Rui:Data Analysis: Difference between revisions

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>RuiLiu
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*[[Rui:RNAseq analysis on HL101|RNAseq analysis on HL101]]
*[[Rui:RNAseq analysis on HL101|RNAseq analysis on HL101]]
*[[Rui:RNAseq analysis on Hiseq111005|RNAseq analysis on Hiseq111005]]
*[[Rui:RNAseq analysis on Hiseq111005|RNAseq analysis on Hiseq111005]]
*[[Rui:RNAseq analysis on Hiseq111005|RNAseq_PGCsamples on Hiseq111005]]
*[[Rui:Hap analysis on HL108|Hap analysis on HL108]]
*[[Rui:Hap analysis on HL108|Hap analysis on HL108]]
*[[Rui:RNAseq analysis on HL109|RNAseq analysis on HL109]]
*[[Rui:RNAseq analysis on HL109|RNAseq analysis on HL109]]

Revision as of 23:31, 19 July 2012

Examples

Jeff's samples:
Kun:LabNotes/Haplotyping/2010-9-17 [1]
Transcriptome:
Kun:LabNotes/SingleCellExpr/2011-6-13 [2]
Haplotyping:
Kun:LabNotes/Haplotyping/2011-6-14 [3]

Data analysis

RNAseq analysis key notes

  • iGenome packages [4]
  1. UCSC genome package: [5]
  2. Ensemble genome package: [6]
  • Comparison of RNAseq analysis programs: [7]