Nongluk (Noi) Plongthongkum: Difference between revisions

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*[[Noi:Targeted bisulfite sequencing|Targeted bisulfite sequencing]]
*[[Noi:Targeted bisulfite sequencing|Targeted bisulfite sequencing]]
** '''Schizophrenia''' (UCLA, Roel Ophoff):  
** '''Schizophrenia''' (UCLA, Roel Ophoff):  
*** '''Mid-parent offspring (mpo) analysis
*** Sample identity identification by Dinh:
*** '''mQTL analysis'''
**** Homozygous and heterozygous call for X chromosome: [[http://genome-tech.ucsd.edu/LabNotes/index.php/Dinh_2011/NOTES/2011-11-28]]
*** '''ASM analysis'''
**** Genetic distance: [[http://genome-tech.ucsd.edu/LabNotes/index.php/File:UCLA_GeneticDistance.pdf]]
*** Mid-parent offspring (mpo) analysis
*** mQTL analysis
*** ASM analysis
** '''Geographic Astrophy (GA)''' (UCSD, Kang Zhang) Note: most of the data analysis was performed by Dr. Zhang and Dinh
** '''Geographic Astrophy (GA)''' (UCSD, Kang Zhang) Note: most of the data analysis was performed by Dr. Zhang and Dinh
*** Regression analysis: [[Geographic Astrophy]]
*** Regression analysis by Dr. Zhang: [[http://genome-tech.ucsd.edu/LabNotes/index.php/Kun:LabNotes/CpgSeq/2011-10-14]]
**'''HAPMAP project''' (HAPMAP PT01, two families, 1362 and 1464)
**'''HAPMAP project''' (HAPMAP PT01, two families, 1362 and 1464)
*[[Noi:Library construction|Library construction (with Dinh)]]
*[[Noi:Library construction|Library construction (with Dinh)]]

Revision as of 17:05, 21 March 2012

Current Projects

  • Targeted bisulfite sequencing
    • Schizophrenia (UCLA, Roel Ophoff):
      • Sample identity identification by Dinh:
        • Homozygous and heterozygous call for X chromosome: [[1]]
        • Genetic distance: [[2]]
      • Mid-parent offspring (mpo) analysis
      • mQTL analysis
      • ASM analysis
    • Geographic Astrophy (GA) (UCSD, Kang Zhang) Note: most of the data analysis was performed by Dr. Zhang and Dinh
      • Regression analysis by Dr. Zhang: [[3]]
    • HAPMAP project (HAPMAP PT01, two families, 1362 and 1464)
  • Library construction (with Dinh)