Jie:LabNotes/allele specific methylation: Difference between revisions

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>Jie deng
(New page: ==1st round ASM validation== ===ASM validation of DNMT3B, LSP1, MATN4, MMP9=== #ASM validation of these four genes on 8 cell lines: refer to LabNotes [http://genome-tech.ucsd.edu/LabNotes/...)
 
>Jie deng
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===ASE validation of fuzzyl methylated genes===
===ASE validation of fuzzyl methylated genes===
#ASE validation of fuzzyl methylated genes: refer to LabNotes [http://genome-tech.ucsd.edu/LabNotes/index.php/Jie:LabNotes/CpgSeq/2009-7-2]
#ASE validation of fuzzyl methylated genes: refer to LabNotes [http://genome-tech.ucsd.edu/LabNotes/index.php/Jie:LabNotes/CpgSeq/2009-7-2]
#ASM validation of BJ:  
#ASM validation of GLIPR1L2_BJ:  
#genotype and ASE validation of BJ and BJ-iPS12: refer to LabNotes [http://genome-tech.ucsd.edu/LabNotes/index.php/Jie:LabNotes/CpgSeq/2009-7-25]
#genotype and ASE validation of GLIPR1L2 on BJ and BJ-iPS12: refer to LabNotes [http://genome-tech.ucsd.edu/LabNotes/index.php/Jie:LabNotes/CpgSeq/2009-7-25]


==2nd round ASM validation==
==2nd round ASM validation==

Revision as of 18:50, 28 July 2009

1st round ASM validation

ASM validation of DNMT3B, LSP1, MATN4, MMP9

  1. ASM validation of these four genes on 8 cell lines: refer to LabNotes [1]
  2. ASE validation of MMP9 on PGP1L and PGP1F: refer to LabNotes [2]

ASE validation of fuzzyl methylated genes

  1. ASE validation of fuzzyl methylated genes: refer to LabNotes [3]
  2. ASM validation of GLIPR1L2_BJ:
  3. genotype and ASE validation of GLIPR1L2 on BJ and BJ-iPS12: refer to LabNotes [4]

2nd round ASM validation