bp | 5,358,442 | 3,213,790 |
May | 25 | Exome | NA12878E0509A | 60nM; 40ul | BioGem | Alice Li | 76bp | 7,360,495 | 2,673,495 |
May | 25 | Exome | PGP1E0509k | 19nM; 40ul | BioGem | Kun Zhang | 76bp | 3,520,981 | 2,350,708 |
May | 25 | Exome | PGP2E0509k | 20nM; 40ul | BioGem | Kun Zhang | 76bp | 5,095,881 | 2,568,349 |
May | 25 | Exome | PGP3E0509k | 19nM; 40ul | BioGem | Kun Zhang | 76bp | 3,734,068 | 1,989,542 |
May | 25 | Exome | NA12878E0509k | 33nM; 40ul | BioGem | Kun Zhang | 76bp | 3,900,764 | 778,134 |
May | 26 | BSPP_end seq | NA21070*1 100406 captured targets | 25.3ng/ul (96nM) x 15ul; | Yuan Gao | Jie/Kun | 40bp | 2,535,463 | |
May | 26 | BSPP_end seq | NA21070*1 100406 normalized captured targets | 23.1ng/ul (87nM) x 15ul; | Yuan Gao | Jie/Kun | 40bp | 2,377,687 | |
May | 29 | Exome(end sequencing) | PGP2_052909A | 111nM; 15ul | Yuan Gao | Alice Li | 40bp | 6,390,979 | |
May | 29 | Exome(end sequencing) | PGP3_052909A | 126nM; 15ul | Yuan Gao | Alice Li | 40bp | 6,110,991 | |
June | 4 | Exome | PGP5-1-060809 | 62.5nM; 10ul | BioGem | Alice Li | 36bp | 14,404,283 | 10,812,047 |
June | 4 | Exome | PGP5-2-060809 | 65.7nM; 10ul | BioGem | Alice Li | 36bp | 14,994,770 | 11,253,456 |
June | 4 | Exome | PGP7-1-060809 | 75.5nM; 10ul | BioGem | Alice Li | 36bp | 13,384,832 | 9,712,648 |
June | 4 | Exome | PGP7-2-060809 | 79.7nM; 20ul | BioGem | Alice Li | 36bp | 14,204,382/13,509,137 | 10,519,374/9,961,481 |
June | 8 | BSPP | DF6-9-9_P16(4) | 11nM x 10ul x 2 lanes; | BioGem | Jie | 36bp | 4,688,926 | |
June | 8 | BSPP | foreskin | 15nM x 10ul x 1 lane. | BioGem | Jie | 36bp | 3,320,865 | 1,825,557 |
June | 10 | Exome | PGP1-3-061009 | 34nM; 15ul | Bing Ren | Alice Li | 76bp | 5,802,565 | |
June | 10 | Exome | PGP2-3-061009 | 25nM; 15ul | Bing Ren | Alice Li | 76bp | 3,193,644 | |
June | 10 | Exome | PGP3-3-061009 | 22nM; 15ul | Bing Ren | Alice Li | 76bp | 2,465,788 | |
June | 10 | Exome | NA12878-3-061009 | 22nM; 15ul | Bing Ren | Alice Li | 76bp | 1,285,265 | |
June | 10 | BSPP | NA21070*1_100406_97k | 21.2nM x 14ul; | Bing Ren | Jie | 76bp | 2,682,703 | 424,191 |
June | 10 | BSPP | DF6-9-9_P16(4)_30k | 21.2nM x 14ul; | Bing Ren | Jie | 76bp | 918,811 | 151,519 |
June | 10 | BSPP | foreskin_30k | 21.2nM x 14ul; | Bing Ren | Jie | 76bp | 424,770 | 65,177 |
June | 18 | Exome | PGP5-1-060809 | 62.5nM; 5ul | Bing Ren | Alice Li | 41bp | 4,122,460 | |
June | 18 | Exome | PGP5-2-060809 | 65.7nM; 5ul | Bing Ren | Alice Li | 41bp | 3,907,906 | |
June | 18 | Exome | PGP7-1-060809 | 75.5nM; 5ul | Bing Ren | Alice Li | 41bp | 1,419,496 | |
June | 18 | CES27k9bp_end sequening | Hybrid_1_CES27k9bp | 4.3ng/ul (37nM) x 5ul | Bing Ren | Jie | 41bp | 7,484,832 | |
June | 18 | CES27k9bp_end sequening | BJ_CES27k9bp | 7.2ng/ul (62nM) x 5ul | Bing Ren | Jie | 41bp | 5,643,984 | |
June | 18 | BSPP | DF6-9-9_P16(4)_97k_repeat | 11nM x 5ul | Bing Ren | Jie | 41bp | 4,761,133 | |
June | 18 | BSPP | foreskin_97k_repeat | 7.5nM x 5ul | Bing Ren | Jie | 41bp | 6,683,303 |