Jie:LabNotes/allele specific methylation: Difference between revisions
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>Jie deng (New page: ==1st round ASM validation== ===ASM validation of DNMT3B, LSP1, MATN4, MMP9=== #ASM validation of these four genes on 8 cell lines: refer to LabNotes [http://genome-tech.ucsd.edu/LabNotes/...) |
>Jie deng No edit summary |
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===ASE validation of fuzzyl methylated genes=== | ===ASE validation of fuzzyl methylated genes=== | ||
#ASE validation of fuzzyl methylated genes: refer to LabNotes [http://genome-tech.ucsd.edu/LabNotes/index.php/Jie:LabNotes/CpgSeq/2009-7-2] | #ASE validation of fuzzyl methylated genes: refer to LabNotes [http://genome-tech.ucsd.edu/LabNotes/index.php/Jie:LabNotes/CpgSeq/2009-7-2] | ||
#ASM validation of | #ASM validation of GLIPR1L2_BJ: | ||
#genotype and ASE validation of BJ and BJ-iPS12: refer to LabNotes [http://genome-tech.ucsd.edu/LabNotes/index.php/Jie:LabNotes/CpgSeq/2009-7-25] | #genotype and ASE validation of GLIPR1L2 on BJ and BJ-iPS12: refer to LabNotes [http://genome-tech.ucsd.edu/LabNotes/index.php/Jie:LabNotes/CpgSeq/2009-7-25] | ||
==2nd round ASM validation== | ==2nd round ASM validation== |
Revision as of 18:50, 28 July 2009
1st round ASM validation
ASM validation of DNMT3B, LSP1, MATN4, MMP9
- ASM validation of these four genes on 8 cell lines: refer to LabNotes [1]
- ASE validation of MMP9 on PGP1L and PGP1F: refer to LabNotes [2]
ASE validation of fuzzyl methylated genes
- ASE validation of fuzzyl methylated genes: refer to LabNotes [3]
- ASM validation of GLIPR1L2_BJ:
- genotype and ASE validation of GLIPR1L2 on BJ and BJ-iPS12: refer to LabNotes [4]