Kun Zhang: Difference between revisions

From ZhangLabWiki
Jump to navigation Jump to search
mNo edit summary
Line 39: Line 39:
##CpgJan09B OLID 0232541
##CpgJan09B OLID 0232541
#[http://genome-tech.ucsd.edu/LabNotes/index.php/Kun:LabNotes/CpgSeq#Mouse_probes_.28Apr._2009.29 CpgMm9A]  OLID 0236741
#[http://genome-tech.ucsd.edu/LabNotes/index.php/Kun:LabNotes/CpgSeq#Mouse_probes_.28Apr._2009.29 CpgMm9A]  OLID 0236741
#DMR220k: [[Kun:LabNotes/CpgSeq#Human_DMR_220k_probe_set_.28May_2010.29|Information]]
====Mix set====
====Mix set====
#[[Media:ZhangSept09.txt|Sept09, 55k, 140mers]]
#[[Media:ZhangSept09.txt|Sept09, 55k, 140mers]]

Revision as of 04:03, 22 September 2010

Oligonucleotide libraries

ASE

  1. eSNP84k:CircPlex V4
  2. CES22k:CircPlex V6
  3. CES27k:CircPlex V6; Design
  4. CES27k9bp:CircPlex V9; Design
  5. CES18bp:CircPlex V11; Design

Exon capture

  1. E55kv1:CircPlex V7;Design
  2. Cosmic3760:CircPlex V8;Design
  3. E27kv2:CircPlex V10 (Dpn II);CircPlex V10(Nicking)
  4. Dec08:CircPlex VDec08;Design;Jan09 order allocation;Detailed probe information
    1. Jan09 Chip 1 OLID 0225271
    2. Jan09 Chip 2 OLID 0225281
    3. Jan09 Chip 3 OLID 0225291
    4. Jan09 Chip 4 OLID 0225301
    5. Jan09 Chip 5 OLID 0225311
  5. Mar09
    1. Mar09-55k OLID 0232611
  6. Apr09
    1. Jan09-6 (binning set) OLID 0237871
    2. Jan09-7 (binning set) OLID-0237861
  7. Aug09
    1. Jan09-8 (binning set) OLID 0248471
    2. Jan09-9 (binning set) OLID-0253651

BSPP

  1. Cpg28k:CircPlex V8; Design
  2. Cpg30k
  3. cpgJan09
    1. CpgJan09A OLID 0231531
    2. CpgJan09B OLID 0232541
  4. CpgMm9A OLID 0236741
  5. DMR220k: Information

Mix set

  1. Sept09, 55k, 140mers
    1. Baylor-exon-Sept09, Nicking adaptors, 12,370
    2. Baylor-HybridCapture-FlyDup901, Gnirke 15bp adaptors, 2105
    3. CES36k18bp, AP1V6s, 36,456
    4. bisFirstExon, AP1V4, 4069, Primer Info